NO25G00950, NO25G00950 (gene) Nannochloropsis oceanica

Overview
NameNO25G00950
Unique NameNO25G00950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2382
Alignment locationchr25:268142..270523 +

Link to JBrowse

Properties
Property NameValue
DescriptionDna polymerase mu
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:268142..270523 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0034061DNA polymerase activity
GO:0003677DNA binding
GO:0034061DNA polymerase activity
GO:0003887DNA-directed DNA polymerase activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR027421DNA_pol_X_lyase_dom
IPR001357BRCT_dom
IPR028207DNA_pol_B_palm_palm
IPR029398PolB_thumb
IPR002054DNA-dir_DNA_pol_X
IPR022312DNA_pol_X
Vocabulary: Biological Process
TermDefinition
GO:0071897DNA biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO25G00950 vs. NCBI_GenBank
Match: EWM21633.1 (dna polymerase mu [Nannochloropsis gaditana])

HSP 1 Score: 640.6 bits (1651), Expect = 5.300e-180
Identity = 341/645 (52.87%), Postives = 425/645 (65.89%), Query Frame = 0
Query:    8 AEPRAKALHPSSFFAGTKLLIVEDNGTLQQDISTMRAGMLVKKVKENAGLADVLKVSEVTGGRTLTAQRREHKLFRVTHLVLSRNLHRKVTDIIRGLRLPISCSLSPKQEEGKESEVFAAAAAAAL--PFQVVTPEWVSACLLKRQQVDTKPYHLFI-TSEGTKGEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPS------DSIEARLAPFPDLDLAAREALIAYGGPVLLTPPYRSSFPKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILVLNEGNVTAGFAPGPAHEKIASHDSMLMLIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYASERGFHLSQQAVYKDMKRQRNPKSEDGVFHTEKEVWDYLGLQFLPPCLRWA 644
            A PR  A   SS FA T++LI+ED G    DIS MRAG+L+KK++++ G A+V+  +EV  GR    ++R+ KL R TH+VLS++L  KV  ++  LR         K ++  E+    A     +    QVV+P+WVS CLL RQ VD +PY L +  +E  +G                                  P+       +IEARLAPF DLD   R+A  AYGGP++L+ P+ +SFPK+ACQRPAP  HPNRHL+   E L EMY   VGD ER TAFGR LAVLR+WPWK+  SKEL G+R++G SMR +I+EIL TGRCSRLE+ + D ++  LLDL RVHQVG  TARKW  AGY SV QIQAD++  E  G  E                        V++ L S F  SQRP+  Q++ +L+V+EY VKMTR  VA +EG+VR+AAL+AL  RGL  ETLLL TCGGY RGK LNGD DVLVSCT+  GQ GLREEIKR+M E+MG D+L+L EGN   GFA  P HEKIASHD+ML LIK++G YRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA E+G HLSQQAV+++ KR  NPKS DGVFH+E++VW++LGL++LPP LR A
Sbjct:    6 ASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRAREQRDSKLSRATHVVLSKSLEGKVPALVERLR-------REKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGE------------------VERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA 625          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: EWM21634.1 (dna polymerase mu [Nannochloropsis gaditana])

HSP 1 Score: 639.4 bits (1648), Expect = 1.200e-179
Identity = 343/645 (53.18%), Postives = 426/645 (66.05%), Query Frame = 0
Query:    8 AEPRAKALHPSSFFAGTKLLIVEDNGTLQQDISTMRAGMLVKKVKENAGLADVLKVSEVTGGRTLTAQRREHKLFRVTHLVLSRNLHRKVTDIIRGLRLPISCSLSPKQEEGKESEVFAAAAAAAL--PFQVVTPEWVSACLLKRQQVDTKPYHLFI-TSEGTKGEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPS------DSIEARLAPFPDLDLAAREALIAYGGPVLLTPPYRSSFPKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILVLNEGNVTAGFAPGPAHEKIASHDSMLMLIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYASERGFHLSQQAVYKDMKRQRNPKSEDGVFHTEKEVWDYLGLQFLPPCLRWA 644
            A PR  A   SS FA T++LI+ED G    DIS MRAG+L+KK++++ G A+V+  +EV  GR L A+ R+ KL R TH+VLS++L  KV  ++  LR         K ++  E+    A     +    QVV+P+WVS CLL RQ VD +PY L +  +E  +G                                  P+       +IEARLAPF DLD   R+A  AYGGP++L+ P+ +SFPK+ACQRPAP  HPNRHL+   E L EMY   VGD ER TAFGR LAVLR+WPWK+  SKEL G+R++G SMR +I+EIL TGRCSRLE+ + D ++  LLDL RVHQVG  TARKW  AGY SV QIQAD++  E  G  E                        V++ L S F  SQRP+  Q++ +L+V+EY VKMTR  VA +EG+VR+AAL+AL  RGL  ETLLL TCGGY RGK LNGD DVLVSCT+  GQ GLREEIKR+M E+MG D+L+L EGN   GFA  P HEKIASHD+ML LIK++G YRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA E+G HLSQQAV+++ KR  NPKS DGVFH+E++VW++LGL++LPP LR A
Sbjct:    6 ASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGR-LRARERDSKLSRATHVVLSKSLEGKVPALVERLR-------REKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGE------------------VERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA 624          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: CBN80507.1 (DNA polymerase mu [Ectocarpus siliculosus])

