NO25G00850, NO25G00850 (gene) Nannochloropsis oceanica

Overview
NameNO25G00850
Unique NameNO25G00850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1407
Alignment locationchr25:238235..239641 +

Link to JBrowse

Properties
Property NameValue
Descriptionalpha/beta-Hydrolases superfamily protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:238235..239641 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR007751DUF676_lipase-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO25G00850 vs. NCBI_GenBank
Match: EWM21568.1 (hydrolase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 393.7 bits (1010), Expect = 8.100e-106
Identity = 225/444 (50.68%), Postives = 281/444 (63.29%), Query Frame = 0
Query:   18 SLLICSFVITMPPSEGFAAAPSPPPTAAGHSATIGTPTHLAVVVHGLVGRPDDLSYLRESIEKQGHG-ILAHCAACNLDKTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPESKTILGLTPITFMSIATPHLGVRRFTVIPLPDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCITYGSSFEQRGHILKETLILPTVEKNDVKMEVWEIPRREWVEEEEGREGGVGVGRRRGSWAVVGEEERDRMGRLASIRLAAGGALGGE-NEEWMEEAMAARLNSLGWEKVAVTFRAPSFWSAHNIICALSRSRVGTYLFKKGRSVMDHAAGRIARAAAEED 460
            +L+  S  + MP +E FAA  S   + +    ++  PTHLAVVVHGL GRP DL+YL  +I  +G G IL H A CNL KT DGV  GGERLAAE++++VAA+PSL  ISFIGNSLGG+YSRYA+SLLW+P ++T+LGL PITFMSIATPHLGVRRFTV+PLPD++H   PL IGQTG+DL LR                              +FLEPLAAF++R AYGN+K+D+LVP GTALFHP                                         S E  GHILKET++LP   + DV+MEV+ +P   W +  +  EG V     +G+  V+ +E  D  GRLAS+   AGGA+  + N +WME  MAA+LN+LGWEKVAV FR P F+SAHN+ICALSR  + T+LF+KG+ VMDHAA RIAR AAEED
Sbjct:   16 ALVFFSCCLAMPSAESFAAPASHASSTSIPVNSVPEPTHLAVVVHGLHGRPADLTYLGNAIGSRGQGRILPHLAHCNLHKTMDGVVKGGERLAAEIKEVVAAHPSLRAISFIGNSLGGVYSRYALSLLWEPRTRTVLGLKPITFMSIATPHLGVRRFTVVPLPDLVHVATPLFIGQTGNDLILR-------------SRGEGETPLLLEMAQSTKFLEPLAAFRHRCAYGNVKEDLLVPIGTALFHPG--------------------------------------PESMEGTGHILKETVVLPDGAREDVRMEVFAMPPAPWEDGLKEVEGSV-----QGASPVM-KERADGRGRLASVPAVAGGAVPDDSNRDWMEPRMAAQLNALGWEKVAVAFRTP-FFSAHNMICALSRDPLTTFLFRKGQGVMDHAAARIARGAAEED 401          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: CBJ48764.1 (putative serine esterase [Ectocarpus siliculosus])

