NO25G01270, NO25G01270 (gene) Nannochloropsis oceanica

Overview
NameNO25G01270
Unique NameNO25G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1323
Alignment locationchr25:356251..357573 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:356251..357573 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01270.1NO25G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01270.1NO25G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01270 ID=NO25G01270|Name=NO25G01270|organism=Nannochloropsis oceanica|type=gene|length=1323bp
ATGATGGGAGGAGCACCGCACGACGAGAACAAAGTTAACTGCCTGTGGGA
GAGCACGGGTTGCCTGCGAGGAAACAGAAAGCTGGCACgttggtctgcgt
gctctgtgcggtgggtggcttgacagctgagtgagacagggtcgtaagct
ggactcccgttgtagtagtgcatttcgaaaggtggtgtaacggctccagt
caaggagcctttagagtcctgcccctgctttcgaggttgggtgatgggga
aaaaacaggtcggcccggagggtacacattgaatccttatccatctaaga
aaggacgtatcatgctgtgagcttgaccagataacttttgtccttaaaaa
ggtcctatgatcatttgctctctttacccggagaaaaggcaacaagagca
ctagcaaccattgctagaattcgtgcggcacttgcaagaggaagggacaa
gggaaagagaaagatagtgagggcgctccgacgaggaggaagTGGGGGAG
GGGAAGGAGGGGGAAGACGAGGGGAAGGACGAGGGGAAAGAGGGGCACGA
GGAGGAGGAGGAGGAGGAGGTGGACGAGGAGCAGGAGGAAGGGGTGGACG
AGGTGGACGTGGGGGAGGAGGGGGGGGGAGGAGAAGGAGGAGAAGAAGAG
GAGGAAGAAGAAGAGGAGGAAGAAGACGAACAAGAAGAAGAAGAAGAAGA
AGAAGAAGACGAACAAGAAGAAGAAGGAGGAGAGGAAGAAGTAAAAGAGG
AAGAAGGAGAAAAAGAAGAAGATGATGATAAAGAGGAAGAAGAAGAAGAA
GAAGAAGAAGAGGAAGGAGAAGAAGGGGGAGGAGGAGGAAGGGGAGGAGG
GAGACGAGGAGGGGGTGGAAGGGGAAGGGGAGGAGGAGGAGGAGGCGGTG
GAAGCAGAGGAGGAGGGGGGAAGGAGGAGGTGGAGGAGAAGGGGGAGGAG
GAGGAAGGGAAAGGGGAGGATGGGGCGGAGGCGGTGGAAGCAGAGGAGGA
GGAGGCGGAGGCGGAGGAGGAGGAGAATGCGGAGGAGGACGAGGCAGAGG
AGGAGGAGGAGGTCATGGGCGGGCCATCCGAGGACTGTGTTGGTGTGACA
CCTGTAAACAgttcgtgtccctggacggcagtagggcacgtaacatcctg
cgggtgtacaggagtatggtccgtggagaagctcgtccccgtgatcttcg
gtttggtcaaccgcggcaagatatggggacactctatgtgtagCGTTCCC
GCTGACATCCTCTCTTATCCTCCTCTCCTTTCTCCTCCTGGCCCTGTGTG
GGCCGTCCGGGGACTTGGCCTGA
back to top

protein sequence of NO25G01270.1

>NO25G01270.1-protein ID=NO25G01270.1-protein|Name=NO25G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bp
MMGGAPHDENKVNCLWESTGCLRGNRKLALGEGKEGEDEGKDEGKEGHEE
EEEEEVDEEQEEGVDEVDVGEEGGGGEGGEEEEEEEEEEEDEQEEEEEEE
EDEQEEEGGEEEVKEEEGEKEEDDDKEEEEEEEEEEEGEEGGGGGRGGGR
RGGGGRGRGGGGGGGGSRGGGGKEEVEEKGEEEEGKGEDGAEAVEAEEEE
AEAEEEENAEEDEAEEEEEVMGGPSEDCVGVTPVNTFPLTSSLILLSFLL
LALCGPSGDLA*
back to top
Synonyms
Publications