NO25G01640, NO25G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01640 vs. NCBI_GenBank
Match: EWM21667.1 (carboxyl-terminal protease, partial [Nannochloropsis gaditana]) HSP 1 Score: 162.2 bits (409), Expect = 2.400e-36 Identity = 88/161 (54.66%), Postives = 109/161 (67.70%), Query Frame = 0 Query: 1 MFFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAVKEGGRE-EGREGGIGNKYWQVLKG 161 +FFDFANEW+ HTY G G+ +EG LVTDATY++F +V +KEKEG+ R D+LF+G+LEPL+ AL T Y A K L+ L+ QAILARY PES+LRRLALEGDPQVK A+EAVKEGGRE +G+EG +YWQVL+G Sbjct: 133 VFFDFANEWSSKHTYTPGAGV-QEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGREGKGKEG----RYWQVLQG 288
BLAST of NO25G01640 vs. NCBI_GenBank
Match: CBJ29210.1 (carboxy-terminal peptidase [Ectocarpus siliculosus]) HSP 1 Score: 85.9 bits (211), Expect = 2.200e-13 Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 0 Query: 2 FFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAVKEGG 142 +FDFA +W KTHT+ +G +VTD DFK FV K++KEG + + ++ LE L+ L + + EK +E L +AIL+RYLPES++ R L+ DPQ + A+E V++ G Sbjct: 730 YFDFAGQWTKTHTF--------KGTDVVTDGVLRDFKNFVYKRQKEGTYDLAAIYGPQLESLESILEDSNLGHYEKLVEPLPKKLTQEMLTAFDSRKERIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 861
BLAST of NO25G01640 vs. NCBI_GenBank
Match: XP_002295819.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64536.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 80.1 bits (196), Expect = 1.200e-11 Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 0 Query: 1 MFFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAVKEG 141 M+ ++A EW+K H V DATY+DF+++V+K++K+G+ ++++L+ L+ LQ+ L + + +A +ELE LR Q ILARYLPES+L L+ D QV+ + +K G Sbjct: 786 MYSNYAAEWSKHHELT--------DNFKVDDATYKDFQRYVEKRQKDGDIKLEVLYESQLKELQKKLKASKFASASRELEKLRADIIAETKKDFTTYRNEVVEDLEQNILARYLPESMLIERGLKSDVQVEETAKMLKNG 917
BLAST of NO25G01640 vs. NCBI_GenBank
Match: XP_002184343.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44092.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.4 bits (189), Expect = 7.600e-11 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 0 Query: 1 MFFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAV 138 MF ++A EW+KTH + E+ Y +F FV +K+K G+ +D L+S L L++AL + Y AEKE+E L+ Q ILARYLPES+L ++ D QV+AAI+ V Sbjct: 669 MFNEYAAEWSKTHMLTNNFAVDED--------IYRNFIAFVDQKQKTGDIELDALYSRPLSDLKKALKRSGYKGAEKEVEVLQANIVREVQKDFDKYRKDIKEDISQGILARYLPESMLIERGMKNDAQVEAAIKLV 797
BLAST of NO25G01640 vs. NCBI_GenBank
Match: GAX21681.1 (hypothetical protein FisN_29Hh122 [Fistulifera solaris]) HSP 1 Score: 73.6 bits (179), Expect = 1.100e-9 Identity = 43/144 (29.86%), Postives = 74/144 (51.39%), Query Frame = 0 Query: 1 MFFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAVKEGGREE 145 +F DFA W++ H + +V D TY+ F +VK+++++GN ++ L+S L L++ L + Y AEK +E L+ Q+IL+RYLPES+L ++ D QV+AA++ ++ G+ E Sbjct: 580 IFNDFAALWSQNHKLTDYVNADTKKLDVVNDDTYKQFIAYVKEQQQQGNLELESLYSKPLTDLKKTLKQSGYLGAEKSVEQLQARIVRDIESDFNKYRKDLMEDLSQSILSRYLPESMLIERGVQNDVQVQAAMQLLQTPGKYE 723
BLAST of NO25G01640 vs. NCBI_GenBank
Match: GAX14901.1 (carboxyl-terminal processing protease [Fistulifera solaris]) HSP 1 Score: 72.8 bits (177), Expect = 1.900e-9 Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 1 MFFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAVKEGGREE 145 +F DFA W++ H + +V D TY+ F +VK+++++GN ++ L+S L L++ L + Y AEK +E L+ Q+IL+RYLPES+L ++ D QV+AA+ ++ G+ E Sbjct: 605 IFNDFAALWSQNHKLTDYVNADTKKLDVVNDDTYKQFIAYVKEQQQQGNLELESLYSKPLTDLKKTLKQSGYLGAEKSVEQLQARIVRDIESDFNKYRKDLMEDLSQSILSRYLPESMLIERGVQNDVQVQAAMRLLQTPGKYE 748
BLAST of NO25G01640 vs. NCBI_GenBank
Match: EJK46335.1 (hypothetical protein THAOC_34996 [Thalassiosira oceanica]) HSP 1 Score: 72.0 bits (175), Expect = 3.200e-9 Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 0 Query: 2 FFDFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAIEAVK 139 + DFA EW+KTH V + TY+DF++F++K++ G+ ++++L+ L LQ+ L + +D++ +EL+ LR XXXXXXXXXXXXXX Q IL+RYLP+S++ L+ D QV + +K Sbjct: 666 YADFAAEWSKTHELT--------DNFKVDETTYQDFQRFIQKRQDSGDMKLEVLYDLPLRDLQKKLKASKFDSSSRELDKLRADIIKDVKXXXXXXXXXXXXXXXQTILSRYLPDSMVIARGLKNDVQVAETAKLLK 794
BLAST of NO25G01640 vs. NCBI_GenBank
Match: OEU15734.1 (Peptidase_S41-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.6 bits (166), Expect = 3.600e-8 Identity = 45/164 (27.44%), Postives = 81/164 (49.39%), Query Frame = 0 Query: 4 DFANEWAKTHTYVLGEGLGEEGPSLVTDATYEDFKQFVKKKEKEGNFRMDLLFSGSLEPLQEALTVTTYDNAEKELEGLRXXXXXXXXXXXXXXXXXXXXXXGQAILARYLPESVLRRLALEGDPQVKAAI----------EAVKEGGREEGREGGIGNKYWQV 158 +FA++W++ Y L VTD Y +F+ FV+ K K G+ +++ L++G+L+ L+ AL+ + Y ++E+E++ L+ +IL+RY+PES+L + +L+ D QV+ AI + + +G EG G I V Sbjct: 395 EFASQWSQ--KYELTNNFE------VTDDIYREFQDFVEVKVKGGDLKLEALYAGALDDLKRALSQSGYKSSEREVDQLKTQIVKESKNDFEKYKKEIKEDIATSILSRYIPESMLMKRSLKTDDQVQEAIKLLANDKSFSKILAKGSTNEGSNGSINKNSMSV 550 The following BLAST results are available for this feature:
BLAST of NO25G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01640 ID=NO25G01640|Name=NO25G01640|organism=Nannochloropsis oceanica|type=gene|length=825bpback to top protein sequence of NO25G01640.1 >NO25G01640.1-protein ID=NO25G01640.1-protein|Name=NO25G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=275bpback to top Synonyms
Publications
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