NO25G00780, NO25G00780 (gene) Nannochloropsis oceanica

Overview
NameNO25G00780
Unique NameNO25G00780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3508
Alignment locationchr25:213547..217054 -

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Properties
Property NameValue
DescriptionRibosomal rna methyltransferase nop2-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:213547..217054 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR001678MeTrfase_RsmB/NOP2
IPR031341Methyltr_RsmF_N
IPR023273RCMT_NOP2
IPR023267RCMT
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_005854214.1 (ribosomal rna methyltransferase nop2 [Nannochloropsis gaditana CCMP526] >EKU22153.1 ribosomal rna methyltransferase nop2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 656.0 bits (1691), Expect = 1.500e-184
Identity = 338/440 (76.82%), Postives = 371/440 (84.32%), Query Frame = 0
Query:  244 WKTLGLSGEVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEEGTKGGKEGGKKERKAAKGRKEVVEEDGMEVDGEGKKEEAVPELKPIPTTKKGKE-----VKAKGKEGQKRG 679
            W   GL+  +K+RIEEVV ILSDF+ RRK GVAR EYV+QL RDLS+H+GYLPELT MFL+M  PAECVEFMAAND+PRPLV+RANTLKTRRKDL QAL+KRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQP ERVLDLSAAPGGKASYCAQLMKNTGLLV NDLK ERQKAT+ NLHRLGVRNA+VCSYDGRRLPSVMKGFDR LLD+PCSGLGIVARDQSVK+QRT++D+ KMSHLQ+ELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYIL+ARPNVRVVPTGLG+FGRPGFTRV EHRFHPSL L RRFYPHVHNMDGFFVCKLQK++N         G  E  ++ER  AKG+K     DG  V+  G +       K +   +KG+E     +K K K  Q +G
Sbjct:  206 WPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTN------ALPGKNE--EEERAEAKGKKRKQMRDGENVESRGNETR-----KGVQKVEKGEEEAPFRIKKKKKGSQPQG 632          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: EWM21577.1 (ribosomal rna methyltransferase nop2-like protein [Nannochloropsis gaditana])

HSP 1 Score: 656.0 bits (1691), Expect = 1.500e-184
Identity = 338/440 (76.82%), Postives = 371/440 (84.32%), Query Frame = 0
Query:  244 WKTLGLSGEVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEEGTKGGKEGGKKERKAAKGRKEVVEEDGMEVDGEGKKEEAVPELKPIPTTKKGKE-----VKAKGKEGQKRG 679
            W   GL+  +K+RIEEVV ILSDF+ RRK GVAR EYV+QL RDLS+H+GYLPELT MFL+M  PAECVEFMAAND+PRPLV+RANTLKTRRKDL QAL+KRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQP ERVLDLSAAPGGKASYCAQLMKNTGLLV NDLK ERQKAT+ NLHRLGVRNA+VCSYDGRRLPSVMKGFDR LLD+PCSGLGIVARDQSVK+QRT++D+ KMSHLQ+ELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYIL+ARPNVRVVPTGLG+FGRPGFTRV EHRFHPSL L RRFYPHVHNMDGFFVCKLQK++N         G  E  ++ER  AKG+K     DG  V+  G +       K +   +KG+E     +K K K  Q +G
