NO25G01250, NO25G01250 (gene) Nannochloropsis oceanica

Overview
NameNO25G01250
Unique NameNO25G01250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3329
Alignment locationchr25:347310..350638 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:347310..350638 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO25G01250 vs. NCBI_GenBank
Match: EWM21644.1 (hypothetical protein Naga_100012g13 [Nannochloropsis gaditana])

HSP 1 Score: 755.4 bits (1949), Expect = 2.300e-214
Identity = 498/979 (50.87%), Postives = 587/979 (59.96%), Query Frame = 0 
Query:    7 SGQDWAADFWPLTTGASTDTFSNIMGASTTSSPGMLQQEQHPLGQATFEXXXXXXXXXXXXXXXXXRTVGTGLTLGRLDLLGQKVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGSDTARKDRSNVLKAYLMDVGCTKIRGARKRRKNDEGEFEGGKVDWDSEWVQEQLVIPLEEFNAIRLDYERRSKEKKLADATIERDWVTKDGSRIPKAKMLKNYYPTNLILHRFFDLMYGRLLRAQPISASVEEQMQSINPFLKTRPLAVFLLPMRGADDKEGGGNLKMFREGISRSDPMVMNYSWEKDVIEIDGRYGWEEQRAVLARPNLRAVTYLDELLVKGVAEKLRVGVELTTLWLSAFEKWGARGEDEGMGEIGEVREVDLAVFLSCFSEELRGTLRYLLCGPYEYKQTVTIEEFQAFFVWAAGLTGKAASIKVQLAALVACLKRTEGE-GREIGRENICMYITTRKAKELKRPGDFYLRASNTQPGWIALEYIPPFPSSPPTSGVGPTGAGFKIE-GVSNSSCIQTSLFYFEVTTVNEKCRLTFIDRHESHPNITSLILKHTGSDTWARLRQCAAIRAPVLPPPLPSPATTKELMLGMMGGMNHMMATPFGAVSELSPHRRQQYDHNGSNSSSNAGGYSHSSGCKVVSATQGLKVDGAGMLMPSPVQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDSLGLPPCLSNLDLHHSFGIGPSWCSIDYPAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQACQTVQLQQHPVHSPAHLRADGLRGEGAGKAALLVAVGEAAGAALTTTSDSLGLSTDHKAAVVAA--AGGMGEGMEGGVXXXXXXLFRYSRGAASLDRLQQQGGELEDPFPLQDFLVSSSSSFGSLGLSSSMPATPAGGEGGGLEGGAWAGNRFFSVDQLIKGVE 982
            +GQDWAADFWPLTTG STDTFSNI+G STTSS  +     +   QATF                  R VGTGLTLGRLDLLGQKVVA XXXXXXXXXXXXXXXXXXXXXXX     RRGSDTARKDRSNVLKAYLMDVGCTKIRGARKRRKND+GE+EGGK+DWDSEWVQEQLVIPL+EF +IRLDYERRS+EKKL DATI RDWVTKDG  +PKAKMLKNYYPTNLILHRFFDLM+GRLLR+ PI+  VE+QMQSINPF+++RPLAV L       D++G G L++FR  +SR+DP+V+NY  EK+ +EIDGR+ + +Q AV+  P LR V Y D++LVKGVA +LR G EL TLW SAF K        G  +    REVD+ +FLSCFSE+ R TLRY+L  PYE+K TV++EEFQAFFVWAAGLT    SI+ QLAALVA LK    +  +   RENIC+YITT KAK L++PGDFYLR S TQ GWIA+EY+PPFP S     VG      K E G   S+ I+TSLFYF+ + VN    +TF DR  +HP+I SLILKHTGSD W RLRQCA     + PP        KE + G   G   M+ATPFG +SE SP  R       