HSP 1 Score: 181.8 bits (460), Expect = 6.700e-42
Identity = 137/443 (30.93%), Postives = 203/443 (45.82%), Query Frame = 0
Query:  244 PKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQ--VISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPE-TLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQ-------EGLR--------------------EEIKRVMVE-------EMGRDILVLNEGNV------TAGFAPGPAHEKIASHDSMLMLIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYASER-GFHLSQQAVYKDMKRQRNPKSEDGVFHTEKEVWDYLGLQFLPPCLRW 643
            P YACQRP P  H N  ++  ++A+ +MY   VGD +RA +F R  +VLR     I S  E+  V ++GE M   +DEIL TG   RLE+ ++ P N     L +VH VG  TA+ W N G  SV+  +  +   +     +                                    +RP      V+ L +  +  V + R+ V G+   VR+ A R    R   PE TLL   CGG+RRGKE   DVDVLVS  R +G+       E LR                    E+++   VE       E G+    L +G +        G AP P   K+   + ++ L +  G   R+D++     QW F +LGWSG+   EKD+R Y  E+  + LSQ+ V   ++    P ++   F TE++++ +LGL+++PP LRW
Sbjct:  187 PMYACQRPTPMKHHNHEITDVLDAMTKMYK-VVGDGQRADSFMRLSSVLRFLDRTIRSGSEIRHVHHVGERMVEAVDEILATGTLGRLEELKSHPRNQVCQQLMKVHGVGSRTAKDWYNRGIRSVEDARRTLLPNDDDTEGD-----------------------------------EKRPNLKPEVVMGLKHFHDMQVPIGRDEVVGIADEVREEAER--FGRERDPEGTLLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVEALRALDGYLVEGEQIVGAEVKAFEDLEYFFVEGLKERLMERGKLCATLYQGQMGGFTKAKGGQAPQP---KLEREEVLMALWQLPGRKCRIDIVQVASSQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGV--TIRATDEPVTDIVSFQTEEDIFRFLGLEYIPPHLRW 586          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: XP_006166068.1 (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X2 [Tupaia chinensis])

HSP 1 Score: 148.7 bits (374), Expect = 6.300e-32
Identity = 116/412 (28.16%), Postives = 194/412 (47.09%), Query Frame = 0
Query:  236 TPPYRSSFPKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILVLNE----GNVTAGFAPGPAHEKIASHDSMLMLIKYKGLYR--RLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-SERGFHLSQQAVYKDMKRQRNPKSEDGVFH--TEKEVWDYLGLQFLPP 639
            +PP  S  P YACQRP P +H N HLS  +E L E   F  G   R  +F RA +VLR+ P  +T+  +L G+ Y+G     ++ E+L+ G C  +E+ Q+      +   T+V  VG+ TA +W   G  ++     D+R+                                          +SQR TR Q   L Y ++    + R     ++ VV  A     VR+ L   T+ LT  GG+RRGK    DVD+L+S      + GL   + ++++    + +L+  +    G  +     G   +       +  L +  G ++  R+D++  P  Q+ F +LGW+GS+  E++LR ++  ERG  L+ Q ++ D +++R       VFH  +E++++ +LGL++LPP
Sbjct:  128 SPPGPSQMPVYACQRPTPLLHHNTHLSEALETLAEAAGFE-GSEGRLLSFRRAASVLRALPGPVTALSQLQGLPYLGGHSFRVVQELLEHGVCEEVERIQSSDRYQTMKLFTQVFGVGVKTANRWYQEGLRTLD----DLRK------------------------------------------QSQRLTRQQRAGLQYHQDLSTPVQRPDAEALQQVVEVA-----VRQTLPGATVTLT--GGFRRGKLQGHDVDLLISHPEEGQEVGL---LPQLLLRLQDQGLLMYQQYQRGGEPSHIVRQGHTMDAFERSFCIFRLPQPPGAWKAVRVDLVVVPISQFPFALLGWTGSQLFERELRRFSHQERGLRLTSQGLF-DPEQKR-------VFHATSEEDIFRHLGLKYLPP 474          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: XP_014438679.1 (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X1 [Tupaia chinensis])