Sbjct:  215 WPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTN------ALPGKNE--EEERAEAKGKKRKQMRDGENVESRGNETR-----KGVQKVEKGEEEAPFRIKKKKKGSQPQG 641          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_002290080.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED91832.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 478.8 bits (1231), Expect = 3.400e-131
Identity = 251/429 (58.51%), Postives = 327/429 (76.22%), Query Frame = 0
Query:  252 EVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMK-GFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKT-GGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEEGTKGGKEGGKKERKAAKGRKEVVEEDGMEVDGEGKKEEAVPELKPIPTTKKGKEVKAKGKEGQKRG 679
            E++ RIE+V+E+L+DFK RR+ G +R +Y+++LA+D+++ +GYL EL   FLSMF P EC+EF+ A+DKPRPLV+R NTLK RRKDL  AL+KRGV L+PLA  WSKV LKI +S VP+GATPEYLAGHY+LQSA+SM PVMAL PQPG+RVLD+SAAPGGK SY +QLMKN G+++ NDLKPERQKATV NLHRLGVRN + C YDGR++ + ++  FDR+LLD+PCSGLG+++RD SVK+QRTI D+ + +HLQKELL AA+D ++A SK  GG +VYSTCSVAV ENE VV+Y+L  R +V++V TGL +FG+PGFTR    RFHPSL L RRFYPHVHNMDGF+V K+QK+S+           K+ G++++ A    +E V E  +E DG+ + EE + E K +      K   +  K  +KRG
Sbjct:   84 ELRARIEDVLEVLADFKTRREPGRSRSDYIERLAQDMAELFGYLQELVDYFLSMFGPNECLEFLEASDKPRPLVVRVNTLKARRKDLAAALMKRGVRLDPLA-PWSKVGLKIYESTVPIGATPEYLAGHYMLQSAASMCPVMALGPQPGDRVLDMSAAPGGKTSYVSQLMKNKGVVIANDLKPERQKATVANLHRLGVRNVVTCVYDGRKIGNQLRNSFDRILLDAPCSGLGVISRDPSVKVQRTIPDVQRCAHLQKELLLAAIDALNAKSKKGGGCMVYSTCSVAVAENEEVVNYLLSKR-DVKLVETGL-DFGKPGFTRFEHKRFHPSLALTRRFYPHVHNMDGFYVAKIQKLSD-----------KKKGEEDKNAVS--EENVNE--VEADGKNEAEEVILEKKQVVKVDGNKH--STKKNDKKRG 492          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_009040013.1 (hypothetical protein AURANDRAFT_59367 [Aureococcus anophagefferens] >EGB05368.1 hypothetical protein AURANDRAFT_59367 [Aureococcus anophagefferens])

HSP 1 Score: 477.2 bits (1227), Expect = 9.900e-131
Identity = 236/350 (67.43%), Postives = 282/350 (80.57%), Query Frame = 0
Query:  256 RIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMS 606
            RI+E + +L  FK R K G AR EY+++L  DL+ +YGYL ELT +FL++F+P+ECVEFM ANDKPRP+VIR NTLKTRRKDL Q L+KRGV LEP+A  WSKVALKI +S VPVGATPEYLAGHY+LQSA+S  PV+AL P+PGERVL+L+AAPGGK+SYCAQLMKN+G LVCNDLK ER KATV NLHRLGV NA+VC +DGR  P VM GFDRVLLD+PC+GLG+++RDQS+K  RT+ D+ K++HLQKEL+ AA+D VD   K  GV+VYSTCSVAV ENE VV Y L  R NV++V  GL  F    F R G+ R+HPS+ LARRFYPH HNMDGFFV KLQK+S
Sbjct:   17 RIQENLGVLGHFKERAKKGKARAEYLRELGEDLTSYYGYLQELTELFLTIFSPSECVEFMDANDKPRPVVIRTNTLKTRRKDLAQTLIKRGVHLEPMA-AWSKVALKITESSVPVGATPEYLAGHYMLQSAASQCPVLALGPEPGERVLELAAAPGGKSSYCAQLMKNSGTLVCNDLKKERHKATVANLHRLGVSNAVVCCHDGRAFPGVMGGFDRVLLDAPCTGLGVISRDQSIKGTRTLEDVKKLAHLQKELILAAIDSVD--DKKAGVVVYSTCSVAVLENEDVVQYALDKR-NVKLVDAGL-PFACDAFVRCGQKRYHPSMALARRFYPHTHNMDGFFVAKLQKLS 361          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_008866825.1 (ribosomal RNA small subunit methyltransferase B [Aphanomyces invadans] >ETW05387.1 ribosomal RNA small subunit methyltransferase B [Aphanomyces invadans])