S+SS  + G  H +  K+V ATQ +K++G+ M+ PS  +R                               S+D+LG+ PCLS LD  HSFG+GPSW S D+                                                                                     Q   HPV    HL AD +       + L +   +         +D L L       VV A  AGGM +GM  G       LF   R A   DRLQQQGG L+DPF LQDFLVSS+SSFGSLGL SS PATPA    G         NRFF +DQ++ GV+
Sbjct:    5 TGQDWAADFWPLTTGVSTDTFSNIVGTSTTSST-LHHHNGYGQEQATFN---SHYIMHHETQQQPVRAVGTGLTLGRLDLLGQKVVAAXXXXXXXXXXXXXXXXXXXXXXXSSETKRRGSDTARKDRSNVLKAYLMDVGCTKIRGARKRRKNDDGEYEGGKLDWDSEWVQEQLVIPLQEFASIRLDYERRSREKKLTDATIGRDWVTKDGVCVPKAKMLKNYYPTNLILHRFFDLMHGRLLRSHPITPDVEDQMQSINPFVRSRPLAVIL------PDEDGQGGLRLFRGYVSRTDPLVVNYHHEKEHLEIDGRFSFADQSAVIVHPGLRPVDYFDDVLVKGVARRLRAGFELVTLWYSAFGK-------PGQADEAGPREVDVDLFLSCFSEDFRSTLRYMLLAPYEHKTTVSLEEFQAFFVWAAGLTDNPLSIQDQLAALVAGLKMKPAKVEKGFPRENICVYITTNKAKPLQKPGDFYLRTSTTQAGWIAIEYVPPFPLSRAADPVG--RISMKTETGSKCSAAIKTSLFYFQASVVNGVAHVTFTDRTGTHPSIASLILKHTGSDAWGRLRQCANFHTALSPP------AGKESVPG--HGPQGMVATPFGHISEPSP--RMNAGGMYSSSSDTSNGIGHRAN-KMVVATQNIKMEGSQMITPSRGRR--------NKHRQQSQPYEAAPQGSSSRHQSSIDTLGMAPCLSGLDFSHSFGVGPSWRSTDHHLSPQAASEQAAGQLQALPYRQEHFQGSLPAKEQLQGHSQTYQPKPEERFQGRAQAYDVQQASVPHLLND---------------QSLLHPVQLEEHLPADVMSQSQPQSSPLGLEPAQ-------VQTDCLLLGGGQGELVVPAMGAGGMEDGMALG-----GTLFCPPRPA---DRLQQQGG-LDDPFVLQDFLVSSTSSFGSLGL-SSFPATPAQALEGXXXXXXXXXNRFF-MDQIMSGVD 912
The following BLAST results are available for this feature:
BLAST of NO25G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21644.12.300e-21450.87hypothetical protein Naga_100012g13 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004306NSK004306Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01250.1NO25G01250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100012g13gene8787Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01250.1NO25G01250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01250 ID=NO25G01250|Name=NO25G01250|organism=Nannochloropsis oceanica|type=gene|length=3329bp
ATGGAGCTTGCGTTGGCCTCGGGCCAGGACTGGGCAGCCGACTTTTGGCC
CTTGACGACGGGTGCCTCCACAGACACGTTTAGCAATATTATGGGGGCAT
CCACCACCTCGTCCCCTGGCATGCTCCAACAAGAGCAGCACCCCCTGGGC
CAAGCCACCTTCGAGCAGCAGCAGCAGCATCAGCACCACCAGCACCAGCA
ACCGCCGCCAGCTATGCGCACGGTGGGCACAGGCTTGACGCTGGGACGGC