HSP 1 Score: 209.5 bits (532), Expect = 2.200e-50
Identity = 177/430 (41.16%), Postives = 223/430 (51.86%), Query Frame = 0
Query:   52 GTPTHLAVVVHGLVGRPDDLSYLRESIEKQGHG-ILAHCAACNLDKTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPES--------KTILGLTPITFMSIATPHLGVRRFTVIPLPDVLHFTPPLVIGQTGHDLFL------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCITYGSSFEQRGHILKETLILPTVEKNDVKMEVWEIPRREWVEEEEGREGGVGVGRRRGSWAVVGEEERDRMGRLASIRLAAGGALGGE---NEEWMEEAMAARLNSLGWEKVAVTFRAPSFWSAHNIICALSRSRVGTYLFKKGRSVMDHAAGRIARAAAE 458
            G P HL V+ HGL G P+DL+YL++S+E++G   IL H A  N  KT DGV  GG RLA E+ ++V + PSL  IS +GNSLGG+Y RYA  LL++ E+         T+ GL+P  FM+IATPHLGVRRFT +PLP  LH    + +G+TGHDLFL             XXXXXXXXXXXXXXXX           + K FL PL AF++RRAY N + D +VP+GTA F  E                    XXXXXXXXXX     ++ G S    G       +    E               + +   G +    VG  R S                       GA   E     + MEE MAA LNS GWEKV+V F   + +S HN ICALSR+ + T L+  GRSV+DHAA  + +   E
Sbjct:   61 GLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYVRYAAKLLYRDETTGGDGGTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRENSLLYNMATTKDFLRPLKAFRWRRAYANRRGDFMVPYGTAAF-VEPDEGDGSDASPSGRDGAKTGXXXXXXXXXXESDAVVSRGVSSPPDG---AAAALADGTES------------FTFADRLLGAKNAAIVGVSRVSXXXXXXXXXXXXXXXXXXXXDRAGAAKKEEALTRKSMEEEMAAGLNSCGWEKVSVDFGGVAPFS-HNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRE 473          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: XP_005831493.1 (hypothetical protein GUITHDRAFT_109633 [Guillardia theta CCMP2712] >EKX44513.1 hypothetical protein GUITHDRAFT_109633 [Guillardia theta CCMP2712])

HSP 1 Score: 183.3 bits (464), Expect = 1.700e-42
Identity = 103/226 (45.58%), Postives = 132/226 (58.41%), Query Frame = 0
Query:   48 SATIGTPTHLAVVVHGLVGRPDDLSYLRESIEKQG---HGILAHCAACNLDKTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLL------WQPESKTILGLTPITFMSIATPHLGVRRFTVIPLPDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPE 265
            S +   P HL V+VHGL G  DDL+YL+ S++ Q       L + A CN DKT DGV+AGG RLA E+ ++V   PSL  ISF+GNSLGG+YSRYAI++L       + E   + GL P TF++ ATPHLGVRRFT +P+PD LH   P+ +G+TG DLF+                            + + FL  L +F  RRAY NL+ D LVPFGTA F  E
Sbjct:  151 SVSSSGPEHLIVLVHGLAGTADDLAYLKRSVDSQDGTLKNTLVYLAKCNEDKTRDGVEAGGWRLAKEIVELVEEVPSLQRISFVGNSLGGLYSRYAIAVLHREGGGGRQEEDLVCGLKPDTFVTTATPHLGVRRFTYLPIPDQLHGLAPVFVGRTGDDLFM-------------LGKEGDEPPLLLLMSTCEVFLRGLRSFSRRRAYANLEGDFLVPFGTAAFMVE 363          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: XP_005759502.1 (hypothetical protein EMIHUDRAFT_350772 [Emiliania huxleyi CCMP1516] >XP_005761382.1 hypothetical protein EMIHUDRAFT_371869 [Emiliania huxleyi CCMP1516] >EOD07073.1 hypothetical protein EMIHUDRAFT_350772 [Emiliania huxleyi CCMP1516] >EOD08953.1 hypothetical protein EMIHUDRAFT_371869 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 149.8 bits (377), Expect = 2.000e-32
Identity = 87/217 (40.09%), Postives = 116/217 (53.46%), Query Frame = 0
Query:   50 TIGTPTHLAVVVHGLVGRPDDLSYLRES-IEKQGHGILAHCAACNLDKTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPESKTILGLTPITFMSIATPHLGVRRFTVIPLPDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPEG 266
            T  +P HL V+ HGL G   +L+ LR+  +   G  +L H A+ N   T DGV AGG RLAAE+R + A+ PSL ++S +GNSLGG+Y R A + L+    +  LGL P T ++   PHLGVRR+T +PLP  LH    LV G+T  DL LR                            + R+   L +F+ RR Y NL+ D +VPFGTA     G
Sbjct:    8 TAASPDHLVVLQHGLYGGASNLAVLRQCLVGIGGDNVLVHLASANEGMTRDGVAAGGRRLAAEIRSVAASAPSLESLSLVGNSLGGLYVRAAAAELYGGGQQE-LGLAPNTLVTTGCPHLGVRRYTYLPLPPALHSLGGLVAGRTASDLLLR-----------RTDADPRRPLLVEMADPDSRYGVALRSFQRRRLYANLRGDFMVPFGTAAIETGG 212          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: XP_002504771.1 (predicted protein [Micromonas commoda] >ACO66029.1 predicted protein [Micromonas commoda])