HSP 1 Score: 473.8 bits (1218), Expect = 1.100e-129
Identity = 226/357 (63.31%), Postives = 292/357 (81.79%), Query Frame = 0
Query:  250 SGEVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSN 607
            +G+V  RI++++E+L+ FK RR+   +R EY+ QL  D++ ++GY  EL  +FL MF+PAEC+EF+ AN++PRPLVIRANTLKTRR+DL QAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS  PV+ALAP+P ER+LD+  APGGK +Y AQLM+N+G L+ NDLK +R KATV NLHRLGV+N  V +YDGR+LP+V +GFDRVLLD+PC+G+G++ARD S+K Q++  D+L+++HLQKELL AA+D VDA S +GGV+VYSTCSV VEENE VVDY L+ R  V++V +GL E G+PGFTR  + RFHPS+ L RRFYPHVHNMDGFFV K +K +N
Sbjct:  156 AGDVYQRIKDIIEVLAQFKERREQHRSRSEYIDQLTTDMASYFGYNRELMVLFLQMFSPAECLEFIEANEQPRPLVIRANTLKTRRRDLAQALIQRGVNLDPLA-KWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSFGPVLALAPEPNERILDMCCAPGGKTTYVAQLMRNSGSLIANDLKKQRLKATVANLHRLGVKNCAVSNYDGRKLPTVFQGFDRVLLDAPCTGMGVIARDPSIKTQKSEKDVLRLAHLQKELLLAAIDAVDAKSASGGVVVYSTCSVMVEENEAVVDYALRKRA-VKLVDSGL-EHGKPGFTRYQQQRFHPSVALTRRFYPHVHNMDGFFVAKFKKYAN 509          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: GAY01770.1 (ribosomal RNA methyltransferase nop2-like protein [Pythium insidiosum])

HSP 1 Score: 473.0 bits (1216), Expect = 1.900e-129
Identity = 233/361 (64.54%), Postives = 289/361 (80.06%), Query Frame = 0
Query:  252 EVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEE 613
            EV  RI++V+E+LS FK RR+ G +R EYV+ LA DL++++GY  EL  MF+ MF+PAEC+EF+ AN++PRPLVIR NTLKTRR+DL  AL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASSM  VMALAPQ  ERVLD++ APGGK +Y +QLMKNTG ++ NDLK +R KATV NLHRLGV+N  V  YDGR++PS+ KGFDRVLLD+PC+GLG++ARD S+K Q+T  D+ +++HLQKELL AA+D VDA S TGG +VYSTCSV VEENE VVDY LK R  V++V TGL + G+ GFTR  + RFHPS+ L RRFYPHVHNMDGF+V K +K +N    EE
Sbjct:  176 EVYQRIKDVIEVLSHFKERREPGRSRVEYVETLAADLANYFGYNRELIDMFMQMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLATALIQRGVNLDPLA-KWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSMCAVMALAPQLNERVLDMACAPGGKTTYISQLMKNTGTVIANDLKKQRLKATVANLHRLGVKNCTVSCYDGRKVPSLFKGFDRVLLDAPCTGLGVIARDPSIKTQKTEKDVQRLAHLQKELLLAAIDAVDAKSATGGYIVYSTCSVMVEENEAVVDYALKKR-CVKLVDTGL-DHGKAGFTRYQQQRFHPSVNLTRRFYPHVHNMDGFYVAKFKKYANTLPSEE 533          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_009517148.1 (hypothetical protein PHYSODRAFT_476935 [Phytophthora sojae] >EGZ29873.1 hypothetical protein PHYSODRAFT_476935 [Phytophthora sojae])

HSP 1 Score: 471.9 bits (1213), Expect = 4.100e-129
Identity = 231/361 (63.99%), Postives = 289/361 (80.06%), Query Frame = 0
