NO25G00760, NO25G00760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_005854211.1 (large subunit ribosomal protein L6e [Nannochloropsis gaditana CCMP526] >EKU22150.1 large subunit ribosomal protein L6e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 380.6 bits (976), Expect = 5.500e-102 Identity = 197/229 (86.03%), Postives = 209/229 (91.27%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGGKKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE-EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPKK NKRAGKPRTT+LARGVPSLSH+ATVKKGGRY+FFGKGGKKA APA GKAPRFYPADDIPVPRRSARH+QKPTKLKAGI PGS+LIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQ VDISAVKVP T++D YFA PAD + + ILAAG GKKAT VSE RKKDQ+AVD QVL A+KKV QLDGY+KARFSLKKGVKPHEIKF Sbjct: 1 MAPKKANKRAGKPRTTLLARGVPSLSHAATVKKGGRYRFFGKGGKKAAAPAPAAGKAPRFYPADDIPVPRRSARHIQKPTKLKAGIKPGSVLIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQVVDISAVKVPDTLNDAYFAVPADVKGKETILAAGAGKKATEVSESRKKDQKAVDEQVLVAVKKVAQLDGYLKARFSLKKGVKPHEIKF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: EWM21645.1 (60s ribosomal protein l6 [Nannochloropsis gaditana]) HSP 1 Score: 378.3 bits (970), Expect = 2.700e-101 Identity = 196/228 (85.96%), Postives = 208/228 (91.23%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGGKKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE-EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIK 356 MAPKK NKRAGKPRTT+LARGVPSLSH+ATVKKGGRY+FFGKGGKKA APA GKAPRFYPADDIPVPRRSARH+QKPTKLKAGI PGS+LIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQ VDISAVKVP T++D YFA PAD + + ILAAG GKKAT VSE RKKDQ+AVD QVL A+KKV QLDGY+KARFSLKKGVKPHEIK Sbjct: 1 MAPKKANKRAGKPRTTLLARGVPSLSHAATVKKGGRYRFFGKGGKKAAAPAPAAGKAPRFYPADDIPVPRRSARHIQKPTKLKAGIKPGSVLIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQVVDISAVKVPDTLNDAYFAVPADVKGKETILAAGAGKKATEVSESRKKDQKAVDEQVLVAVKKVAQLDGYLKARFSLKKGVKPHEIK 228
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_009772155.1 (PREDICTED: 60S ribosomal protein L6-like isoform X1 [Nicotiana sylvestris]) HSP 1 Score: 204.5 bits (519), Expect = 5.400e-49 Identity = 122/238 (51.26%), Postives = 152/238 (63.87%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MA KK PR L RGV LS S K G + K G KKA AP K P+FYPADD+ P + +H KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLV+GP+ LNGVPLRRVNQAYVI TS VDIS V V +DD YFA+ A+ + EG+ +K V+ +G+K DQ+AVD ++ A++ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAAKK------SPRNPELIRGVGKLSRSKMYHKKGLWAIKKKNGGSFPVHKKAAAVAPPAVKPPKFYPADDVAKPLVN-KHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLKSGLLLVSGPFKLNGVPLRRVNQAYVIGTSTKVDISGVNV-EKIDDKYFAKQAEKKQKKGEGEFFEDKKEEKKNVLPQGKKDDQKAVDEALIKAVECVPELKAYLSARFSLKSGMKPHELVF 230