HSP 1 Score: 135.6 bits (340), Expect = 4.000e-28
Identity = 126/426 (29.58%), Postives = 180/426 (42.25%), Query Frame = 0
Query:   42 PTAAGHSATIGT--PTHLAVVVHGLVGRPDDLSYLRESI-EKQGHGILAHCAACN-LDKTFDGVQAGGERLAAEVRQIVAAN-PSLHTISFIGNSLGGIYSRYAISLLWQPESKTILGLTPITFMSIATPHLGVRRFTVIPL-PDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEK---------RFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCITYGSSFEQRGHILKETLILPTVEKNDVKMEVWEIPRREWVEEEEGREGGVGVGRRRGSWAVVGEEERDRMGRLASIR---LAAGGALGGENEEWMEEAMAARLNSLGWEKVAVTFRAPSFWS-AHNIICALSRSRVGTYLFKKGRSVMDHAA 449
            PT A  + + G   P+ L V++HGL G PDDL  L  ++ ++ G  +L H  ACN L ++FDGV  G  R+A E+R +VA +  SL  IS +GNSLGGIY+RYA +LL+  +SKTI GL P TF++ A+PHLGV  F  + + P  L      +IG++   L LR                                        F++ LA+F+ R AY N  +D LV F TA   P+ +                                     +  E+R            ++                        G  G      + A    +ERD +    + R   L   G+  G+    ++  MAA L +L W  V V F  P +   AHN ICAL R  V  +LFK G  +++H A
Sbjct:   93 PTLAATTGSQGADGPSQLFVLIHGLGGTPDDLRCLERNLTQRGGTDVLVHKPACNTLVRSFDGVPNGARRVADEIRAVVAEHRASLRRISLVGNSLGGIYARYAAALLFDEDSKTIAGLEPTTFLTTASPHLGVGPFGYLGMFPSPLQTVGAALIGESCSQLMLRDGWGNRRPLLAKMADPMNGKEGARGSGGGSGARDEADGLPFVDALASFERRCAYANAVNDFLVAFETASIDPDATR------------------------------------TMREKRSREASSPASANIIDAGGF----------------GAAAGPTGSFPFPFTGAPRIADERDHIPTDPASRERSLFGSGSDAGDGLA-LQRKMAAGLQTLSWHHVDVEF--PGYLPLAHNKICALQRDPVMEFLFKDGEFIVEHQA 463          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: XP_003082945.2 (Domain of unknown function DUF676, lipase-like [Ostreococcus tauri] >CEG02054.1 Domain of unknown function DUF676, lipase-like [Ostreococcus tauri])

HSP 1 Score: 135.6 bits (340), Expect = 4.000e-28
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 0
Query:   48 SATIGTPTHLAVVVHGLVGRPDDLSYLRESIEKQGHGILAHCAACNLD-KTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPE-SKTILGLTPITFMSIATPHLGVRRFTVIPL-PDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPE 265
            +A++  P HL    HGL G P+DL  L   +   G+  L H  ACN    +FDGV+AG  R+  E+R++V ANPSL  ++  GNSLGGIY+RYA  ++W+ +   T+LGL P T+++ ATPHLGV  +    L P  L +     +G++  +L LR                               F+  L +FK R AY N  +D LV + TA  HPE
Sbjct:   78 TASMDGPAHLIACAHGLAGTPEDLRALERRVAADGNA-LVHRLACNAPLNSFDGVEAGAVRIVEELREVVRANPSLRYLTLYGNSLGGIYARYAAGIMWEEKRDGTMLGLIPCTYLTTATPHLGVGPWGFFKLVPRALRYLWSKQLGRSIMELTLR--------DGEDGKLPLLARMADPETREPANFVAALGSFKRRCAYANATNDFLVSYETASLHPE 288          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: OUS45921.1 (putative serine esterase-domain-containing protein [Ostreococcus tauri])