HSP 1 Score: 142.5 bits (358), Expect = 4.500e-30
Identity = 116/417 (27.82%), Postives = 194/417 (46.52%), Query Frame = 0
Query:  236 TPPYRSSFPKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILVLNE----GNVTAGFAPGPAHEKIASHDSMLMLIKYKGLYR--RLDVISPPPDQWAFCVLGWSGS-----KQMEKDLRDYA-SERGFHLSQQAVYKDMKRQRNPKSEDGVFH--TEKEVWDYLGLQFLPP 639
            +PP  S  P YACQRP P +H N HLS  +E L E   F  G   R  +F RA +VLR+ P  +T+  +L G+ Y+G     ++ E+L+ G C  +E+ Q+      +   T+V  VG+ TA +W   G  ++     D+R+                                          +SQR TR Q   L Y ++    + R     ++ VV  A     VR+ L   T+ LT  GG+RRGK    DVD+L+S      + GL   + ++++    + +L+  +    G  +     G   +       +  L +  G ++  R+D++  P  Q+ F +LGW+GS     +  E++LR ++  ERG  L+ Q ++ D +++R       VFH  +E++++ +LGL++LPP
Sbjct:  128 SPPGPSQMPVYACQRPTPLLHHNTHLSEALETLAEAAGFE-GSEGRLLSFRRAASVLRALPGPVTALSQLQGLPYLGGHSFRVVQELLEHGVCEEVERIQSSDRYQTMKLFTQVFGVGVKTANRWYQEGLRTLD----DLRK------------------------------------------QSQRLTRQQRAGLQYHQDLSTPVQRPDAEALQQVVEVA-----VRQTLPGATVTLT--GGFRRGKLQGHDVDLLISHPEEGQEVGL---LPQLLLRLQDQGLLMYQQYQRGGEPSHIVRQGHTMDAFERSFCIFRLPQPPGAWKAVRVDLVVVPISQFPFALLGWTGSQVPFPQLFERELRRFSHQERGLRLTSQGLF-DPEQKR-------VFHATSEEDIFRHLGLKYLPP 479          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: GAU92410.1 (hypothetical protein RvY_04493 [Ramazzottius varieornatus])

HSP 1 Score: 139.4 bits (350), Expect = 3.800e-29
Identity = 107/391 (27.37%), Postives = 177/391 (45.27%), Query Frame = 0
Query:  256 HPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMV---EEMG--RDILVLNEGNVTAGFAPGPAHEKIASHDSMLMLIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYASERGFHLSQQAVYKDMKRQRNPKSEDGV---FHTEKEVWDYLGLQFLPP 639
            +PN H+   +E + + Y   +GD  R  A+ RA++ +R +P  I   +++  ++ +G  +   I EI++TG   + +  +++    A+     +H VG  TA+KWV  GY ++  ++                                      +KV  +P          Q + L Y +E+  KMTR  V  +  +V        +R G      +   CG Y RG+E+ GDVD+L+  T  DG       I + +V    EMG   D L L EG           H+K   +  +  L K    +RRLD+I PP ++WA CVLGWSGS    + +RDYA ++G  L+  ++  ++ R    K  +G+     TE+ +++ LGL +L P
Sbjct:  259 NPNAHIIEQLEEMMKTYR-NMGDEFRGYAYARAISAIRKFPDPILGMEQIKQLKNVGPRIASHIVEIVETGHMEKKDGAESNEATKAMNLFVNMHGVGTKTAQKWVQMGYRTLDDLK--------------------------------------EKVKLTP---------EQAVGLKYYDEFQEKMTRREVEEIVRIVEDTV--DSIRSG-----FIFKVCGSYLRGREMCGDVDLLM--THSDGHS--HNTILKPLVGKLHEMGFLTDDLWLTEGR----------HKK---YFGVCKLFKEGSKHRRLDIIIPPYNEWATCVLGWSGSMYFVRSIRDYAHKKGMSLTDYSLNINVVRVNGEKVNEGIPLETPTEESIFEALGLPYLRP 577          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: XP_018414400.1 (PREDICTED: DNA nucleotidylexotransferase [Nanorana parkeri])

