NO25G00890, NO25G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO25G00890 vs. NCBI_GenBank
Match: EWM21594.1 (hypothetical protein Naga_100012g47 [Nannochloropsis gaditana]) HSP 1 Score: 520.0 bits (1338), Expect = 1.300e-143 Identity = 303/660 (45.91%), Postives = 366/660 (55.45%), Query Frame = 0 Query: 72 PHEQCTIVELHNRKGCLYQPKSILSLDVDNAIPTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGPPQAYPWRDGYKVTSSEALDLQPLLNSRLTGYGGADVATSFLSPPFKNDGGKHYSLWLLGDTFLGKMIEGANGEKKRVPGYFVHNSVALIPVWEAPGEEADPVEVVFWHGLSSTSSSSENGRKDRGVSPFPSPSLDEGGKEGGREEGGGCPESLFRVAMESARKDENECHEGGEYLWPISGLGVDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRWAYLPWIETDVNLTRSVFNFQVLGTTLIVVDNTHLPPPQWSYRLKDLPFTSSSDNWFQAMALAXXXXXXXXXXXXXXXXXXXXXFVARNVEEMVYLMGTTSRLEEGGTEEGKEGEGVPRQILGKVPVKGLLDLSLQGMEVWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSTILSPVYTGISLHFHPYLQRWYSISIDWINKIVLLQSSRLITGPWDSTPIYSLPSPFNSSTLMAYSGKAHPELATKDNEIVFTYVVNTPGVVYPLFEEGADVLYVPRFIRLVFE-KEKGKE 731 P ++CTIVELHNRKGCL++ K+ L D+D IPTPSS FGPPQ+ WR G ++T SEA++LQPLL++R GY GADVA S +PP D G+ ++LWLLGDTFLG+M EG ++R+PGYFVHNSVA +PVW P EADP +VVFWHGLS +PF + + EE GCP SLFR E R DENECHEGGEYLWP+SGL VDL+ ATRWAYLPWIE DVN+TRSV NFQVLGTTL+VVD+ HL PP+W YR +D P T NWFQA+ALA XXXXXXXXX +AR+ E+V+LMGT E+ E G+G RQILG+VPVKGLLD++L+GMEVWG V +++LSPVYTG+SL + +L+RWYS++IDW+ K LLQ++ ITGPWDSTPIY LP PFN S LMAY+GKAHPELA +NEIVFTYV NTPGVVYPLFE+GAD+LYVPRF+R+VF+ KE GKE Sbjct: 69 PQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSS-------SGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWR-GRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRM-EG----RRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPP-------------APFAATA---------EEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLA-------------------------AAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALA--------GEEEXXXXXXXXXXLARSENELVFLMGTAP--EDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWG-------------RGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKE 645
BLAST of NO25G00890 vs. NCBI_GenBank
Match: EWM25898.1 (hypothetical protein Naga_100048g28 [Nannochloropsis gaditana]) HSP 1 Score: 198.0 bits (502), Expect = 1.100e-46 Identity = 165/621 (26.57%), Postives = 237/621 (38.16%), Query Frame = 0 Query: 155 WRDGYKVTSSEALDLQPLLNSRLTGYGGADVATSFLSPPF-----------------------------KNDG-------GKHYSLWLLGDTFLGKMIEGANGEKKRVPGYFVHNSVALIPVWEAPGEEADPV---EVVFWHGLSSTSSSSENGRKDRGVSPFPSPSLDEGGKEGGREEGGGCPESLFRVAMESARKDENECHEGGEYLWPISGLGVDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRWAYLPWIETDVNL-TRSVFNFQVLGTTLIVVDNTHLPPPQWSYRLKDLPFTSSSDNWFQAMALAXXXXXXXXXXXXXXXXXXXXXFVARNVEEMVYLMGTTSRLEEGGTEEGKEGEGVPRQ-----ILGKVPVKGLLDLSLQGMEVWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSTILSPVYTGISLHFHPYLQRWYSISIDWINKIVLLQSSRLITGPWDSTPIYSLPSPFNS-STLMAYSGKAHPELATKDNEIVFTYVVNTPGVVYPLFEEGADVLYVPRFIRLVFEKEKGK 730 WR G ++ ++EA DLQPL + R G+ GADVATSF PP K +G GK+ +WL GDT LG AN +++ +F+HNSVA +PV