HSP 1 Score: 134.4 bits (337), Expect = 8.900e-28
Identity = 80/214 (37.38%), Postives = 110/214 (51.40%), Query Frame = 0
Query:   54 PTHLAVVVHGLVGRPDDLSYLRESIEKQGHGILAHCAACNLD-KTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPE-SKTILGLTPITFMSIATPHLGVRRFTVIPL-PDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPE 265
            P HL    HGL G P+DL  L   +   G+  L H  ACN    +FDGV+AG  R+  E+R++V ANPSL  ++  GNSLGGIY+RYA  ++W+ +   T+LGL P T+++ ATPHLGV  +    L P  L +     +G++  +L LR                               F+  L +FK R AY N  +D LV + TA  HPE
Sbjct:    4 PAHLIACAHGLAGTPEDLRALERRVAADGNA-LVHRLACNAPLNSFDGVEAGAVRIVEELREVVRANPSLRYLTLYGNSLGGIYARYAAGIMWEEKRDGTMLGLIPCTYLTTATPHLGVGPWGFFKLVPRALRYLWSKQLGRSIMELTLR--------DGEDGKLPLLARMADPETREPANFVAALGSFKRRCAYANATNDFLVSYETASLHPE 208          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: XP_005539100.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM83064.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 133.3 bits (334), Expect = 2.000e-27
Identity = 115/412 (27.91%), Postives = 180/412 (43.69%), Query Frame = 0
Query:   56 HLAVVVHGLVGRPDDLSYLRESIEKQGHGILAHCAACNLDKTFDGVQAGGERLAAEVRQIVAANPS-LHTISFIGNSLGGIYSRYAISLLWQPESKT--ILGLTPITFMSIATPHLGVRRFTVIP-LPDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCITYGSSFEQRGHILKETLILPTVEKNDVKMEVWEIPRREWVEEEEGREGGVGVGRR-----------RGSWAVV-GEEERDRMGRLASIRLAAGGALGGENEEWMEEAMAARLNSLGWEKVAVTFRAPSFWSAHNIICALSRSRVGTYLFKKGRSVMDHAAGRI 452
            H+  +VHGL G P DL+YL  +++++  G+L H   CN  +T DG+ +GG+R+AAE+  +VA   S L  IS +G SLGG+Y R A+  L+     T  + GL P T + IATPHLGV  + ++   P   HF   +  GQTG +LFL                              +  L  +AAF  R    NL  D++V  GT+L  P+                                    TY ++   +   ++   + P       + E  ++  +  V            G R            G+W V+    ++    +  +++ +     GG + E +E  MA+ LN + W++ AV F AP +  AHN I A SR+  G +L++ GR V+DH A  +
Sbjct:   68 HVCFLVHGLQGAPGDLTYLAHALQQR--GLLVHTVQCNWRRTTDGISSGGKRVAAEIEHVVADYRSRLQWISLVGFSLGGLYVRSALETLFDDTEGTTKVAGLEPHTLICIATPHLGVSSYGLLRYCPRWSHFLAGVFAGQTGRELFL---------------LDEEQEPLLLRMAQHRAALRAMAAFSVRLLVANLSYDLMVNAGTSLVLPD---------------------------ERRYRVPVTTYEATCIHQAPHVRIWQLRPEAISASSRPETLQL--KPDVAGASVLVSPFSSGARVLYLLRSFVYFCGAWLVILCTWDQKTKKKKKNVQHS-----GGSDREDIERRMASALNQVSWDRYAVEFDAP-WIPAHNRIVAWSRNDFGAWLWRHGRPVVDHIATHV 427          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: PHJ21260.1 (serine esterase protein [Cystoisospora suis])

