NO25G00800, NO25G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00800 vs. NCBI_GenBank
Match: EWM21627.1 (charged multivesicular body protein [Nannochloropsis gaditana]) HSP 1 Score: 189.9 bits (481), Expect = 8.700e-45 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSV 106 MGNMWAKKPLKEIMRENKRMI RAIRELDRER NLE+NEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMA+AMRSV Sbjct: 9 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSV 113
BLAST of NO25G00800 vs. NCBI_GenBank
Match: EWM21628.1 (charged multivesicular body protein [Nannochloropsis gaditana]) HSP 1 Score: 189.9 bits (481), Expect = 8.700e-45 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSV 106 MGNMWAKKPLKEIMRENKRMI RAIRELDRER NLE+NEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMA+AMRSV Sbjct: 1 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSV 105
BLAST of NO25G00800 vs. NCBI_GenBank
Match: CBN73857.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 169.9 bits (429), Expect = 9.300e-39 Identity = 91/118 (77.12%), Postives = 102/118 (86.44%), Query Frame = 0 Query: 7 KKPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 KKPLKEI+RENKR ITRA+R++DRE+ NLE+ EKKL+ +IKK AK QMGAVK +AKDLVRTRNY TKFIE RSHLQG LKLETVRSHEAMA AM+ VT AMVS+NKQVNVPAL KI Sbjct: 11 KKPLKEILRENKRTITRAVRDIDREKANLEKQEKKLVGEIKKNAKAGQMGAVKVLAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMAGAMKDVTKAMVSLNKQVNVPALQKI 128
BLAST of NO25G00800 vs. NCBI_GenBank
Match: XP_002183441.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC45141.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 164.1 bits (414), Expect = 5.100e-37 Identity = 87/125 (69.60%), Postives = 104/125 (83.20%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN+W + KPLKE++RENKRMI RA+RELDRE+ LER EK+L ++IKK AKENQM +VK MAKDLVRTR Y TKFIEMRSHLQG ALKL+TV+SH+AMA AM++ AM MNK VNVP +TK+ Sbjct: 1 MGNVWGRDKPLKEVLRENKRMINRAVRELDREKAGLEREEKRLTIEIKKAAKENQMQSVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHQAMAEAMQNTAKAMGKMNKAVNVPTITKM 125
BLAST of NO25G00800 vs. NCBI_GenBank
Match: OEU23706.1 (Snf7-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 162.9 bits (411), Expect = 1.100e-36 Identity = 91/125 (72.80%), Postives = 102/125 (81.60%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN+ K KPLKE++RENKRMITRAIRELDRE+ LER EKKL M+IKK AK QMG VK MAKDLVRTR Y TKFIEMRSHLQG ALKL+TV+SH AMA AM+S SAM MNK V+VPA+ K+ Sbjct: 1 MGNILGKDKPLKEVLRENKRMITRAIRELDREKTGLEREEKKLTMEIKKCAKAGQMGPVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMAEAMKSTASAMHKMNKAVDVPAINKM 125
BLAST of NO25G00800 vs. NCBI_GenBank
Match: XP_009032350.1 (hypothetical protein AURANDRAFT_18982 [Aureococcus anophagefferens] >EGB12696.1 hypothetical protein AURANDRAFT_18982 [Aureococcus anophagefferens]) HSP 1 Score: 161.0 bits (406), Expect = 4.300e-36 Identity = 86/125 (68.80%), Postives = 104/125 (83.20%), Query Frame = 0 Query: 1 MGNMWAKK-PLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN W +K PLKE++R+NKR I +A+RELDRER NLE+ E+KLI DIKKYA + QMG+VK MAKDLVRTR Y TKFIE+RSHL +LKL+TV+S EAMA+AM+SVT AM+ MNK VNVPA+ KI Sbjct: 1 MGNTWGRKVPLKEVLRKNKREINKAMRELDRERANLEKQEQKLIADIKKYAGQGQMGSVKIMAKDLVRTRTYITKFIELRSHLGAVSLKLQTVKSQEAMASAMKSVTQAMIKMNKTVNVPAVQKI 125