HSP 1 Score: 138.3 bits (347), Expect = 8.500e-29
Identity = 111/417 (26.62%), Postives = 183/417 (43.88%), Query Frame = 0
Query:  246 YACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILV---LNEGNVTAGFAPGPAHEKIASHDSMLMLIKY-----KGLYR---------------RLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYAS-ERGFHLSQQAVYKDMKRQRNPKSEDGVFHTEKEVWDYLGLQFLPP 639
            YACQR  P    NR  +   + L E Y F      R  A+ RA AVL+S P+ I + K+L G+ ++GE M+ +I+EIL+ G+ SR++Q        +    T +  VGL TA KW   GY +++ I ++                                             K    T  Q   LLY E+    +T+     VE ++R      +          ++T  GG+RRGK++  DVD+L++C +   +  +  +    + +   RD+L+   L E        P    + +       ++++      K  Y                R+D++  P +Q+AF +LGW+GS+Q E+DLR YAS E+   L   A+Y D  +    K+E     TE++++ +LGL++L P
Sbjct:  149 YACQRRTPLQDINRIFTDAFDILAENYEFLENKGPR-VAYQRASAVLKSLPFPILTMKDLEGLPHLGEEMKYIIEEILEDGKSSRVDQVIYSERYKSFKIFTSIFGVGLKTAEKWYRMGYRTLEDITSN---------------------------------------------KGLTFTSMQKHGLLYYEDITSSVTKTEADAVEHLIRTVICGFV-------SDAIVTVTGGFRRGKDVGHDVDILITCPQKRDENQILHKTINALKK---RDLLLFCYLVESTFDDTKRPSRYIDSLDHFQKCFLILQLQKEESKNAYSHKPKGCDAKRSWKAIRVDLVVTPYEQYAFALLGWTGSQQFERDLRRYASHEKKMMLDNHAMY-DKSKNIFLKAE-----TEEDIFTHLGLEYLEP 503          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: OQV26010.1 (DNA polymerase lambda [Hypsibius dujardini])

HSP 1 Score: 136.7 bits (343), Expect = 2.500e-28
Identity = 102/385 (26.49%), Postives = 175/385 (45.45%), Query Frame = 0
Query:  257 PNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILVLNEGNVTAGFAPGPAHEKIASHDSMLMLIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYASERGFHLSQQAVYKDMKRQRNPKSEDG---VFHTEKEVWDYLGLQFLPP 639
            PN+H+   +E +   Y   +GD  R  A+ RA++ +R +P  I  S+++  ++ +G  +   I EI++TG   +  +        A+     +H VG  TARKWV  G  +++ +++                                      K+  +P          Q + L Y EE+  KM+R+ V  + G V++A     ++ G      +   CG YRRG+E  GDVD+L+  T  DG+  + E I   ++ ++ +   + ++  +  G      H+K   +  +  L      +RRLD+I PP  +WA CVLGWSGS    + +RDYA ++G  LS  ++ K + R +      G      TE+ ++  LGL +L P
Sbjct:  284 PNQHIIDQLEEMMTNYR-NMGDEFRTYAYVRAISAIRKYPNPILDSEQIKDIKNVGPRIAKHIMEIIETGHYEQNTEAAKSEDTAAMKLFVNIHGVGTKTARKWVQMGLRTLEDVKS--------------------------------------KIALTP---------EQTVGLKYYEEFQQKMSRKEVEEIAGTVQRAV--NSIKAG-----FVFEICGSYRRGREHCGDVDLLM--THPDGRV-IHESILEPLLTQLHKSRFLTDDLFLVDG-----PHKK---YFGVCRLPHEGAKHRRLDIIIPPYSEWATCVLGWSGSMYFVRSMRDYAHKKGMSLSNHSLRKSVVRVKGETVHAGERLETPTEESIFQALGLPYLRP 602          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: XP_023819242.1 (DNA nucleotidylexotransferase [Oryzias latipes])

