NO25G01530, NO25G01530 (gene) Nannochloropsis oceanica

Overview
NameNO25G01530
Unique NameNO25G01530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length896
Alignment locationchr25:438297..439192 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:438297..439192 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL044nonsL044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR072ngnoR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01530.1NO25G01530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01530.1NO25G01530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01530 ID=NO25G01530|Name=NO25G01530|organism=Nannochloropsis oceanica|type=gene|length=896bp
GGGGGAGGGAGGGAGGGAGGAGGCGCCGAGGATATGGTCGTCGTACTCGA
GGGGATATCGGAGGGAGGGTGATGCAGTGTGGGTGGCGGGAGAGGTGAAG
AAAGTTTTGCGGGAGAGAGGGAAGGAGGAAGGGGGGGAGGGAGGGCTAGA
GGTGTTTCCTTGTCCGTCGGCTGACGTGATAATGACCAAGGCCCTCGAAG
CCGTCTCAGGCCCAAGTGGGGGGGAGGGAGGGAGGGAGGGAGGGGAGGAG
GGCAGTATCCACCAGCAGCCCGATCTTTTGTGGCTAGACCTGCCCTTCCG
CGATTACTACTCCCCTTTGGAACCCCCTCCCTTCTCTACCCCCTCTTCGT
CCTCCCCCCCTCCCTCCCTCCCTCCCAGCCCCAAGCACTTCACCAGCCTC
GCGCGAATAGATTGTTTTTTAAGGCAGCTCATGGAAGGCGCGAAGGAGGG
CACTGTCCTCCTTCTCGCTCTCCAGGGCGACCTTTACCCTGTGTATGACC
TGATGGAAGCCAAGCAACGCTGTCGGTGGGACACTCCCTCCTCTTCCTCG
TCCTCGTCCGGGCCTCAGCACGTAGCGGGGACGATTCGAGCGCCTTGGAC
GGAGGAAGACGAACGCTCACTTGTGGCGCATGCGGCAGATGCGTTGAACG
GTGTGGTGCTGATGGGGGTGAAGAGAGGGAGGGGGGGAGGGAGGGAGCGA
GGGAGGGCAGGGCGAAGGAAAAACAAGTCAAAATGAACATGTGAAATAGA
ACGATAGGGAGGAAATGTATTTTCGGTGGTAACTTCAGAGTCTTTGAAAG
ACACAGAACACATATGGGATGGAAAGAAAGGGAGGAAGGGAAAGCATTTC
AAAGTAACAACAGCAGTGTAATCAAAGCACCATTGATGAAAGCGAA
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protein sequence of NO25G01530.1

>NO25G01530.1-protein ID=NO25G01530.1-protein|Name=NO25G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=185bp
MTKALEAVSGPSGGEGGREGGEEGSIHQQPDLLWLDLPFRDYYSPLEPPP
FSTPSSSSPPPSLPPSPKHFTSLARIDCFLRQLMEGAKEGTVLLLALQGD
LYPVYDLMEAKQRCRWDTPSSSSSSSGPQHVAGTIRAPWTEEDERSLVAH
AADALNGVVLMGVKRGRGGGRERGRAGRRKNKSK*
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Synonyms
Publications