BLAST of NO25G00800 vs. NCBI_GenBank
Match: XP_002780352.1 (Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983] >EER12147.1 Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 151.0 bits (380), Expect = 4.500e-33 Identity = 80/124 (64.52%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN +K L+E MR NKRMI RA+RELDRER+ L+RNE+KLI DIK+ AK+NQMG VK MAKDLVRTR Y++KF+EM+SHLQG +L+++TV+S EAMA +M+ T AM MNKQ+N+P L KI Sbjct: 1 MGNQSSKLTLEEQMRANKRMINRAVRELDRERMGLQRNEQKLITDIKQAAKKNQMGPVKIMAKDLVRTRRYESKFLEMKSHLQGVSLRMQTVKSTEAMARSMKGCTQAMARMNKQLNLPQLQKI 124
BLAST of NO25G00800 vs. NCBI_GenBank
Match: XP_002780871.1 (Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983] >EER12666.1 Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 151.0 bits (380), Expect = 4.500e-33 Identity = 80/124 (64.52%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN +K L+E MR NKRMI RA+RELDRER+ L+RNE+KLI DIK+ AK+NQMG VK MAKDLVRTR Y++KF+EM+SHLQG +L+++TV+S EAMA +M+ T AM MNKQ+N+P L KI Sbjct: 1 MGNQSSKLTLEEQMRANKRMINRAVRELDRERMGLQRNEQKLITDIKQAAKKNQMGPVKIMAKDLVRTRRYESKFLEMKSHLQGVSLRMQTVKSTEAMARSMKGCTQAMARMNKQLNLPQLQKI 124
BLAST of NO25G00800 vs. NCBI_GenBank
Match: XP_002775819.1 (Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983] >EER07635.1 Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 150.2 bits (378), Expect = 7.600e-33 Identity = 80/124 (64.52%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN +K L+E MR NKRMI RA+RELDRER+ L+RNE+KLI DIK+ AK+NQMG VK MAKDLVRTR Y++KF+EM+SHLQG +L+++TV+S EAMA +M+ T AM MNKQ+N+P L KI Sbjct: 1 MGNQPSKLTLEEQMRANKRMINRAVRELDRERMGLQRNEQKLITDIKQAAKKNQMGPVKIMAKDLVRTRRYESKFMEMKSHLQGVSLRMQTVKSTEAMARSMKGCTQAMARMNKQLNLPQLQKI 124
BLAST of NO25G00800 vs. NCBI_GenBank
Match: XP_012197832.1 (hypothetical protein SPRG_03845 [Saprolegnia parasitica CBS 223.65] >KDO31227.1 hypothetical protein SPRG_03845 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.1 bits (331), Expect = 2.100e-27 Identity = 76/125 (60.80%), Postives = 95/125 (76.00%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMITRAIRELDRERVNLERNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMATAMRSVTSAMVSMNKQVNVPALTKI 125 MGN+ AK K LKE +RENKR I RAIR+LDRER NL+ EKKLI++IKK AKENQ+ +VK MAKDLVRTR + TKF MRS LQ +L++ET +S EAM +A+++ T M SM K +N+P L KI Sbjct: 1 MGNLGAKPKTLKEQLRENKREINRAIRDLDRERTNLQMAEKKLIIEIKKMAKENQIASVKIMAKDLVRTRQHITKFYTMRSQLQAVSLRMETAKSAEAMTSALQNTTKVMKSMAKTMNLPKLNKI 125 The following BLAST results are available for this feature:
BLAST of NO25G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00800 ID=NO25G00800|Name=NO25G00800|organism=Nannochloropsis oceanica|type=gene|length=3065bpback to top protein sequence of NO25G00800.1 >NO25G00800.1-protein ID=NO25G00800.1-protein|Name=NO25G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bpback to top Synonyms
Publications
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