Query:  252 EVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEE 613
            EV  RI++VVE+LS F  RR+ G +R +YV+ LA+DL+ ++GY  EL  MFL MF+PAECVEF+ AN++PRPLVIR NTLK RR+DL QAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS+  VMALAPQ  ERVLD++ APGGK +Y AQLMKNTG ++ NDLK +R KATV NLHRLGV+N  V  YDGR++PS+ KGFDRVLLD+PC+G+G++ARD S+K Q+   D+ +++HLQKELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY L+ R  V++V TGL + G+PGFTR  + RFHPS+ L RRFYPHVHNMDGF+V K +K +N    EE
Sbjct:   34 EVYQRIKDVVEVLSHFSARREPGRSRVDYVESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLA-KWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEE 391          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_009832210.1 (ribosomal RNA small subunit methyltransferase B [Aphanomyces astaci] >ETV78629.1 ribosomal RNA small subunit methyltransferase B [Aphanomyces astaci])

HSP 1 Score: 471.5 bits (1212), Expect = 5.400e-129
Identity = 230/380 (60.53%), Postives = 298/380 (78.42%), Query Frame = 0
Query:  250 SGEVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEEGTKGGKEGGKKERKAAK 630
            +G+V  R+++++E+L+ FK RR+   +R EY+ QL  D++ ++GY  EL  +FL MF+PAEC+EF+ AN++PRPLVIRANTLKTRR+DL QAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS  PV++LAP+P ER+LD+ AAPGGK +Y AQLM+N+G LV NDLK +R KATV NLHRLGV+N  V +YDGR+LP+V  GFDRVLLD+PC+G+G++ARD S+K Q+T  D+ +++HLQKELL AA+D VDA S +GGV+VYSTCSV VEENE VVDY L+ R  V++V  GL E G+PGFTR  + RFHPS+GL RRFYPHVHNMDGFFV K +K +N     +     ++ G  +R   K
Sbjct:  158 AGDVYQRVKDIIEVLAQFKERREQHRSRSEYIDQLTTDMASYFGYNRELMVLFLQMFSPAECLEFIEANEQPRPLVIRANTLKTRRRDLAQALIQRGVNLDPLA-KWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSFGPVLSLAPEPNERILDMCAAPGGKTTYVAQLMRNSGSLVANDLKKQRLKATVANLHRLGVKNCAVANYDGRKLPAVFTGFDRVLLDAPCTGMGVIARDPSIKTQKTEKDVHRLAHLQKELLLAAIDAVDAKSASGGVVVYSTCSVMVEENEAVVDYALRKRA-VKLVDAGL-EHGKPGFTRYQQQRFHPSVGLTRRFYPHVHNMDGFFVAKFKKYANALTHRDTDDNIEDDGLSKRAKRK 534          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: XP_002907645.1 (ribosomal RNA methyltransferase nop2-like protein [Phytophthora infestans T30-4] >EEY64209.1 ribosomal RNA methyltransferase nop2-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 471.5 bits (1212), Expect = 5.400e-129
Identity = 231/361 (63.99%), Postives = 289/361 (80.06%), Query Frame = 0
Query:  252 EVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEE 613
            EV  RI++VVE+LS F  RR+ G +R +YV+ LA+DL+ ++GY  EL  MFL MF+PAECVEF+ AN++PRPLVIR NTLK RR+DL QAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS+  VMALAPQ  ERVLD++ APGGK +Y AQLMKNTG ++ NDLK +R KATV NLHRLGV+N  V  YDGR++PS+ KGFDRVLLD+PC+G+G++ARD S+K Q+   D+ +++HLQKELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY L+ R  V++V TGL + G+PGFTR  + RFHPS+ L RRFYPHVHNMDGF+V K +K +N    EE
