NO25G01490, NO25G01490 (gene) Nannochloropsis oceanica

Overview
NameNO25G01490
Unique NameNO25G01490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4022
Alignment locationchr25:426461..430482 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:426461..430482 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL044nonsL044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR072ngnoR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004247NSK004247Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01490.1NO25G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01490.1NO25G01490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01490 ID=NO25G01490|Name=NO25G01490|organism=Nannochloropsis oceanica|type=gene|length=4022bp
GGCACAAGGGAAGTCGGATTATTTTCTTTTGGAAGAAAGGTCGAAAAGTG
TCTTGCTTTGTCTCGCTTGCCTGAGATTCATGCCATGAACGAGCATATGC
ACTACTGTGGTCCTCTCCTATCGAGCCTACTTGCTGCATTTATGTTCAAC
AAAAAAATTACTTCGGACAGTCGTATCAAAATCTGAGGCATGGAAATACA
TCATGGAGTAGACCATTTGAAGCCCAAACGAGGACTGTCTTGCATGAATA
CGGCCGCCGGAGTAAGTGCTGTATTGCGGGTGGATCGGAGACGAGCCTCC
GACCCAGTCCACGCGCTAAAGAGGCGGCCGCCGTTCCCTCGCTGCACACC
CCAGCCCGTGGATCCGCCGAGGCCCAATCACGAAATTGAAGTTCTATTGA
ATACCCAGCCCCCGGTCTCGACGCCCCTCCTCCCTCCCCCCGACCTCTTA
CCTCTCCACCTCCTTCCCCACTCTGACAGCTGCAAAGTCATCGAAATAGT
CATTGCAATGTAACTGAACGACTTCACAACATGCCGGACTTCGGAAAGTG
TCTACCAGAGCCCATCGTCATGTCATATTTACCGAAGAAAGGTCACACAC
ATATCCTCCCCCCTCCCCACGCAAGTCCGACAAAGAATAGTGAATAAACA
AAACAGTAGCTATATTTGGATATGTTCCCTTATCTGTAGAGGTACATGCC
AAAGACAGGTCGGTCCAGATTGTAAATGGACGAACCAGAGGCTGTTGCTG
CGGCTATGCCCTCAACATGGACATAATTGTACACCACCTGAACCAAAATT
AATGATACTCTGGGCCCTAAGTGCACCAAGAATTTAAAAGGTACATAGAG
ATGGTAATTATCACGACAGCGCACGCCCTGAGGCATTAGTGGCTAGTGTT
CGGTATTGGCTTCTTCGGGTGGCGGCATTTGTCATTTTGATTGCTCTGTT
TTCGGGGCAAAGTGCGGAAGGTTATGAAAAGTGACCTTCACAGTCTACCA
TCACATGCAAATAAAGTTTCATATCTTCCATGATCTTCTAGCCGGTTCCG
TCCTTCGCGGGTGCCTAAAATCGGCAATACCTTCTTTTGGATCATCCACC
CATCGCCTTTCTCACGATATGGCTTACGCTCCCAGACAACCCTCTCGTGT
ACAACAATGGGCGGCCCGTGTGACCTAACCGAGGCAATCGCGGGCATAAA
AACACGTGGGTCCCAGCTATTGATGCTGTTGGACGCTGTTCAACAAGAGC
AGGCCGCGGCCGAGGCCGAGGCCGAGGCGGCTGCTACTAAGACCGCGAGA
GGAGACGACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGAA
GCAAGAAACTGAATCGAAGAAACCTCTAGTACAGAGTCATGCGGCCGTGG
CTCGAGACTTCATCGCACATCTCGTCAACTTTGTGGAGGCGATAACGGGG
CAGCAAGGTGACACTAGCATGGCCTCCTTGGTCTTCCCCTCCCTCGCCCT
CCCCTCGTCCGGTCATGCTGACCATCAGCAGCAGCAGCAGGAAGTAAGAG
GAACACCCTCGACGTCCCTTCATTCCGTCCTCTTTCCCCTTCTTCCCATT
CTTGTCTCTTCATTTCAAGCAGCCCTCCAAGCCTCCTCCTCTTCCCTCAG
CCTGGCCCGCAACACCACGAATAGATCCGCGGATGCTATCAGCAGCAGCA
ACAACACCAATAGCAGCAACAGCAGCAGCATTAGCTTTCGTCCTGCCTCC
CCTCGCCCTGGCAGCAGCAGCAGCGCCGGGGAAGAGACGGTTCCCAGTGC
AATACTGACGAAGAAAAAGAAGTACACCCAACCGCCTTCGGGGATAAACC
TTCTGCTCGCCCGTACAGACATCCCTCCGTTCTGCCCCATCGCCCCCCTG
ACCATCCCTCCCCTGGGGGAGGGGGAGGGAGCGGGGGGGATAGGGTGGGA
GGGAAGGTCGGAGGCAGTGGAGAGGGTGAGGAAGGTGTTGAGTTTTTTGG
TGGAACGAGGCTTGACGGGCGTGGATTCAGCAGTGGAGGTGGCGCATGCC
ATCTTGCACGCTGAGCGGTATTATGAAAAGTACCATAGGgtgcgtctttc
