NO25G01050, NO25G01050 (gene) Nannochloropsis oceanica

Overview
NameNO25G01050
Unique NameNO25G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2177
Alignment locationchr25:291610..293786 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:291610..293786 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01050.1NO25G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|209786gene_8590Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g32gene8806Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01050.1NO25G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01050 ID=NO25G01050|Name=NO25G01050|organism=Nannochloropsis oceanica|type=gene|length=2177bp
GTCAATTCGGCAATTCAAGCATTCAAGTTTCGATCGAGCCGTTGGATGAG
AGAGGACCTACTCTGCATGTCGCACACTTTCCCATCTCCTTGACTTTTTT
TTCCTTCCGAGACAAGCTCCACCATTTTCACACAAATGTTCAGCTATGCA
CTTGTTTCTCGTCCCCCGTCTTTCCGTTCATTCTTCCTCAAATTATAATC
TCCACACAACTCTCTCTCCCTCCCAACCCCGAACAGGATTGTCGCCCGGT
CGTCGTCTCAGCCATGGCATTCTACAACCACCGCCTCCGCCCTCGTCGCG
CAATGGCCCTCCGCAGTCTGATTTTTGTTTTACTCGTCACTCTGCTCTGC
ACATTCGCCAATGGCAGCAGCAGTGGAGCGATGGTAGAACAGGAGACCGA
GGTCATGCGCGAGCTCGCCGACAAGGCCCCCCGCCCCACCCGTGTGCCCT
TTACGCGCCGCCCGACTGTCGCGCGAGTACCCCGGACCAAGGCTCCCACC
TTCAATGATCCTACCCCCCAGCCTCCCGATCTTGGTCCTGGTGGGGTGGT
TGTGGGAGGAGGGGGAGCAGAGGAGGAAGGACAGCATTACGTCCCCACTC
CGCCCCCCACAACTAGGGTGCCTCCTCCCGAGTCAGGAAAGGAAGCTTCT
GGTGGAGCAGTTACGGCCTTAATACCCTCGCTTAAGGATAATAAACCTTT
AATTTATGGCGGCGTAGGTGCTGCACTGCTGATTGTTGTGTTAGTCAGCA
TTTTCCTTGTTGTTCGCGCCTTACGTCGTCCCTTTACTTCAACCGCTGCT
CTCGCTGCCGCTACTGCCACTCATTCCTCCTATAATTGCACTAGCAATAC
TCGTGATGGATTTAACATAGAGGATTTGGCATCTCCGGACGTCTATACCC
TTTCGCCTAGCTCCTCCACCCTGCCCCGCTCCCACTCCATCAATTCCTCC
TCCTCCGTCCATTCTTCCTCCTCCTATGGAGGAAGTAATGCTGGCTCCCC
TATAAATGGCATGAGCACCGGTCTACGTGCCTCTGGTGAAGGTCTCAACT
ACGCCTCCGTCACCTTTAAGCAGCAGCTATCCATGCCCAAGCAACCGCAG
CAGAATCAGCAGCAGCAGCAGCAGCAGCAGCAACACCAGCAGCAACACCA
GCAGCAGCAGCGAAGAGGACATGCTTCTGCCTCTCCGCAGTTGCATTCCC
GTTCTCCTCCTTTTAACCTCCCTGCTTCTAGTTCTCCTTCTTCCCCTCCC
GTCGTAAAAGCTGTCGAAAAACAAGGAAAATCTCCCCCACCTCCCCCTCC
CCCTCCATCCCTCCCTCCCCTTCCCTCCCCCACCATGAACTCGGCTCCTA
AGGCCACCACTTTGCCTCCTGCTCCTCTCCACTCACCCCCCCTGTCGTCC
GGCAACAACGACAACAAAGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCGGGCGCCAAGCCCGGTGGCGAAGGGAAAGAG
GCAGTTTACCGAAAGTGTGATGATTCAGGAAGGGGAAGGTGATGATGGGA
AGAGTGGCTTTTAAGAAGCCAAATGAGCAGTGATTGTAGTGACAGCACCA
GATGGGGAAGAAGAATGAGTGGAGGGGGGGGGAGAGAGCATAAAGAAAAG
GAGAGCAAAAGAAGAAGGGAGGAAGAGAGGGTGGAGGAAAGGACGGAGAA
TGAGGAGCAGTCTGAATGTGCATATGATGCCCGTTCTCGGAGAGTGGCTG
CTTGAGGACCAAAGAGTGAGGAAAGGAGGAAATTGAAAATGACAGGAGGA
AGGAGTAAAGGGAGAGAACGCGGGAGGAAAGGAGACGAGAGGTGAGTGAT
TTGTATATAATAAGGATGGAACGAGTTGCGAATAAGAAAGGGAAAAGGGC
GCAGGCACCTGTACACGTTGAAGTAGCATGCATTCACAGACAGGAGGCGA
AATTCAGTAAACAAGGAAGTCAAAAAGGCCGTCCTCTCAAAATTCTCACA
CGCTTGCTCTCCCCCTCCATGCTCCCGCACTCGCCATTTGTGTTGCTCAT
TTCATCCCTCGTTAAAGTTTTCGCTCGTTAGGATCCGAAAGCAGGGAAAG
GGGGAAGGGACAGGAAGGGGGTGGGAAAGAAGCGCAGGACAAAAGATCCT
TCATAAATTGAGAACATTATAATGCAT
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protein sequence of NO25G01050.1

>NO25G01050.1-protein ID=NO25G01050.1-protein|Name=NO25G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MAFYNHRLRPRRAMALRSLIFVLLVTLLCTFANGSSSGAMVEQETEVMRE
LADKAPRPTRVPFTRRPTVARVPRTKAPTFNDPTPQPPDLGPGGVVVGGG
GAEEEGQHYVPTPPPTTRVPPPESGKEASGGAVTALIPSLKDNKPLIYGG
VGAALLIVVLVSIFLVVRALRRPFTSTAALAAATATHSSYNCTSNTRDGF
NIEDLASPDVYTLSPSSSTLPRSHSINSSSSVHSSSSYGGSNAGSPINGM
STGLRASGEGLNYASVTFKQQLSMPKQPQQNQQQQQQQQQHQQQHQQQQR
RGHASASPQLHSRSPPFNLPASSSPSSPPVVKAVEKQGKSPPPPPPPPSL
PPLPSPTMNSAPKATTLPPAPLHSPPLSSGNNDNKVSSSSSSSSSSSSSS
SSGRQARWRRERGSLPKV*
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Synonyms
Publications