HSP 1 Score: 134.4 bits (337), Expect = 1.200e-27
Identity = 110/428 (25.70%), Postives = 182/428 (42.52%), Query Frame = 0
Query:  232 PVLLTPPYRSSFPKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKRVMVEEMGRDILVLNEGNVTAGFAPGPAHEKIASHDSMLMLIKYK------GLYR-----------RLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYAS-ERGFHLSQQAVYKDMKRQRNPKSEDGVFHTEKEVWDYLGLQFLPPCLR 642
            P + TPP   +  +YACQR     + N+ L+   E L E Y F   + +   AF RA +VL+S  W++ SS ++  +  +GE+M  +++EIL  GR   + +  +D     L   T V  VGL TA KW   G  +   + A+                                              S R  R Q    L+  +    +++     +  ++ + A+ A+   G      +LT  GG+RRGKE   DVD +V+      +EGL   I + +  +           +      P    E +       +++K +      GL R           R+D++SPP D++AF +LGW+GS+Q E+DLR +A  ER   L   A++         K+E     +EK+++ +LGL+++ P  R
Sbjct:   72 PEVSTPPSVVAVSQYACQRRTTTENHNKTLTDAFEVLAENYEFNEMEGQ-CLAFRRAASVLKSLSWQVRSSHQVHDLPCLGETMEELVEEILQYGRSFEVAKILSDERFQTLKGFTSVFGVGLKTAEKWYRRGLRTFPDVMAE---------------------------------------------PSIRLNRMQQSGFLHYGDISRHVSKAEALALGNIIDE-AVHAIAPNG------ILTLTGGFRRGKEFGHDVDFIVTTPERGQEEGLLTNIIKHLKHQGILLFCDFQPSSFDLSKLPSHRFEAMDHFAKCFLILKLEGHQVEGGLCRAEGDSRDWRAVRVDLVSPPLDRFAFTLLGWTGSRQFERDLRRFARLERRMLLDNHALFD------KTKNEFLAATSEKDIFAHLGLEYIEPWQR 440          
BLAST of NO25G00950 vs. NCBI_GenBank
Match: XP_021033437.1 (DNA-directed DNA/RNA polymerase mu [Mus caroli])

