NO25G01210, NO25G01210 (gene) Nannochloropsis oceanica

Overview
NameNO25G01210
Unique NameNO25G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2581
Alignment locationchr25:336541..339121 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:336541..339121 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004310NSK004310Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01210.1NO25G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633036gene_8608Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01210.1NO25G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01210 ID=NO25G01210|Name=NO25G01210|organism=Nannochloropsis oceanica|type=gene|length=2581bp
AGTCACACGACACAGATCACGGCAATGAACACGTCCAATGCTCAGCAGCC
GCCTACAGATAACTCGGGGGCGACCAGCACCACGGCATTATCCACCACCA
CAAGCAACGAGGGTGGCAGCGGCGAACGTCCCATCCCCAACGAAACAAGG
CTCACGCCCGCCAAACGACCTTGCCCTTCAGCGCTGTCATCCCTCACAAC
CAAAGTTAAGCGGGTCCATGGGGATATGAGCGAAACAGGAGAACCCGCCG
TTGCCCTGGGTAGGCGCAGGGCTACCTCTCCCCCTGGTAACCCGCCACAG
GCACAACGGCGTCGGTTGATCCTGAGAGTCATAGACCAAAGCGAGGAGCG
ACCGACGACAGCTGCATCGATGGAGGTACTGTCCTCTATACTGCCTTTAT
CTGCTGCTCAGTTCCCAGCACGACAAATGCACGCGAGCACATCGGAGCTT
GGACTACAGCCCACCTCTTCTCCCCAGCTACTTCCGATGATCGCCCCGCA
TGTACATGGACGGACCTGTATTCCTACTGCTGCACCCTCAGCTTTGAACA
TTCCACCACATTTATCCACACTTCGTGATGTGCAAGGAGAGGAAGGCGAC
GATTCCGAGATTGCTCGCCATCTTGCCTCCTCCTCTCAACCAAGCGACTT
GTCTTCGTCTTCTTCCTCGTCCTCGTCCTCCTCCCTCACTACGTCCACCT
CCACCATCGGCACCACTACAATGCGAAGAACCAGCACACCCAAGCTGCTC
TCGATGTCTCCACTACCTTCCACCTACACCTGCCCCCTTTGCCTCTCCCT
GCTCGTCCGTCCTGTTACCCTCGAATGTGGCTCCTCCCTGTGCGAGTCCT
GCGCGGCACAAGCCCTCCACCATGCGTGGGCAATCGACGGGAAACGCACT
GCTCCCTGTCCTGTACTCGGTCGACGATGCATTCCTTTGACGAGGCTACC
GAGATTGAATGTGTTGTTGCACAACAATTTATTAGAGCTTTACCCGCAGC
AGTACCAGGCGAGGATGAGCGAAGTAAGTGCATCGCCTCACTCGGAGGTG
GTTGCAGCAGTACAGGGACGCACCGCGAAATTGGTAAGGTTGAGTCGAGA
ACGACAACAAGGTGGAGGAGGAAGGAGGCGGATACCGCCGGCGTTGCAGT
TGCGTGGAGGAGGCGGAGGAAGTGGAGGAGGAAGGGAGAGAGGGGGGGTA
GGCGCGAATGGCCAGCGACAGCAGCAATGGGATCGCCATTGGTTCTTCGG
GCTAGTGCAACAGGGGGAAGACGAGGATGAGGTTGAGATAGAAGACGAGG
AGGAGCTTCAAGGCCACCGGAATGTGCTCGATTTTCTAGCCCACCTTCGC
TTTTCCATCCCCTTCATTCTCGCCCTCCTCTCCCTCCTTCACGTCCCTGC
CCGGGGTGCTTATAGCAGTTTGGCGACGAATGGATTTGCCTTACTCCTCA
CTTCCTGTGTGGGTTCTCATTGGGCCCTTTGGTCACTCTTGAGTTCCATG