Sbjct:  167 EVYQRIKDVVEVLSHFSARREPGRSRVDYVESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLA-KWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTVIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEE 524          
BLAST of NO25G00780 vs. NCBI_GenBank
Match: GAY05935.1 (ribosomal RNA methyltransferase nop2-like protein [Pythium insidiosum])

HSP 1 Score: 471.1 bits (1211), Expect = 7.100e-129
Identity = 232/361 (64.27%), Postives = 288/361 (79.78%), Query Frame = 0
Query:  252 EVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTSMFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPGERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVRNALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDILKMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKARPNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCKLQKMSNVWEKEE 613
            EV  RI++V+E+LS FK RR+ G +R EYV+ LA DL++++GY  EL  MF+ MF+PAEC+EF+ AN++PRPLVIR NTLKTRR+DL  AL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASSM  VMALAPQ  ERVLD++ APGGK +Y +Q MKNTG ++ NDLK +R KATV NLHRLGV+N  V  YDGR++PS+ KGFDRVLLD+PC+GLG++ARD S+K Q+T  D+ +++HLQKELL AA+D VDA S TGG +VYSTCSV VEENE VVDY LK R  V++V TGL + G+ GFTR  + RFHPS+ L RRFYPHVHNMDGF+V K +K +N    EE
Sbjct:  176 EVYQRIKDVIEVLSHFKERREPGRSRVEYVETLAADLANYFGYNRELIDMFMQMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLATALIQRGVNLDPLA-KWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSMCAVMALAPQLNERVLDMACAPGGKTTYISQXMKNTGTVIANDLKKQRLKATVANLHRLGVKNCTVSCYDGRKVPSLFKGFDRVLLDAPCTGLGVIARDPSIKTQKTEKDVQRLAHLQKELLLAAIDAVDAKSATGGYIVYSTCSVMVEENEAVVDYALKKR-CVKLVDTGL-DHGKAGFTRYQQQRFHPSVNLTRRFYPHVHNMDGFYVAKFKKYANTLPSEE 533          
The following BLAST results are available for this feature:
BLAST of NO25G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854214.11.500e-18476.82ribosomal rna methyltransferase nop2 [Nannochlorop... [more]
EWM21577.11.500e-18476.82ribosomal rna methyltransferase nop2-like protein ... [more]
XP_002290080.13.400e-13158.51predicted protein, partial [Thalassiosira pseudona... [more]
XP_009040013.19.900e-13167.43hypothetical protein AURANDRAFT_59367 [Aureococcus... [more]
XP_008866825.11.100e-12963.31ribosomal RNA small subunit methyltransferase B [A... [more]
GAY01770.11.900e-12964.54ribosomal RNA methyltransferase nop2-like protein ... [more]
XP_009517148.14.100e-12963.99hypothetical protein PHYSODRAFT_476935 [Phytophtho... [more]
XP_009832210.15.400e-12960.53ribosomal RNA small subunit methyltransferase B [A... [more]