HSP 1 Score: 133.7 bits (335), Expect = 2.100e-27
Identity = 112/424 (26.42%), Postives = 186/424 (43.87%), Query Frame = 0
Query:  237 PPYRSSFPKYACQRPAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKITSSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVHQVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREXXXXXXXXXXXXXXXXXXXXXXVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGVEGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVDGQEGLREEIKR-------VMVEEMGRDILVLNEGNVTAGFAPGPAHEK------------IASHDSMLMLIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-SERGFHLSQQAVYKDMKRQRNPKSEDGVFH--TEKEVWDYLGLQFLPP 639
            PP  +S P YACQRP+P  H N  LS  +E L E   F   +  R  +F RA +VL+S P  +TS  +L G+ Y GE    +I E+L+ G C  ++Q +       +   T+V  VG+ TA +W   G  ++ +++                                               + QR T+ Q   L Y ++    + R      +    Q  + A VR+ L   T+ LT  GG+RRGK    DVD L++      + GL  ++         V+  +  R  L  +  N+    +   A E+             A   ++     +K +  R+D++  P  Q+ F +LGW+GS+  E++LR ++  E+G  L+   ++ D +++R       VFH  +E++V+  LGL++LPP
Sbjct:  131 PPVSASMPAYACQRPSPLTHHNTVLSEALETLAEAAGFEANEG-RLLSFSRAASVLKSLPCPVTSLSQLHGLPYFGEHSSRVIQELLEHGTCEEVKQVRCSERYQTMKLFTQVFGVGVKTANRWYQEGLRTLDELRE----------------------------------------------QPQRLTQQQKAGLQYYQDLSTPVRR-----ADAEALQQLVEAAVRQTLPGATVTLT--GGFRRGKLQGHDVDFLITHPEEGQEVGLLPKVMSCLQSQGLVLYHQYHRSHLADSAHNLQQRSSTMDAFERSFCILGLPQPQQAALAGALPPCPTWKAV--RVDLVVTPNSQFPFALLGWTGSQFFERELRRFSRQEKGLWLNSHGLF-DPEQKR-------VFHATSEEDVFRLLGLKYLPP 490          
The following BLAST results are available for this feature:
BLAST of NO25G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21633.15.300e-18052.87dna polymerase mu [Nannochloropsis gaditana][more]
EWM21634.11.200e-17953.18dna polymerase mu [Nannochloropsis gaditana][more]
CBN80507.16.700e-4230.93DNA polymerase mu [Ectocarpus siliculosus][more]
XP_006166068.16.300e-3228.16PREDICTED: DNA-directed DNA/RNA polymerase mu isof... [more]
XP_014438679.14.500e-3027.82PREDICTED: DNA-directed DNA/RNA polymerase mu isof... [more]
GAU92410.13.800e-2927.37hypothetical protein RvY_04493 [Ramazzottius varie... [more]
XP_018414400.18.500e-2926.62PREDICTED: DNA nucleotidylexotransferase [Nanorana... [more]
OQV26010.12.500e-2826.49DNA polymerase lambda [Hypsibius dujardini][more]
XP_023819242.11.200e-2725.70DNA nucleotidylexotransferase [Oryzias latipes][more]
XP_021033437.12.100e-2726.42DNA-directed DNA/RNA polymerase mu [Mus caroli][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004332NSK004332Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00950.1NO25G00950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546456gene_8584Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g39gene8813Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00950.1NO25G00950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00950 ID=NO25G00950|Name=NO25G00950|organism=Nannochloropsis oceanica|type=gene|length=2382bp
ATGCTCAGCCTTGCCGCCGGCGCAGAGCCCCGGGCCAAAGCCCTCCACCC
CTCCTCCTTCTTTGCCGGAACCAAGTTGCTTATTGTGGAGGACAATGGAA
CATTGCAGCAGGACATTTCGACCATGCGCGCAGGAATGCTGGTAAAAAAG
GTCAAGGAAAACGCAGGGCTGGCCGACGTGCTCAAGGTCTCTGAGGTGAC
AGGCGGCCGCACACTCACGGCTCAGgtactttctgagaaaattgcacttt
tcaataatcatcttaaactgtcgcacttctctccttctatattctagttt
tcatctgccaaccctcaccatcccctcccctcccatcctctccctcacac
tccgaaacagCGGCGCGAGCATAAGCTTTTCCGCGTCACCCACCTTGTTC
TCTCCCGAAACCTTCATCGCAAAGTTACAGATATCATTCGCGGCCTCCGC
TTGCCCATTTCCTGTTCTCTCTCCCCGAAGCAGGAGGAAGGGAAGGAGAG
TGAGGTATTTGCAGCAGCAGCAGCAGCAGCATTGCCATTTCAAGTTGTCA
CTCCTGAGTGGGTCTCGGCGTGTTTGCTCAAGAGGCAGCAAGTCGACACA
AAGCCTTACCACTTGTTTATCACTAGCGAAGGAACAAAGGGCGAGAAGAA
GCGAGAGGGAGGGAAGGAGGGCGCTCCCGAGGCGGCCTCCTCCTCATCCT
CCTCCGCTGGCAGCAACAAAAAAGCACGCACTGCGACCACCACACCCTCC
GATTCCATCGAAGCCCGCCTTGCTCCTTTTCCTGATTTAGACCTCGCGGC
AAGAGAGGCGCTCATTGCCTACGGCGGTCCCGTGCTTCTCACTCCCCCTT
ACCGATCCTCCTTTCCAAAATACGCGTGCCAACGGCCAGCGCCACGCATG
CATCCAAATCGTCATTTATCATCTTTTATGGAGGCTTTGGAAGAGATGTA
TTTGTTTGCAGTCGGAGACAATGAACGGGCAACGGCGTTTGGGCGGGCTC
TTGCGGTTTTAAGGTCGTGGCCATGGAAGATCACGAGCAGCAAGGAGCTG
ATGGGGGTCAGATACATTGGAGAAAGCATGCGGGGAATGATCGATGAAAT
TCTTGACACGGGCCGTTGTTCTCGCCTGGgtacgtcctcgccatctgttc
ttccctctttcatacagacgtccttgccgtctgttgcttcctctttcaac
acatgttgtagtctgttgcttcctccttcattctttcgacactcaatcat
tcagcctcgcgcctttccctccctcccttcctccttccctcccgagggcg
ttcaagcacatcccttcaaccaagtcctcctcagccttacttacctccat
caagtggcccagccactgtccattcatgacgatactgtgctcatagcctt
ccctccctcctcctcttcccctccgcgcaaaaccttacacccagAACAAT
TTCAAGCGGACCCCACCAACCTCGCCCTCCTCGATCTCACCCGCGTCCAT
CAGGTAGGACTTGTCACGGCCCGGAAATGGGTGAATGCCGGCTACACAAG
CGTCAAGCAAATTCAGGCAGATATGAGGGAAGGAGAGGGAGGGGGCGGGA
GGGAAGGAGGGTTGGAATCGGATGAAGGAGGGGAAGGAGGAGGAGAAACA
CGGGAGGAAGGAAAGGAGGAGGTTGTGGTACAGAAAGTGTTGCACTCTCC
ATTTTATAAGAGCCAGAGGCCGACGCGTGCACAGGTCATAAGTTTGCTGT
ATGTGGAGGAATATGGGGTGAAGATGACGAGGGAAATCGTGGCGGGTGTG
GAAGGCGTTGTGAGGCAAGCGGCTTTGAGGGCACTCGTGAGAAGGGGCTT
GCGTCCTGAAACACTTTTGCTGACCACCTGTGGAGGGTATCGACGGGGGA
AAGAATTGAATGGCGATGTAGATGTGCTGGTTTCGTGTACACGGGTGGAC
GGGCAGGAGGGGTTGAGGGAGGAGATCAAAAGAGTCATGGTGGAGGAGAT
GGGAAGAGACATTCTGGTGCTGAACGAGGGAAACGTTACGGCGGGATTCG
CCCCAGGCCCGGCGCATGAGAAGATCGCGAGTCATGATAGCATGCTAATG
CTTATAAAGTATAAGGGTCTGTATCGTCGTTTGGATGTCATTTCACCCCC
ACCTGATCAGTGGGCGTTTTGTGTACTAGGTTGGTCGGGCTCGAAGCAGA
TGGAAAAAGACTTGAGGGATTACGCAAGTGAGAGGGGATTTCACTTGTCG
CAGCAGGCCGTATATAAAGACATGAAGAGACAGAGGAATCCCAAGAGTGA
GGACGGGGTGTTTCATACCGAGAAGGAGGTGTGGGACTACTTGGGGTTGC
AATTCCTGCCGCCTTGCCTGCGCTGGGCTTGA
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protein sequence of NO25G00950.1