TGGATCTCCTAGGTCAGAAGGTAGTCGCGGCATCCAGTTCTACCAGCACA
GCCTCCACCACAAACACCTACACCCCGCAGCCGTCCCCGTCGCCGGGCAG
AAGCACTGACACCAAGCGTCGGGGGAGTGATACAGCGCGGAAGGATCGGT
CTAATGTCCTCAAGGCCTACCTTATGGACGTGGGATGCACCAAGATTCGG
GGCGCTCGGAAACGAAGGAAGAATGACGAGGGGGAATTCGAGGGTGGGAA
GGTGGATTGGGACAGCGAGTGGGTGCAGGAGgtatgcatgtgtggggagg
gagaaagggaaagagcatgtgggtggcgggtatctaattgtggtgctgcg
gcgtgctcatccttaattccttatctcactcaaatctatgattactcacc
ctatttttctcgcatttcctcatgtttacttacgtacagCAACTCGTCAT
TCCCCTGGAAGAGTTCAACGCCATTCGCCTGGACTACGAGCGCCGCTCAA
AGGAGAAGAAGCTTGCGGATGCTACgtaagaaccgtcacttttttgcaat
acatctacccgaaggagggaatgattatggccctcatttcttttgtgttt
aatgtgctagcaaccctcccccagtctcggtttctctccttgcgttgcca
agacatacaagcttactccctccccatcctcccacattccttttctccgc
agGATTGAACGCGACTGGGTCACAAAAGATGGGTCCCGGATCCCCAAAGC
CAAGATGCTGAAGAACTACTATCCTACCAACCTGATCCTCCATCGCTTCT
TCGACCTCATGTATGGTCGCTTGTTACGGGCGCAGCCGATAAGTGCCAGT
GTCGAAGAGCAGATGCAGAGCATCAACCCCTTTTTGAAAACCCGGCCTTT
AGCTGTATTTTTGCTCCCTATGCGTGGGGCGGATGACAAGGAGGGAGGGG
GAAACTTGAAGATGTTTCGGGAGGGTATAAGTAGGTCGGATCCGATGGTG
ATGAATTACTCATGGGAAAAAGACGTGATAGAGATCGATGGACGATATGG
ATGGGAGGAGCAGAGAGCGGTGCTGGCGAGACCGAACTTGAGGGCGGTTA
CTTATTTGGATGAGTTGCTAGTGAAGGGGGTGGCGGAAAAATTGAGAGTG
GGGGTCGAATTGACGACTTTGTGGCTGTCGGCGTTTGAAAAGTGGGGGGC
ACGGGGGGAGGATGAGGGGATGGGGGAGATTGGGGAGGTCAGGGAGGTAG
ACTTGGCGGTGTTTCTGTCATGTTTTAGTGAGGAATTGCGGGGGACGTTG
CGGTACTTGTTGTGTGGGCCGTATGAGTATAAGCAGACTGTGACAATCGA
GGAGTTTCAAGCGTTTTTTGTATGGGCCGCAGGATTGACAGGGAAGGCGG
CTTCCATCAAAGTGCAGCTGGCGGCGCTCGTGGCGTGCTTGAAGCGGACG
GAGGGGGAAGGAAGGGAGATTGGGAGGGAGAATATTTGCATGTATATCAC
GACAAGGAAGGCGAAGGAGTTGAAGAGGCCTGGGGATTTTTACTTGAGGG
CGTCGAACACCCAACCCGGTTGGATCGCTCTTGAGTACATACCACCCTTC
CCTTCTTCCCCCCCTACCTCAGGGGTGGGGCCGACGGGTGCAGGTTTTAA
AATAGAAGGAGTCAGCAACAGCAGCTGCATTCAGACGTCCCTATTTTACT
TCGAAGTAACGACAGTGAACGAGAAATGCCGATTGACGTTCATTGACCGA
CACGAGTCGCACCCAAACATCACCTCCCTGATCCTCAAGCACACGGGCAG
TGACACCTGGGCCCGTCTTCGACAATGTGCTGCCATTCGAGCCCCTGTTC
TTCCTCCTCCCCTTCCTTCCCCGGCTACGACTAAGGAGCTGATGTTGGGA
ATGATGGGAGGCATGAATCACATGATGGCCACGCCCTTTGGGGCCGTGTC
GGAGTTGAGCCCCCACCGTCGACAGCAGTATGATCATAATGGTAGTAACA
GCAGTAGCAACGCTGGTGGATATAGTCACAGTAGTGGTTGCAAGGTGGTG
TCTGCGACGCAAGGACTGAAGGTAGACGGAGCGGGCATGCTGATGCCCTC
CCCCGTACAGCGTAAGAAGCTAAAGATGCAGCAGCCGCAGCAACAGCAGC
AGCAGCAGCCGCCGCAGCCACAGCACCATCATCGGTCCTCTTCTCGTCGT