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_009772157.1 (PREDICTED: 60S ribosomal protein L6-like isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 202.2 bits (513), Expect = 2.700e-48 Identity = 123/238 (51.68%), Postives = 152/238 (63.87%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MA KK PR L RGV LS S K G + K G KKA AP K P+FYPADD+ P + +H KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLV+GP+ LNGVPLRRVNQAYVI TS VDIS V V +DD YFA+ A+ + EG+ KK V+ +G+K DQ+AVD ++ A++ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAAKK------SPRNPELIRGVGKLSRSKMYHKKGLWAIKKKNGGSFPVHKKAAAVAPPAVKPPKFYPADDVAKPLVN-KHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLKSGLLLVSGPFKLNGVPLRRVNQAYVIGTSTKVDISGVNV-EKIDDKYFAKQAEKKQKKGEGEFFEDKKEKK-NVLPQGKKDDQKAVDEALIKAVECVPELKAYLSARFSLKSGMKPHELVF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_016482422.1 (PREDICTED: 60S ribosomal protein L6-like isoform X1 [Nicotiana tabacum]) HSP 1 Score: 201.1 bits (510), Expect = 6.000e-48 Identity = 121/238 (50.84%), Postives = 151/238 (63.45%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MA KK PR L RGV LS S K G + K G KKA AP K P+FYPADD+ P + +H KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLV+GP+ LNGVPLRRVNQAYVI TS VDIS V V +DD YFA+ A+ + EG+ +K V+ +G+K DQ+AVD ++ A++ VP+L Y+ ARFSLK +KPHE+ F Sbjct: 1 MAAKK------SPRNPELIRGVGKLSRSKMYHKKGLWAIKKKNGGSFPVHKKAAAVAPPAVKPPKFYPADDVAKPLVN-KHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLKSGLLLVSGPFKLNGVPLRRVNQAYVIGTSTKVDISGVNV-EKIDDKYFAKQAEKKQKKGEGEFFEDKKEEKKNVLPQGKKDDQKAVDEALIKAVECVPELKAYLSARFSLKSCMKPHELVF 230
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_016482423.1 (PREDICTED: 60S ribosomal protein L6-like isoform X2 [Nicotiana tabacum]) HSP 1 Score: 198.7 bits (504), Expect = 3.000e-47 Identity = 122/238 (51.26%), Postives = 151/238 (63.45%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MA KK PR L RGV LS S K G + K G KKA AP K P+FYPADD+ P + +H KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLV+GP+ LNGVPLRRVNQAYVI TS VDIS V V +DD YFA+ A+ + EG+ KK V+ +G+K DQ+AVD ++ A++ VP+L Y+ ARFSLK +KPHE+ F Sbjct: 1 MAAKK------SPRNPELIRGVGKLSRSKMYHKKGLWAIKKKNGGSFPVHKKAAAVAPPAVKPPKFYPADDVAKPLVN-KHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLKSGLLLVSGPFKLNGVPLRRVNQAYVIGTSTKVDISGVNV-EKIDDKYFAKQAEKKQKKGEGEFFEDKKEKK-NVLPQGKKDDQKAVDEALIKAVECVPELKAYLSARFSLKSCMKPHELVF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: KZV50909.1 (hypothetical protein F511_10480 [Dorcoceras hygrometricum]) HSP 1 Score: 196.4 bits (498), Expect = 1.500e-46 Identity = 122/241 (50.62%), Postives = 152/241 (63.07%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTM---LARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPK PR T L RG+ S S K G + K +KA AAP T K P+FYPADD+ P + R KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLVTGP+ +NGVPLRRVNQAYVI TS VDISAV + DD YFA+ + + E + A KAT+ +E +K+DQ++VD +L AI+ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPK-------PPRVTRNPELIRGIRKASRSQMYHKRGLWAIKVKNSGKFPHHEKAAEAAPVTEKPPKFYPADDVKKPLSNKRK-SKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKINGVPLRRVNQAYVIATSTKVDISAVNLD-KYDDKYFAKKVEKKTKKGENEFFEAEKLDKATLPAE-KKEDQKSVDASLLKAIESVPELKAYLGARFSLKSGLKPHELVF 231