>NO25G00950.1-protein ID=NO25G00950.1-protein|Name=NO25G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=644bp
MLSLAAGAEPRAKALHPSSFFAGTKLLIVEDNGTLQQDISTMRAGMLVKK
VKENAGLADVLKVSEVTGGRTLTAQRREHKLFRVTHLVLSRNLHRKVTDI
IRGLRLPISCSLSPKQEEGKESEVFAAAAAAALPFQVVTPEWVSACLLKR
QQVDTKPYHLFITSEGTKGEKKREGGKEGAPEAASSSSSSAGSNKKARTA
TTTPSDSIEARLAPFPDLDLAAREALIAYGGPVLLTPPYRSSFPKYACQR
PAPRMHPNRHLSSFMEALEEMYLFAVGDNERATAFGRALAVLRSWPWKIT
SSKELMGVRYIGESMRGMIDEILDTGRCSRLEQFQADPTNLALLDLTRVH
QVGLVTARKWVNAGYTSVKQIQADMREGEGGGGREGGLESDEGGEGGGET
REEGKEEVVVQKVLHSPFYKSQRPTRAQVISLLYVEEYGVKMTREIVAGV
EGVVRQAALRALVRRGLRPETLLLTTCGGYRRGKELNGDVDVLVSCTRVD
GQEGLREEIKRVMVEEMGRDILVLNEGNVTAGFAPGPAHEKIASHDSMLM
LIKYKGLYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYASERGFHLS
QQAVYKDMKRQRNPKSEDGVFHTEKEVWDYLGLQFLPPCLRWA*
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Synonyms
Publications