XP_002907645.15.400e-12963.99ribosomal RNA methyltransferase nop2-like protein ... [more]
GAY05935.17.100e-12964.27ribosomal RNA methyltransferase nop2-like protein ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004354NSK004354Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00780.1NO25G00780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546425gene_8563Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g60gene8833Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00780.1NO25G00780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00780 ID=NO25G00780|Name=NO25G00780|organism=Nannochloropsis oceanica|type=gene|length=3508bp
GAGTGGGCGCTGCTCCCTATAGCTATGTCCAAATGAGGTGGAGGGGGAAG
GAGTCCGTGCGTGGCACATGACACATACGTAAGGAGATATGGCAAAAGAC
ACAGAATGCATTTATCGGGCTCCTCCGTCTGTCCAATGTTTCAAATCAGT
GGACATTCACGCACCACACCGCGCTTCTCGCCCCTATAGCTGCGGCCGAG
GCGTGCACCGCAAACGCCTCGGGATTTTTTTGTGAGCACGTGAACGCCGG
GCGTGGCCGAGTGCGTTGACATGGGATTAGCTTTCCTTGCCTTCGCTTAA
CGCGTGGCGAAGAGACTCCTCGTGGGCCAAAGAGACAAGCATGCCTTGAT
ATCTTACGAGCCCGCGTTTTTCTCCCAAGCACCTCGCACCCCAAGGACAA
GTGCACAGCACACTGATCATCGTGCTATCCATATTCTTTGACGTGCAAGT
GAAATTGCATTTTTAGGGGGCACCCGTTGCTGGTCGACCTCCCCTCCCTC
CCCACCCACCAATTACCTCCCCACCTTTCCTTTCCACAACCCAAGCATAC
GACACGCTTAAGGTCAAGCACGACCAAAGAGTTATGGGAACGAAGAAAAA
GACGGCCCCTCTCGGCGGGGCACTGGCGACCAGCCGTGGGAATGAACCTG
GTGGGGCTTCCGTAGCCGCCGTGACCGCCAAGGGCAAGAGCAAGCAGCAG
CAGCAGCAGCAACAACAACAACAACAACAACAACAACAACAACCGCAACG
CCGCCCCCCCACCACCTTGCAGGTCCTAGGTACTCTGAAGAAGGGTGCAA
AGCAGCAACATCGTCAGCAGCAGCAGCAGGGGAAGAACAAGAAGAGGGGC
AAGGCGCCCAAGCCCGACAGTGATGGTGAAGAGAGTGAGGATGAGGAAGA
GAAAGAAGAGGAGGAAGAGGAAGAAGAGGAGGATGAGGAGGAAAAGGAAG
AGGAAGAGGAAGAAGCGATGGAGGAGTCCGAGTCGGAGAGAGTGGACGAA
GAGACTCTGCCCAAGGGCGTTGCGGGTTTCACAGACGACAATCAGTCGTG
GTTGAAGCCCAAGAAGAGCAGCAAGAAGAATGCGCTGTTGTCATCGGATG
AGGAGGGGGAGGGAAGCGAGAGTCAGGGAGAGGATGAATCAGAGGACTTG
GACAGGGACGACGATGACTTGTTGCTGGGGGGAAGCAGTGATGAGGAAGA
GATGGAGGAGGATGACGAGGCAGAGCCGCAGGAGGAGTATGAGGAGGAAT
ATGAGGAAGAAGGAAAGTCGGGGAGTGACGACGAGGAGGGGGAGAAGGGA
GCGAGGCGTGCATGGAAAACGTTGGGATTATCAGGTGAGGTCAAGGATAG
GATTGAGGAGGTGGTGGAGATCTTATCTGACTTCAAGGTACGAAGGAAAA
CGGGGGTGGCGAGGCCCGAGTACGTGAAACAGCTCGCAAGGGACTTAAGT
GACCATTACGGGTACCTGCCGGAATTAACGTCCATGTTTCTCTCCATGTT
CGCCCCTGCGGAATGCGTGGAGTTCATGGCCGCGAACGACAAGCCGCGCC
CCCTCGTCATTCGCGCCAACACCCTCAAGACCCGACGGAAGGACCTCGGC
CAAGCTCTCGTCAAACGCGGGGTTAGCCTGGAGCCTCTTGCAGGGGGATG
GTCGAAGGTGGCCTTGAAAATTATCGATTCCCAAGTGCCGGTAGGGGCGA
CTCCCGAGTATCTCGCCGGCCATTACATCTTGCAGTCTGCCTCGTCGATG
ACGCCGGTGATGGCCCTGGCGCCGCAGCCGGGGGAAAGGGTGTTGGACTT
GAGTGCGGCACCAGGAGGAAAAGCCAGCTATTGTGCGCAGTTGATGAAGA
ACACTGGATTGTTGGTGTGCAACGACCTCAAGCCCGAGCGACAGAAGGCA
ACCGTTGGAAATTTGCATCGGTTGGGCGTGCGCAATGCCTTGGTGTGTAG
CTATGATGGGCGGCGGCTACCGAGCGTGATGAAGGGCTTCGATCGCGTGC