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_011096185.1 (60S ribosomal protein L6-like [Sesamum indicum]) HSP 1 Score: 195.7 bits (496), Expect = 2.500e-46 Identity = 119/238 (50.00%), Postives = 150/238 (63.03%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPK+ + R L GV +S S K G + K G +KA AAP K P+FYPADD+ P + R KPTKL+A I PG++LI+L+GRF+GKRVVFLKQL+SG LLVTGPY +NGVPLRRVNQAYVI TS VDIS V V DD YFA+ + + E + A +K T+ +E +K DQ+AVD +L A++ VP L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPKQ------RTRNPELIPGVRKVSRSKMYHKRGLWAIKAKNGGKFPHHEKAPAAAPVAEKPPKFYPADDVKKPLSNKRK-PKPTKLRASITPGTVLIILSGRFKGKRVVFLKQLSSGLLLVTGPYKINGVPLRRVNQAYVIATSTKVDISGVNV-EKFDDKYFAKQVEKKKKKGENEFFEAEKQEKNTLPAE-KKDDQKAVDAPLLKAVESVPDLKAYLGARFSLKAGMKPHELVF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_019435486.1 (PREDICTED: 60S ribosomal protein L6-like [Lupinus angustifolius] >XP_019437250.1 PREDICTED: 60S ribosomal protein L6-like [Lupinus angustifolius] >XP_019437251.1 PREDICTED: 60S ribosomal protein L6-like [Lupinus angustifolius] >OIW15339.1 hypothetical protein TanjilG_23883 [Lupinus angustifolius] >OIW15341.1 hypothetical protein TanjilG_23885 [Lupinus angustifolius] >OIW22075.1 hypothetical protein TanjilG_03738 [Lupinus angustifolius]) HSP 1 Score: 195.3 bits (495), Expect = 3.300e-46 Identity = 122/239 (51.05%), Postives = 150/239 (62.76%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG-------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAP K + A R L RG+ S S K G + K G KA AAPA KAP+FYPADD+ PR + +H KPTKL+A I PG++LI+LAG F+GKRVVFLKQL SG LLVTGP+ +NGVPLRRVNQAYVI TS VD+SAV V DD YF + A + EG+ A +K V+ + +K DQ+ VD+ +L AI+ VP L Y+ ARFSLK G KPHE+ F Sbjct: 1 MAPPK-QRTARVSRNPELIRGIGKYSRSKVYHKRGLWAIKAKNGGVLPRHEPKAKAAAPAE-KAPKFYPADDVKKPRLN-KHKPKPTKLRASITPGTVLILLAGHFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDVSAVNVD-KFDDKYFTKDAKKKNKKGEGEFFEAEKEEK-NVLPQEKKDDQKTVDSALLQAIQSVPDLKTYLGARFSLKSGQKPHELLF 234
BLAST of NO25G00760 vs. NCBI_GenBank
Match: ORX94405.1 (hypothetical protein K493DRAFT_315504 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 194.9 bits (494), Expect = 4.300e-46 Identity = 117/238 (49.16%), Postives = 148/238 (62.18%), Query Frame = 0 Query: 140 KPRTTMLARGVPSLSHSATVKKGGRYKFFGKGGKKAVTAAPAT-------------------GKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYF--ARPADAEEGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 K R + LA G+ LS S+ K YK +KA AAPAT KA R+YPA+D+ P+ S R V KPTKL+A I PG++L++LAGRFRGKRVVFLKQLASG LLVTGPY +NGVPLRRVNQAYV+ TS VD+S V V A DD YF + A A+ + G +K V+ E R DQ++VD ++LAA+ +VP L Y+ A F+L+KG PH +KF Sbjct: 3 KSRNSFLAPGITRLSRSSAFSKRALYKKQKVAAEKA-AAAPATTKTVKVNGEKNGSERVVSLNKASRWYPAEDVAQPKAS-RKVAKPTKLRATITPGTVLVLLAGRFRGKRVVFLKQLASGLLLVTGPYKVNGVPLRRVNQAYVLATSTKVDLSNVNVDAKFDDAYFKKEKAAKAKGTEEEFFGEEQKKKVIPESRSADQKSVDKEILAAVSQVPHLRSYLNASFTLRKGQAPHSMKF 238 The following BLAST results are available for this feature:
BLAST of NO25G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00760 ID=NO25G00760|Name=NO25G00760|organism=Nannochloropsis oceanica|type=gene|length=2377bpback to top protein sequence of NO25G00760.1 >NO25G00760.1-protein ID=NO25G00760.1-protein|Name=NO25G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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