CTGACCGCTAACACCGTTACCAATACTGCCGCCGACGCTTGTGCTGCGGC
GTTAGAGACAGAATTAGTCGGTTTCCGTCACTTGCCTCAGGATTTGATGT
TACGTGTCAAATTAGCGGGAGATTTGGCACCGGGGCTTGGGTTTTGTTGT
ACCTGGATGCTATTAAGCAATGCTGTGGATCTCTTGACAACGTGGGGAAG
ATTGTTGATGATGAGAGCTGCGATACGTCAGCAGCAGCGACAGAGAGGCG
GAAGTAGAGAGGTAGAGAGTGATTTGAGGGAGTCTGTGTGGTGGCTCATA
GCCACAGAGCTATTAATCTTGATTGGAGCATGGCTGTGGTACGAGCTAGT
GAGTCTTGCCTCTTACCGAGCGTTCCATTTCATCCTCGAGCAGGGAGGGG
GAACAAGTGGGCTGAAGGTATTTGCCAATCCCCGTATGCATGATTTGTGC
TGTGTAACGTGGTACCTTGGCATCTTTACGCGTATTGTCCTTGGCCCATT
GCTCCCACCGCAGGATCTAGAGAAACAAGTAGCAACATTTAGAGGGTTAC
AGGGCTTGCCGACATGGAGGGCTATTGTTCTTGACCCGAGGATAACGTTG
TTGCATCTTCATTCAGGATTGGAAGTACGCTTGTTAAGTACTGGCTTGGC
TTGGGGGAGGGAAAAGATATTGGGGCAAGGAGGGCCGATGTGGTGGAGGG
GGGATGGAGAGGGGGAGGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
ACGCCAAGGGCGCCGAGGGAGGAGCGGGGCCCCCCATTTTTTGGTGGATG
GGAATGGGAAAGGGACGGAGAAAGATATAGCGCAGGAGGAAGTGGAGAGG
AAGAAGAGGAGGAGGGGAGCCATGCCCACTTGATTGCAGCGGGGCACACA
ACAACAGCTACAGTGGAGGCTCCTTAGAAGAGAGGGAGGAGGGAGGTATT
TGACTGTAGATTGTGAAAACGACTTAAATTAAGGTAGTTCAAAGAACACA
GACTGTGAGATAAAAGTTTGAACGGGTAGAAACAGAATCAACAAATGCAA
AGACATGGACGGGTATTTTCCCTCGTCTTAT
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protein sequence of NO25G01210.1

>NO25G01210.1-protein ID=NO25G01210.1-protein|Name=NO25G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=801bp
MNTSNAQQPPTDNSGATSTTALSTTTSNEGGSGERPIPNETRLTPAKRPC
PSALSSLTTKVKRVHGDMSETGEPAVALGRRRATSPPGNPPQAQRRRLIL
RVIDQSEERPTTAASMEVLSSILPLSAAQFPARQMHASTSELGLQPTSSP
QLLPMIAPHVHGRTCIPTAAPSALNIPPHLSTLRDVQGEEGDDSEIARHL
ASSSQPSDLSSSSSSSSSSSLTTSTSTIGTTTMRRTSTPKLLSMSPLPST
YTCPLCLSLLVRPVTLECGSSLCESCAAQALHHAWAIDGKRTAPCPVLGR
RCIPLTRLPRLNVLLHNNLLELYPQQYQARMSEVSASPHSEVVAAVQGRT
AKLVRLSRERQQGGGGRRRIPPALQLRGGGGGSGGGRERGGVGANGQRQQ
QWDRHWFFGLVQQGEDEDEVEIEDEEELQGHRNVLDFLAHLRFSIPFILA
LLSLLHVPARGAYSSLATNGFALLLTSCVGSHWALWSLLSSMLTANTVTN
TAADACAAALETELVGFRHLPQDLMLRVKLAGDLAPGLGFCCTWMLLSNA
VDLLTTWGRLLMMRAAIRQQQRQRGGSREVESDLRESVWWLIATELLILI
GAWLWYELVSLASYRAFHFILEQGGGTSGLKVFANPRMHDLCCVTWYLGI
FTRIVLGPLLPPQDLEKQVATFRGLQGLPTWRAIVLDPRITLLHLHSGLE
VRLLSTGLAWGREKILGQGGPMWWRGDGEGEDEEEEEEEEEETPRAPREE
RGPPFFGGWEWERDGERYSAGGSGEEEEEEGSHAHLIAAGHTTTATVEAP
*
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Synonyms
Publications