A P+ +VVF +S GGCP S+F ++EC +YLWPISG+GV A RWAY+ V+L + FNF +LGTT++VVDN H P QW YR +DLP T ++ NW+ AM +A E+M+YL G + E G P Q L ++PV+ L+DLS + MEVW + ++ PV++ S+ + L +Y + +DW++ V+L + +T W+ +Y +P PFN + M Y+GKAHPEL+ +D E++ T++ N PG + PLFE GA +YVPRF+RL E+ K Sbjct: 546 WR-GIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKY--MWLFGDTLLGY----ANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSK----------------------------------GGCPVSIF----VRGPPQDDECVHTQDYLWPISGIGVS-----YLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAE-----------------LATGPEDMIYLFGVNN----------TEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWA-----------------------------------------------LTKGSPDEKAQATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSRED-ELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLERPAPK 1041
BLAST of NO25G00890 vs. NCBI_GenBank
Match: EWM29268.1 (glycolipid 2-alpha-mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 129.4 bits (324), Expect = 4.800e-26 Identity = 137/581 (23.58%), Postives = 209/581 (35.97%), Query Frame = 0 Query: 155 WRDGYKVTSSEALDLQPLLNSRLTGYGGADVATSFLSPPFKNDGGKHYSLWLLGDTFLGKMIEGANGEKKRVPGYFVHNSVALIPVWE---APGEEADPVEVVFWHGLSSTSSSSENGRKDRGVSPFPSPSLDEGGKEGGREEGGGCPESLFRVAMESARKDENECHEGGEYLWPISGLGVDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRWAYLPWIETDVNLTRSV-----FNFQVLGTTLIVVDNTHLPPPQWSYRLKDLPFTSSSDNWFQAMALAXXXXXXXXXXXXXXXXXXXXXFVARNVEEMVYLMGTTSRLEEGGTEEGKEGEGVPRQILGKVPVKGLLDLSLQGMEVWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSTILSPVYTGISLHFHPYLQRWYSISIDWINKIVLLQSSRLITGPWDSTPIYSLPSPFNSSTL-MAYSGKAHPELATK-----DNEIVFTYVVNTPGVVYPLFEEGADVLYVPRFIRL 722 WRD ++ A +L LL R GY G+DVATSF P G +WLLGDT+LG ++G K++ + N+VA P A GE P +V F+ G S + +PF + E G+ G LWP+SG+ V+ + ++ NLT + NF+V GT+LIV++N P +W Y + D+ T+ + NWF A+A+A +A + E+++YL+G G G + + +LG++ V LL MEV I+SP SL ++ L W S+++D ++ ++L S+R ++GPW S I+S+P+P++ +L Y+GK HPELA + D E VF+YV N P LF+EG LY P+FIR+ Sbjct: 905 WRD-RDISVEPAPELSGLLAPRRFGYLGSDVATSFRLPSVAGHGS---YMWLLGDTYLGT----SDGLKRQGMHTTISNAVAFFPSGADLGAAGELLTPSDVTFFWGYDLDGSPT---------APFEA--------EAGQ--------------------------AAGTVLWPVSGVSVEYQGVVKIV------------------------------------------LFAQRVQKTHNLTDFLGVADGMNFEVEGTSLIVIENPAAAPNRWRYSVTDIAGTNGTHNWFSAVAVAGGKE------------------IADSPEDVLYLVGNV-----GARGLGVYDDEASKNVLGRIKVTDLLKRRFDRMEVLVEEAHESRESDGKELWMSTAEAEASVARRR--------------------------------------------------------KGIISPANAETSLQYNSELGAWVSLAVDSVSAQLVLWSARSVSGPWTSAVIHSIPAPYDDLSLYRCYAGKGHPELAREGLPGGDVEFVFSYVCNAPSDSGILFDEGQLTLYAPQFIRV 1313 The following BLAST results are available for this feature:
BLAST of NO25G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00890 ID=NO25G00890|Name=NO25G00890|organism=Nannochloropsis oceanica|type=gene|length=3098bpback to top protein sequence of NO25G00890.1 >NO25G00890.1-protein ID=NO25G00890.1-protein|Name=NO25G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bpback to top Synonyms
Publications
|