tgttcttccctcttctataattatacacacacattttctatctcacttac
actccttcacttatcctcattttctctccctttcacccctcctctctctc
acttacggcacccacccccgtccacctcctctcatcacctcccaagGCCA
TCAACGTCCAGGCCTGGAAGGAGGGCTTGCTGCTGCTCGATTCCGCCACC
GTAAGGAAGAGTGTTAGCAATCTCCTCGAGGCGCTCTTGAAGGAGGTGAG
GAAAAGGAGTACGTGTAAACGGTATGCCAAGACTGAACAGGCGAGAATGG
AAGCGCTGAGGAGGGAGAGAGGGAAGGAGGGAGGGAGGGAGGGAGGGTGG
GTGGAGGGAAAGGTGGGAGACGAGAAATTGGAGGTGGTGGGGAAAGAGGG
AGTGAGGGGAAAAGCAGTGGAGGAGGAGGAGGTGGAGACGGAAGCTGAGT
TAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAAAGGGAAAGGAGGAGAAG
GAGGAAAAGGAGGAGGAAGATGAGGAGAAGGAGGAGGAAGAGGAGAAGGA
GGAGGAAGAGATTATAGGCAATGCGGAAGGAGGAGAGGAAGAAGAGAGCA
AGGTTAGCGGGGAGGGAGAATCTTCGCAGGAGAAGGAAAAAGAGGGAAAA
AAGGAGGAGGAGAAGGAAGAGGTGGCAGTGAAAATGATTGGTGGCGCGGC
CGCTGCGAAGGGACCCAGTAAGTTGGAGTTGAAGAAGAGGAAGAGCACGG
GAACGAAAGGAGGGGAGGAAACAGTGGTGGCGGTCAAGAAAACGAGGATT
AAGATGAATAAGGAGAGCCAGAAGGACGAGAAGGGTGAACGATTGGAGAA
AGGGAAGGAGAAGAGGAAGTCAGCGGAGGAGGAGAAGAATGAGGACAGTG
TGATTAGCGAGGGGAAACAGCGGCAGCAGCAGCAGGACGAGTCAAGCAAA
GTGCTGACGACCACGGTTACGACTGTGGGAGCTAAGAGGAAGAAGAAGGA
GAAGGCAGCGTCGACTTAAAAGGTCATGCTTGCAGGAGAAGGACAAGGAG
AAGGAGGAGATGAAGGTGGAGGGAAAAGGACAATTGCCGTGGAGCAGCGG
CAGAAGAAAGAAAGGGAGCAAACCACCAGCACTGCTGCTTCTTCGCCCTC
CCCTCCCCTTCCCCCATCCGCCTGGAAATAACACTTCTGAGCCTGAGAGA
CCCATTATGTCTGCGCGCGGGTGAGATTCTCGTTGTGTTGCTACACACAT
ACAAAGACACACACAGAGACAAAGAGGGAGGGGGGAGATAAAGGTGGAGA
GGAAGAGAGAGAAAAAGAAAGGGGAGGGAGGGAGGGGCACGAAAGAGGGA
GAGAGAGGGAGAAATCAAGTAGGGAGAAGGACGAGAGAGGAAGACCAGAG
AGCAGAAGAATCCGATGACAGAAAAGATGCTTTGATCAGAAGAAATAGAA
GCTTATAAAGGGAGAACGAAACAAAACTTGTGTGCGTGTGTGTGGCGTGC
GTTATTGTATAGATATTTATTCTTAATTTTTGTTGCCAGCCTGTTATATT
CCCCTCCTTCCTTCTCTCTATCTTTCGCTGCTGCTGCTGCTGCTGTTGAC
ATCTGTCTGTGCTTTAGTGCTCGGTCGATCTCTTTTTCGTTTTTCGTTGG
CGTCGACTCGTTTGTTGTTGCAGCTATTTCCTTCACCATCTTGTTCCTCT
TTTTCACCCCGGGTTCCCTCCCTCCCTTTATATCGGTTTCCTGCCTCTGT
CTCGATCTCCGTCTGTCTTTGAATGTAAATTTCTTGTACCCTGTACTCGG
CTGGTGTTTTCCCTCCACCTCTTTCATAATTCCTTGCTGCTGCTGCTATA
TGATATATATGTCATAATTCCTTGCTGCTGCTGCTATATGATATATATGT
CATAATTCCTTGCTGCTGCTGC
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protein sequence of NO25G01490.1

>NO25G01490.1-protein ID=NO25G01490.1-protein|Name=NO25G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bp
MGGPCDLTEAIAGIKTRGSQLLMLLDAVQQEQAAAEAEAEAAATKTARGD
DGGGGGGGGGGGGRKQETESKKPLVQSHAAVARDFIAHLVNFVEAITGQQ
GDTSMASLVFPSLALPSSGHADHQQQQQEVRGTPSTSLHSVLFPLLPILV
SSFQAALQASSSSLSLARNTTNRSADAISSSNNTNSSNSSSISFRPASPR
PGSSSSAGEETVPSAILTKKKKYTQPPSGINLLLARTDIPPFCPIAPLTI
PPLGEGEGAGGIGWEGRSEAVERVRKVLSFLVERGLTGVDSAVEVAHAIL
HAERYYEKYHRAINVQAWKEGLLLLDSATVRKSVSNLLEALLKEVRKRST
CKRYAKTEQARMEALRRERGKEGGREGGWVEGKVGDEKLEVVGKEGVRGK
AVEEEEVETEAELEEEEEEEEEEKGKEEKEEKEEEDEEKEEEEEKEEEEI
IGNAEGGEEEESKVSGEGESSQEKEKEGKKEEEKEEVAVKMIGGAAAAKG
PSKLELKKRKSTGTKGGEETVVAVKKTRIKMNKESQKDEKGERLEKGKEK
RKSAEEEKNEDSVISEGKQRQQQQDESSKVLTTTVTTVGAKRKKKEKAAS
T*
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Synonyms
Publications