HSP 1 Score: 125.2 bits (313), Expect = 5.400e-25
Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 0
Query:   24 FVITMPPSEGFAAAPS-PPPTAAGHSATIGTPTHLAVVVHGLVGRPDDLSYLRESIEKQGHGILAHCAACNLDKTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPES----KTILGLTPITFMSIATPHLGVRRFTVIPLPDVLHFTPPLV 190
            F  + P S     + S P  T+ G       P  L V +HGL G   D  Y+ E ++++   +    +  N  KTFDGV+ GGERLA EVR+ V  +PSL  I FIG SLGG+Y RYA+ LL+ P S     T+ GLTP+   ++A+PHLGVRRF+ +PLP+   F  PL+
Sbjct:  196 FSSSTPASTSSVGSESLPGSTSPGVGQEPVPPLCLVVCIHGLAGAESDFRYMAERLKERSPLVRVLLSTANTGKTFDGVRKGGERLAEEVRRDVRRHPSLRYICFIGFSLGGLYMRYAVRLLYTPPSGAAPATVCGLTPLCIGTVASPHLGVRRFSYVPLPE--GFLRPLI 364          
BLAST of NO25G00850 vs. NCBI_GenBank
Match: CDP12796.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 123.6 bits (309), Expect = 1.600e-24
Identity = 77/232 (33.19%), Postives = 115/232 (49.57%), Query Frame = 0
Query:   54 PTHLAVVVHGLVGRPDDLSYLRESIEKQ-GHGILAHCAACN-LDKTFDGVQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPESK------------TILGLTPITFMSIATPHLGVRRFTVIP-------LPDVLHFTPPLVIGQTGHDLFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKRFLEPLAAFKYRRAYGNLKDDMLVPFGTALFHPE 265
            P HL V+VHG++  P D +Y+   ++K+ G   L + ++CN   KTF G+   G+RLA EV Q+V    +L  ISF+ +SLGG+++RYAIS+L+ P +              I GL PI F+++ATPHLGVR    +P       L  +     P+ IG+TG  LFL                             + +F+  L AF+ R  Y N+  D +V + T+    E
Sbjct:  119 PDHLLVLVHGILASPSDWAYVEAELKKRLGRNFLIYASSCNSYTKTFTGIDGAGKRLADEVMQVVRKQETLKKISFVAHSLGGLFARYAISVLYTPNNSGHPYDLSASTKGLIAGLEPINFITLATPHLGVRGNKQLPFLLGVPFLEKIAAPLAPIFIGRTGSQLFL----------TDGKPNKPPLLLRMASDCEDGKFISALGAFRCRVLYANVSYDHMVGWRTSSIRRE 340          
The following BLAST results are available for this feature:
BLAST of NO25G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21568.18.100e-10650.68hydrolase-like protein [Nannochloropsis gaditana][more]
CBJ48764.12.200e-5041.16putative serine esterase [Ectocarpus siliculosus][more]
XP_005831493.11.700e-4245.58hypothetical protein GUITHDRAFT_109633 [Guillardia... [more]
XP_005759502.12.000e-3240.09hypothetical protein EMIHUDRAFT_350772 [Emiliania ... [more]
XP_002504771.14.000e-2829.58predicted protein [Micromonas commoda] >ACO66029.1... [more]
XP_003082945.24.000e-2836.82Domain of unknown function DUF676, lipase-like [Os... [more]
OUS45921.18.900e-2837.38putative serine esterase-domain-containing protein... [more]
XP_005539100.12.000e-2727.91hypothetical protein, conserved [Cyanidioschyzon m... [more]
PHJ21260.15.400e-2542.69serine esterase protein [Cystoisospora suis][more]
