NO25G00630, NO25G00630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00630 vs. NCBI_GenBank
Match: EWM21570.1 (cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 345.9 bits (886), Expect = 2.100e-91 Identity = 248/509 (48.72%), Postives = 293/509 (57.56%), Query Frame = 0 Query: 1 MRIISRERFGGAAFDTDPATM--AKRLHKHGEAAAQGHCPPSQHAAAPCGVGVLEGSWGNTEYQDRQWDLENNISSAARCDCGQHTFCMLPHQQDGSMDTAPNTPDFNSS-XXXXXXXXXXXXXRGRVASGETPTNSSRRHLVLLPETGLSSSSLASVAAAEGGDPADIENLSASMVQAMTRKGGSTDGAVSG----SNSNNIASSGVPSIPASFSRASFGLSSSLEQPQDH---HLPGSNHXXXXXXXXXXLPXXXRRRGSVSGADGSSRSIDRGSSLV-DGGAEESEALSLDRILVERNGDMVVVESSVVCDACPSCDDVCTLQDCRGCQEKRERLLARGLMVVVEAWGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYYSLCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKACAAEGR----XXXXXXXXXXXXXXGSLVGSSCSIM 495 MR+IS++RF +A+DT +M K+ + E ++ P ++ APCGVG L G ++ + NI AARCDCGQHTF +L G DTAP TPD + + G V G+ T+ RRH LSSS + DPADIE LSA+MVQAM K GST+G V+G S+ +++ SS P + A R S +S+ +PQDH H P H RRR SVSGADG GSS V DG E+ ALSLDRI+VE NGDMVV++ SVVCDACPSCDDVCTLQDCRGCQ+KRERLLA G+MVV EAWGRT V YSLCEIRRHRTLASCWLVAKGQVYDVT YLSSHPAGAIA+ARKAGGQDC+EDFEFHS KAQK+WK L+IGSV+ C + + XXXXXXXXGSLVGSSCSIM Sbjct: 1 MRVISQKRF-NSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNI--AARCDCGQHTFLVLASDSGG--DTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKL-TDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCK-GSTEGRVNGNRRQSHRHSLDSSEGP-VKALSPRPSVCPASA--RPQDHYRSHQPQQQH--------------QRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRT-----------TRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRXXXXXXXXGSLVGSSCSIM 474
BLAST of NO25G00630 vs. NCBI_GenBank
Match: CBJ49007.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 113.2 bits (282), Expect = 2.300e-21 Identity = 84/176 (47.73%), Postives = 106/176 (60.23%), Query Frame = 0 Query: 290 NGDMVVVESSVVCDACPSCDDVCTLQDCRGCQEKRERLLARGLMVVVEAWGR-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYYSLCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKAC 465 +G VE S VCDACP C+D C + C GC E R M + EA+G+ XXXXXXXXXXXXXXXXXXXXXXX Y+LCE+RR + +CW+V++G VYDVT L HP G ++ + AGG+DC+EDF FHS A+K W++ RIGS+ AC Sbjct: 229 SGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETR--------MHLEEAYGKLMLSAAEVXXXXXXXXXXXXXXXXXXXXXXXSRLKLAPVLSRRYPRKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVAC 396
BLAST of NO25G00630 vs. NCBI_GenBank
Match: XP_008875240.1 (hypothetical protein H310_10590 [Aphanomyces invadans] >ETV95929.1 hypothetical protein H310_10590 [Aphanomyces invadans]) HSP 1 Score: 99.0 bits (245), Expect = 4.400e-17 Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKACAAEGRXXXXXXXXXXXXXXGSLVGSSCSIM 495 LCE++RHR+L+SCWLVA G VYDVT + HPAG I RKAGG DC++D FHS +AQ+ WK+ +G + C + GS SC+IM Sbjct: 99 LCEVKRHRSLSSCWLVANGIVYDVTNVIQQHPAGTKCILRKAGGVDCTQDLRFHSKEAQQCWKQCAVGKLLPCGDD---------------DGSTSQDSCTIM 186
BLAST of NO25G00630 vs. NCBI_GenBank
Match: XP_009830824.1 (hypothetical protein H257_07099 [Aphanomyces astaci] >ETV79888.1 hypothetical protein H257_07099 [Aphanomyces astaci]) HSP 1 Score: 98.6 bits (244), Expect = 5.800e-17 Identity = 48/103 (46.60%), Postives = 57/103 (55.34%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKACAAEGRXXXXXXXXXXXXXXGSLVGSSCSIM 495 LCE++RHR+L SCWLVA G VYDVT + HPAG I RKAGG DC++D FHS AQ+ WK+ IG C + G SCSIM Sbjct: 103 LCEVKRHRSLTSCWLVANGIVYDVTNVIQQHPAGTKCILRKAGGVDCTQDLRFHSKDAQRCWKQCAIGKFLPCGDDN--------------GGDAAQGSCSIM 191
BLAST of NO25G00630 vs. NCBI_GenBank