CGTGAGAGTCTAGATAGCCTGGGTTTGCCTCCTTGCCTTTCCAACCTTGA
CCTCCACCACTCTTTCGGCATCGGTCCCTCGTGGTGTTCGATCGACTACC
CCGCCGAGCAGCAGCCCCAGCAACAGCAGTCCCAGCAGCAGCACCACCAG
CAGCATCAGCAGCACCAACAACAATCAACAGTTCCTCACTCCAAGGGATT
GTTAGTACAGCAGCTGCAGTACCAGCGACAACAGCAACAGCAGCCGCAGG
AGGCCGCACAGCTAAGCTCGCTCCCTGCCCTCCCCAACCGGCAACAGCAG
GAGCAGCAGCAGGATCATCATCTGCTTCACCCACAGCAGGCGTGCCAGAC
TGTTCAACTTCAGCAGCACCCTGTCCACAGCCCTGCCCACTTGCGTGCTG
ATGGTCTCCGGGGTGAAGGCGCAGGAAAAGCAGCGCTGTTGGTTGCTGTG
GGAGAAGCAGCAGGAGCAGCGCTGACGACGACCTCAGACTCTCTGGGGTT
GAGCACCGATCATAAAGCAGCAGTAGTCGCAGCAGCAGGAGGAATGGGGG
AAGGAATGGAGGGAGGGGTGGAAGGGCTGGAGGGAGGACTTTTCCGTTAT
TCCCGGGGTGCAGCGTCTTTGGATAGGCTGCAGCAGCAGGGGGGAGAGTT
GGAAGACCCTTTTCCATTGCAAGACTTCTTGGTATCCTCCTCGTCTTCCT
TCGGCTCCTTGGGCCTCTCTTCCTCTATGCCTGCTACCCCGGCAGGAGGA
GAAGGAGGGGGTTTAGAAGGAGGAGCATGGGCAGGGAATCGTTTTTTCTC
GGTAGATCAGCTTATAAAAGGCGTGGAGGTGCCTCAGGGATCCCGAAAAC
GAGCGAGAGATGAGACGAATGAGGGATAG
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protein sequence of NO25G01250.1

>NO25G01250.1-protein ID=NO25G01250.1-protein|Name=NO25G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=998bp
MELALASGQDWAADFWPLTTGASTDTFSNIMGASTTSSPGMLQQEQHPLG
QATFEQQQQHQHHQHQQPPPAMRTVGTGLTLGRLDLLGQKVVAASSSTST
ASTTNTYTPQPSPSPGRSTDTKRRGSDTARKDRSNVLKAYLMDVGCTKIR
GARKRRKNDEGEFEGGKVDWDSEWVQEQLVIPLEEFNAIRLDYERRSKEK
KLADATIERDWVTKDGSRIPKAKMLKNYYPTNLILHRFFDLMYGRLLRAQ
PISASVEEQMQSINPFLKTRPLAVFLLPMRGADDKEGGGNLKMFREGISR
SDPMVMNYSWEKDVIEIDGRYGWEEQRAVLARPNLRAVTYLDELLVKGVA
EKLRVGVELTTLWLSAFEKWGARGEDEGMGEIGEVREVDLAVFLSCFSEE
LRGTLRYLLCGPYEYKQTVTIEEFQAFFVWAAGLTGKAASIKVQLAALVA
CLKRTEGEGREIGRENICMYITTRKAKELKRPGDFYLRASNTQPGWIALE
YIPPFPSSPPTSGVGPTGAGFKIEGVSNSSCIQTSLFYFEVTTVNEKCRL
TFIDRHESHPNITSLILKHTGSDTWARLRQCAAIRAPVLPPPLPSPATTK
ELMLGMMGGMNHMMATPFGAVSELSPHRRQQYDHNGSNSSSNAGGYSHSS
GCKVVSATQGLKVDGAGMLMPSPVQRKKLKMQQPQQQQQQQPPQPQHHHR
SSSRRRESLDSLGLPPCLSNLDLHHSFGIGPSWCSIDYPAEQQPQQQQSQ
QQHHQQHQQHQQQSTVPHSKGLLVQQLQYQRQQQQQPQEAAQLSSLPALP
NRQQQEQQQDHHLLHPQQACQTVQLQQHPVHSPAHLRADGLRGEGAGKAA
LLVAVGEAAGAALTTTSDSLGLSTDHKAAVVAAAGGMGEGMEGGVEGLEG
GLFRYSRGAASLDRLQQQGGELEDPFPLQDFLVSSSSSFGSLGLSSSMPA
TPAGGEGGGLEGGAWAGNRFFSVDQLIKGVEVPQGSRKRARDETNEG*
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Synonyms
Publications