CDP12796.11.600e-2433.19unnamed protein product [Coffea canephora][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004345NSK004345Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00850.1NO25G00850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546439gene_8570Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g53gene8826Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00850.1NO25G00850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00850 ID=NO25G00850|Name=NO25G00850|organism=Nannochloropsis oceanica|type=gene|length=1407bp
ACAGGCATCATCCCAGGTCGAATGGTCCATTTCTCATTGTCTTCCTTGCT
GCTATCCCTGCGCTTTTCCACATCACTGCTCATCTGCTCCTTCGTCATCA
CCATGCCCCCCTCCGAAGGCTTTGCCGCCGCGCCTAGCCCCCCTCCTACC
GCTGCTGGCCACAGTGCCACCATTGGAACGCCTACGCACCTGGCTGTGGT
CGTGCACGGATTGGTAGGACGCCCCGACGACTTAAGCTATCTCCGCGAGT
CCATCGAAAAACAGGGACACGGTATTCTCGCACATTGTGCTGCATGCAAC
CTGGACAAGACTTTTGACGGGGTTCAAGCAGGTGGGGAACGCCTGGCAGC
CGAGGTCCGACAAATCGTCGCTGCCAATCCTTCTTTGCATACCATTTCGT
TCATTGGTAACAGCTTAGGAGGAATTTATTCTCGATATGCCATCTCGCTG
CTGTGGCAACCAGAGAGCAAAACCATCCTCGGCCTCACACCGATCACCTT
CATGTCAATCGCCACGCCCCACCTTGGTGTACGGCGCTTCACGGTCATCC
CTCTTCCCGACGTATTACATTTCACCCCACCGTTAGTCATCGGCCAGACG
GGACACGACCTCTTCCTCCGTCCTCCTCCCCCAAGAAGAAGCAGCAGTAG
TAGCAGCGCCAGCACCAGCGAAAGCGACCCTCCTCTCCTACTCAAGATGG
CGTCAGAGAAACGTTTTTTGGAACCCTTGGCGGCATTTAAATATCGGAGG
GCATACGGAAACTTGAAGGATGACATGCTCGTCCCGTTCGGCACGGCCTT
GTTTCACCCTGAAGGGTCCACAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGAAAGCAGT
AGTACCAGCACTAGTTGTATTACTTATGGTAGTAGTTTTGAACAGAGAGG
GCACATCTTGAAGGAAACTTTAATTTTGCCGACCGTGGAGAAGAATGATG
TCAAAATGGAGGTTTGGGAAATTCCGAGAAGGGAGTGGGTGGAGGAGGAG
GAAGGGAGGGAAGGAGGAGTGGGAGTAGGAAGAAGAAGGGGCTCTTGGGC
GGTTGTGGGTGAGGAGGAGAGAGATAGAATGGGTAGACTTGCGTCGATTC
GTTTGGCTGCTGGTGGTGCGTTGGGAGGAGAGAATGAGGAATGGATGGAG
GAAGCAATGGCAGCGAGGCTGAACAGCTTAGGCTGGGAAAAGGTTGCTGT
GACGTTTCGAGCGCCGTCATTTTGGTCAGCGCATAATATTATTTGTGCGT
TGAGTAGGAGTAGGGTGGGGACATACTTGTTTAAGAAGGGACGGAGTGTG
ATGGATCATGCGGCGGGGAGGATTGCGAGGGCAGCAGCTGAAGAGGACAG
GAGCTAG
back to top

protein sequence of NO25G00850.1

>NO25G00850.1-protein ID=NO25G00850.1-protein|Name=NO25G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MVHFSLSSLLLSLRFSTSLLICSFVITMPPSEGFAAAPSPPPTAAGHSAT
IGTPTHLAVVVHGLVGRPDDLSYLRESIEKQGHGILAHCAACNLDKTFDG
VQAGGERLAAEVRQIVAANPSLHTISFIGNSLGGIYSRYAISLLWQPESK
TILGLTPITFMSIATPHLGVRRFTVIPLPDVLHFTPPLVIGQTGHDLFLR
PPPPRRSSSSSSASTSESDPPLLLKMASEKRFLEPLAAFKYRRAYGNLKD
DMLVPFGTALFHPEGSTGGGGGGGGGGGGGGGGGGGGGGGESSSTSTSCI
TYGSSFEQRGHILKETLILPTVEKNDVKMEVWEIPRREWVEEEEGREGGV
GVGRRRGSWAVVGEEERDRMGRLASIRLAAGGALGGENEEWMEEAMAARL
NSLGWEKVAVTFRAPSFWSAHNIICALSRSRVGTYLFKKGRSVMDHAAGR
IARAAAEEDRS*
back to top
Synonyms
Publications