TGCTGGACTCACCCTGTTCGGGCCTGGGgtgagttttccctctctctccc
tccctccctttatctttccctcctaaccaatatccctttcattccttttg
tttcccttttcttctgactcctccttgcctcctttccccccctcagGATC
GTGGCCAGGGATCAGTCAGTTAAAATTCAACGGACAATCAGCGACATTTT
GAAAATGAGCCACTTACAGAAAGAGTTGCTGCGCGCTGCCGTTGACTGCG
TGGACGCAGGGAGCAAGACAGGGGGGGTGCTCGTGTACTCCACCTGCTCG
GTGGCCGTCGAAGAGAACGAGCTCGTCGTTGATTACATTCTCAAGGCCCG
CCCCAATGTCCGTGTCGTCCCTACGGGGCTTGGGGAGTTTGGCAGGCCCG
GATTTACACGAGTGGGGGAACATCGGTTTCACCCGAGCCTCGGCCTGGCG
AGGAGGTTCTATCCTCATGTCCACAATATGGATGGGTTTTTCGTATGCAA
GCTGCAAAAGATGTCGAATGTGTGGGAGAAGGAGGAGGGGACGAAGGGGG
GGAAAGAGGGGGGGAAGAAGGAGAGAAAGGCGGCCAAGGGGAGGAAGGAA
GTGGTGGAGGAGGACGGGATGGAGGTAGATGGGGAAGGGAAGAAGGAAGA
GGCGGTTCCTGAGTTGAAGCCGATTCCGACGACAAAGAAGGGGAAGGAGG
TAAAGGCGAAAGGGAAGGAGGGACAGAAAAGAGGAGCAGGGGTGCCCGCC
GGCAACAAGGGAGGGGGAGCAGTAGCAGCAGCAGGAGGGAAAGTGACAAC
GGAAGCTGCAGCGAAGAGTAATAAGGATAAACAGAAGAAGAAGAAAGTCA
CGCCCGCTGCTGCTGCTCCTCCTCCACCCCCTCCCCTTTCTCCTCCTATC
GTGATAGCGAAAAAGCGAAAGGCAGAGGGGAAGAGGGACAAGGATATGAA
GAATTGTAGGAAGGATCAGGCAGTGAAGAAAAGTAAAAAGGAGGATGTGG
CAAAAGAGGAACAGTCGAAGGGTGAAAAGAAAGAGAGAAAGGGGAAGAAG
GAGGAGGGAAAGCAGCTGCAGCAGCCGGAGAAGAAGACTCTTCCGACGGC
GAAGAAGGCAAAAAAGGAAAAAAAGGAAACGAAAACGGAGGGAGAGAAGT
AGTGGAGGAATAAAGGAGGATGGACAAAAAGAGAAGCTGCTGCAGGAGCT
GCAGGAGGAGGAGCGGCGGAGGATGGTGGACACGGCCTGCACAAAGCAAG
AAGACGGCGCTTGTCGATCTGAGTACTTATGGTCGAGAAGCTGAAGGAAT
TTTCAGCAGCGGTACCAGCAGCAGCAGCAGGATGAGGATGAACAGGAGCA
GTAGCAGCACCAATAACACCAAAAACAACACCAACATTTTGAAAGCCCGC
GAAGCCGAGGAGTACAAGGAGGAGGGGGGACGCGCTCTCTGTAAAATCAA
GGATGAGATTCGCACGAAAGAGGGCGACCACTCTATGATCAAGTCATTTG
GGCAGACG
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protein sequence of NO25G00780.1

>NO25G00780.1-protein ID=NO25G00780.1-protein|Name=NO25G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=817bp
MGTKKKTAPLGGALATSRGNEPGGASVAAVTAKGKSKQQQQQQQQQQQQQ
QQQPQRRPPTTLQVLGTLKKGAKQQHRQQQQQGKNKKRGKAPKPDSDGEE
SEDEEEKEEEEEEEEEDEEEKEEEEEEAMEESESERVDEETLPKGVAGFT
DDNQSWLKPKKSSKKNALLSSDEEGEGSESQGEDESEDLDRDDDDLLLGG
SSDEEEMEEDDEAEPQEEYEEEYEEEGKSGSDDEEGEKGARRAWKTLGLS
GEVKDRIEEVVEILSDFKVRRKTGVARPEYVKQLARDLSDHYGYLPELTS
MFLSMFAPAECVEFMAANDKPRPLVIRANTLKTRRKDLGQALVKRGVSLE
PLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPG
ERVLDLSAAPGGKASYCAQLMKNTGLLVCNDLKPERQKATVGNLHRLGVR
NALVCSYDGRRLPSVMKGFDRVLLDSPCSGLGIVARDQSVKIQRTISDIL
KMSHLQKELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILKAR
PNVRVVPTGLGEFGRPGFTRVGEHRFHPSLGLARRFYPHVHNMDGFFVCK
LQKMSNVWEKEEGTKGGKEGGKKERKAAKGRKEVVEEDGMEVDGEGKKEE
AVPELKPIPTTKKGKEVKAKGKEGQKRGAGVPAGNKGGGAVAAAGGKVTT
EAAAKSNKDKQKKKKVTPAAAAPPPPPPLSPPIVIAKKRKAEGKRDKDMK
NCRKDQAVKKSKKEDVAKEEQSKGEKKERKGKKEEGKQLQQPEKKTLPTA
KKAKKEKKETKTEGEK*
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Synonyms
Publications