Match: OQS06692.1 (hypothetical protein THRCLA_01269 [Thraustotheca clavata]) HSP 1 Score: 98.2 bits (243), Expect = 7.500e-17 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKACAAE 468 LCE++RHR+ SCWLVA G VYDVT ++ HPAG I RKAGG+DC++D +FHS A+ W K +IG ++ C + Sbjct: 103 LCEVKRHRSATSCWLVANGIVYDVTDIMNQHPAGTKCILRKAGGEDCTKDMKFHSKAARNCWSKCQIGKLQPCGED 178
BLAST of NO25G00630 vs. NCBI_GenBank
Match: OQR91315.1 (hypothetical protein ACHHYP_04793 [Achlya hypogyna]) HSP 1 Score: 97.1 bits (240), Expect = 1.700e-16 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKAC 465 LCE++RHR+ +SCWLVA G VYDVT ++ HPAG I RK+GG DC++D +FHS AQ W K +IG + C Sbjct: 111 LCEVKRHRSASSCWLVANGIVYDVTDVMAQHPAGTKCILRKSGGMDCAQDMKFHSKAAQSCWSKCKIGMLLPC 183
BLAST of NO25G00630 vs. NCBI_GenBank
Match: XP_008608302.1 (hypothetical protein SDRG_04405 [Saprolegnia diclina VS20] >EQC37975.1 hypothetical protein SDRG_04405 [Saprolegnia diclina VS20]) HSP 1 Score: 96.7 bits (239), Expect = 2.200e-16 Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKAC 465 LCE+++HR+ ASCWLVA G VYDVT ++ HPAG I RK+GG DC++D +FHS AQ W K +IG ++ C Sbjct: 114 LCEVKQHRSAASCWLVANGIVYDVTDVMAQHPAGIKCILRKSGGVDCAQDMKFHSKAAQSCWSKCKIGMLQPC 186
BLAST of NO25G00630 vs. NCBI_GenBank
Match: XP_002179722.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48708.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 94.0 bits (232), Expect = 1.400e-15 Identity = 59/177 (33.33%), Postives = 73/177 (41.24%), Query Frame = 0 Query: 296 VESSVVCDACPSCDDVCTLQDCRGCQEKRERLLARGLMVVVEAWGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYYSLCEIRRHRTLASCWLVAKGQVYDVTPYL--SSHPAGAIAIARKAGG-QDCSEDFEFHSGKAQKMWKKLRIGSVKACAAEGR 470 V+ CDACP C DVC +C C EK L GR YY++C++RRH S WLVA +YD T Y+ SHP GA +I RKAGG QDC +D +FHS + WKK IG ++ C EGR Sbjct: 37 VDYKTTCDACPCCRDVCDNPECLSCDEKTRYL------PCPPCQGREQG--------------------------------------------YYTMCQVRRHNNKDSAWLVAGDTIYDATSYMQQDSHPGGAASILRKAGGVQDCLQDLQFHSKAGVRTWKKYEIGKLRPC--EGR 161
BLAST of NO25G00630 vs. NCBI_GenBank
Match: GAY06191.1 (Hypothetical protein PINS_014001 [Pythium insidiosum]) HSP 1 Score: 93.6 bits (231), Expect = 1.900e-15 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKACAAEGRXXXXXXXXXXXXXXGSLVGSSCSIM 495 LCE+R+H T SCWLVA VYDVT L+SHPAG +I RKAGG+DC++D +FHS A+K+ +K IG ++ C G+ V S+C+IM Sbjct: 185 LCEVRQHTTADSCWLVANNAVYDVTGVLASHPAGPRSILRKAGGKDCTQDMKFHSKTARKLLEKCFIGKLEPCGETN---------------GADVQSACTIM 272
BLAST of NO25G00630 vs. NCBI_GenBank
Match: XP_008915051.1 (hypothetical protein PPTG_18905 [Phytophthora parasitica INRA-310] >ETI31721.1 hypothetical protein F443_21350 [Phytophthora parasitica P1569] >ETM99673.1 hypothetical protein PPTG_18905 [Phytophthora parasitica INRA-310] >ETO60432.1 hypothetical protein F444_21373 [Phytophthora parasitica P1976]) HSP 1 Score: 92.0 bits (227), Expect = 5.400e-15 Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 0 Query: 392 LCEIRRHRTLASCWLVAKGQVYDVTPYLSSHPAGAIAIARKAGGQDCSEDFEFHSGKAQKMWKKLRIGSVKAC 465 +CE++ HR+L SCWLV GQVYDVT +++HP G +I RKAGG DC+ D +FH+ A+KM +K IG ++ C Sbjct: 226 MCEVKLHRSLESCWLVCSGQVYDVTGLVTAHPGGVRSILRKAGGPDCARDMKFHTKNARKMMEKCFIGKLQQC 298 The following BLAST results are available for this feature:
BLAST of NO25G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00630 ID=NO25G00630|Name=NO25G00630|organism=Nannochloropsis oceanica|type=gene|length=1485bpback to top protein sequence of NO25G00630.1 >NO25G00630.1-protein ID=NO25G00630.1-protein|Name=NO25G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bpback to top Synonyms
Publications
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