NO25G01620, NO25G01620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01620 vs. NCBI_GenBank
Match: EWM21670.1 (carboxyl-terminal protease, partial [Nannochloropsis gaditana]) HSP 1 Score: 110.5 bits (275), Expect = 1.000e-20 Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0 Query: 158 PPSLLQPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVG 228 PPSLLQP+TLFENILLEIDRGYVEEVD KLFE+AVESML++LDPYTE+EG+QLAQDMRE V G G G Sbjct: 288 PPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE-VGGEGRGEG 356
BLAST of NO25G01620 vs. NCBI_GenBank
Match: CBJ29210.1 (carboxy-terminal peptidase [Ectocarpus siliculosus]) HSP 1 Score: 104.0 bits (258), Expect = 9.600e-19 Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 0 Query: 159 PSLLQPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIAGSK 235 P L + +TLFEN+L++ID+GYVEEV+ +L E AV SML TLDPYTEY+ Q A D++E VSGRYGGVGLVI+G K Sbjct: 280 PGLRKSLTLFENVLVDIDQGYVEEVNPERLLETAVGSMLRTLDPYTEYQNNQAAADLKETVSGRYGGVGLVISGGK 355
BLAST of NO25G01620 vs. NCBI_GenBank
Match: XP_002184343.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44092.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 93.6 bits (231), Expect = 1.300e-15 Identity = 44/74 (59.46%), Postives = 59/74 (79.73%), Query Frame = 0 Query: 160 SLLQPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIAGS 234 SL QP+TLFE IL ++++ YVEEVD++KLFE + +ML +LDPYTE+E Q A + E++ GRYGGVGLVIAG+ Sbjct: 210 SLSQPVTLFETILGDLEQAYVEEVDTNKLFETGIAAMLRSLDPYTEFEAAQEAVALTESIEGRYGGVGLVIAGT 283
BLAST of NO25G01620 vs. NCBI_GenBank
Match: CEM05181.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 92.0 bits (227), Expect = 3.800e-15 Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0 Query: 165 ITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIA 232 + LFE IL +++RGYVE+VD+ KLF AV +ML +LDPYTE+E Q A D+RE V+GRYGGVGLVIA Sbjct: 232 VALFETILTDVERGYVEKVDTEKLFNTAVTAMLRSLDPYTEFENLQAASDLRENVAGRYGGVGLVIA 298
BLAST of NO25G01620 vs. NCBI_GenBank
Match: GAX21681.1 (hypothetical protein FisN_29Hh122 [Fistulifera solaris]) HSP 1 Score: 91.3 bits (225), Expect = 6.400e-15 Identity = 40/73 (54.79%), Postives = 60/73 (82.19%), Query Frame = 0 Query: 161 LLQPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIAGS 234 LLQP+TLFE IL ++D YV+ VD+ +LF+ +++ML +LDPYTE+E ++ AQ++ E++ G+YGGVGLVIAG+ Sbjct: 127 LLQPVTLFETILSDLDSTYVDPVDTQQLFQTGIQAMLQSLDPYTEFEAKEEAQNVMESIDGKYGGVGLVIAGT 199
BLAST of NO25G01620 vs. NCBI_GenBank
Match: XP_002295819.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64536.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 90.9 bits (224), Expect = 8.400e-15 Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 0 Query: 163 QPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIAGS 234 QP+ LFE IL +++ YV++VD KLFE V++M ++LDPYTE+E +Q AQD+ E+VSG+YGGVGLVI GS Sbjct: 285 QPVILFETILNDLNDAYVDDVDIQKLFETGVKAMTSSLDPYTEFESRQEAQDLEESVSGKYGGVGLVIRGS 355
BLAST of NO25G01620 vs. NCBI_GenBank
Match: OEU15734.1 (Peptidase_S41-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 87.8 bits (216), Expect = 7.100e-14 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0 Query: 167 LFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIA 232 LFE IL ++DRGYV+ VD++KLFE V +ML +LDPYTE+E ++ AQ M E + GRYGGVGLVI+ Sbjct: 2 LFETILADLDRGYVDPVDTNKLFETGVSAMLRSLDPYTEFEAREEAQQMNEGIMGRYGGVGLVIS 66
BLAST of NO25G01620 vs. NCBI_GenBank
Match: EJK46335.1 (hypothetical protein THAOC_34996 [Thalassiosira oceanica]) HSP 1 Score: 84.7 bits (208), Expect = 6.000e-13 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 163 QPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIAG---------SKPLVEKGSIVKKGGKE 250 QP+ LFE IL +++ YV++VD KLFE V++M A+LDPYTE+E + A ++ E+VSG+YGGVGLVI G P+V ++ GG + Sbjct: 134 QPVILFETILNDLNNAYVDDVDIQKLFETGVKAMTASLDPYTEFESRTEAMELEESVSGKYGGVGLVIRGGMNLGDDEDDTPIVNNIEKIETGGSQ 229
BLAST of NO25G01620 vs. NCBI_GenBank
Match: GAX14901.1 (carboxyl-terminal processing protease [Fistulifera solaris]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 38/74 (51.35%), Postives = 59/74 (79.73%), Query Frame = 0 Query: 161 LLQPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYE-GQQLAQDMREAVSGRYGGVGLVIAGS 234 L QP+TLFE IL +++ YV+ VD+ +LF+ +++ML +LDPYTE+E ++ AQ++ E++ G+YGGVGLVIAG+ Sbjct: 142 LFQPVTLFETILSDLETTYVDPVDTQQLFQTGIQAMLQSLDPYTEFEANKEEAQNVMESIDGKYGGVGLVIAGT 215
BLAST of NO25G01620 vs. NCBI_GenBank
Match: XP_005705375.1 (carboxyl-terminal processing protease isoform 2 [Galdieria sulphuraria] >EME28855.1 carboxyl-terminal processing protease isoform 2 [Galdieria sulphuraria]) HSP 1 Score: 79.3 bits (194), Expect = 2.500e-11 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0 Query: 161 LLQPITLFENILLEIDRGYVEEVDSSKLFEAAVESMLATLDPYTEYEGQQLAQDMREAVSGRYGGVGLVIAGSKPLVEKGSIV 244 L Q + LF IL +I R YVE+VD KLFE V +ML +LDPYT++E AQ+M GRYGGVGLVIA K + +K I+ Sbjct: 135 LEQKVALFNIILEDIQRAYVEKVDVDKLFETGVNAMLGSLDPYTQFENHIEAQEMNVKAMGRYGGVGLVIA--KDIRDKDQII 215 The following BLAST results are available for this feature:
BLAST of NO25G01620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01620 ID=NO25G01620|Name=NO25G01620|organism=Nannochloropsis oceanica|type=gene|length=1334bpback to top protein sequence of NO25G01620.1 >NO25G01620.1-protein ID=NO25G01620.1-protein|Name=NO25G01620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bpback to top Synonyms
Publications
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