NO25G00550, NO25G00550 (gene) Nannochloropsis oceanica

Overview
NameNO25G00550
Unique NameNO25G00550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2487
Alignment locationchr25:157110..159596 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:157110..159596 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00550.1NO25G00550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00550.1NO25G00550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00550 ID=NO25G00550|Name=NO25G00550|organism=Nannochloropsis oceanica|type=gene|length=2487bp
ATGTCCCCCGAAGGTTACCGCGGCAATCAAACTCTGTTTGCGGACAACCA
ATACCGCTTCCCCTTCCTTCACTTCTTCCGCCCCGGCCAGGACGTCTCCG
TGGGCGTGACGGACGTGGGGGAGGTGACCTACGGCACAGGGCGCATAGCA
GGGATGGCTGACGTGCCACCGGCGCAGAAAGCAGAGGTGGAGGAGGCTTT
GACGGAGATAAGGGAGGTCCAGATGGATCGAGTTAATTTGAAGGTATTTG
TGGAGCTGCTCGGGGAGCAAGTAAAATTCCCTAGCCTGACTAGAGACTTT
TTTGTCCGGATGCATGATGGGCAGATTGCGCGAATGAGAGAAGGAAAGAC
CGGGTGGGCTATTTACTCCGTGGACGGGGTCTCGGGGCCGTTGCCTACCT
TGTACATTGAATGGAGTGAGATGAAGAAGAGCAGTGGCAGAGGGAGGCGG
AAAGTGACGGGGGAGGCAGCGGCTACGGCTGCCGTGACCTCCAACCCCAT
TCCCAGCAACAACACCGACCCCACAACAACGACCACCACCACCAACGACA
ACGACGATGACAACGACAAGAAGAAGAATAAGCGTAGCAAGAAAAAGAGT
AAGGAAGGGAAGGAGGGAGGTCGAGAGGAGGAGTTTGATCACGAGGTGTT
CGATTACGAATCGGAGGCAGCTCGGCTCTGGTTTACCCGCACCCTTAACG
AGTACGGCTGTCTGTCCTTTCTCAACATCATGTTTGCCGGCGGTCGACGC
AAGGAAGACTTCCTTTCTCTCATCCGCAAGGACGCCGTAGCCGTGCTGAA
GAGCAGGAGAAAGAATGAAGGCTTCAAGGTTTGGATTTTCGTCTTGCATG
ACAATGGGGAGAACATGCGGCAGGCGGATGCGTACGCCCAGCGGGTGCAC
GGTGCTGAGAGTTGGCACCAGTTTACGGACTGGCTGGTGGGCGGGAAGAC
GGAGGTTGTGCTGCGGGTGACCGAGCGACTGGATTGCGGGGTGGATGTGG
CGGTAGGGTGCCAGCGAGTGGGAGAGATGATGGTGGGCGGGCCCAGGGTG
GGCCACGGGGTCGTCCAGTACGGCTTGACGCTGGCCGTGGCCGTGAATGT
CTGCCACTTGGACTTGCTCCATTTGCCGGTAAGGATGGCGACCAAGGGTG
GGGATCCAGCGCATCGGGCGAACAGAAAGACCGCGGGGGCTAGGCCTTGG
TTCCGCGTCACGGCCGACTCGGTTACCTCCATCATTCGCTCCCTCCGCGA
TGATCTCTACCGCCAGATGTGCCCCTCTGCGCTCCCACCCTTCCCATCCT
TTGCGTCCTCCACCACTGCTACCGCTACCGTCTTCTCCCCCTCCTCCTCC
TCTTCCTCCTCCTCCTCCTCCTCCTCCCCTCCTTCATCCCTCTCTCCTGT
TTATCTCGACCGCCTGAACCGCCTCCGTCGCTTAGAGGCAGACATCTCCC
AACTTTCCTCGTCTCTTTgtacgattaagcctctatggccaagcagggag
tcaacagcggatacagcaagaccttgacacgacaaggatgggtgagagtg
atagaagaagacttcgcacagctctcttcagcactcgcgttagccatgga
cggaagaagcgcggacgaggttgtggcgatgctgcagcaattatttagat
aggcgattgaggggagaggagaggggggaagggaggcgaggagaggaggg
agggggaggggacgggggagaggaggacgaggaaagggccgaagaggacg
gaaactgcaggccctggagggggcgaaggagcaggagaaagatgacgtgg
gggaagagggagaagtaatggatgatcaggagtttgggtcaaccctaacc
ctaaccctaacccgaggagaaagGCGACGAGGAGGAGGATGTCTCGTCAT
CAGCGCTGGCCGTAGGGTCGGCCAACTTCGTGGGAGGAGGGAGAGGGGAA
GCAGCAGCGGCAGTAGCAGAAGCAGCAGCAGCAGCAACAGCAGGAGTCTC
TACGTCTGAGGATAAAGAAGTGACTACGTCTTCTTTGATTCCCGCTTCTT
CCCTTTTTCCCTCTCCAGTTTTTCCTCTTTCCTTTTCCTCCCGGCCCGCC
GCTAGCACGATTGACGCGACTGGCTCTGGCAAAAAGCGGGAACGGGAGGA
GGAAGGAAAAAAGGACGGGCAGGACGATGAGGAGGCGATGGAGGTTGAAG
GGAAGGCGGAGCAGCCGCTTACAAAGGTGGCAAAGGCGGGCATGGAAGCC
AAGGACCGGGGAGCCTCGACCTCCCCATTCTCCCCCTCCTCTCCGTCGAC
CCCCCTCTCTACTGCCTTATCGCTGTTCGAAGTGTTTTCATCAGCAGTAT
CAGGCGTAGGGGCAGCAATTCCGGCGGGAGGAGGGCATGATAGGAAGGAG
CACAGACAGCAGCTGCAGCAGCCCGAGACGGCTGACAAGAGCACCTCGCC
CAATTCGTTTGAAATGATGGAGGAAGAGGCGGGGTGA
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protein sequence of NO25G00550.1

>NO25G00550.1-protein ID=NO25G00550.1-protein|Name=NO25G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=694bp
MSPEGYRGNQTLFADNQYRFPFLHFFRPGQDVSVGVTDVGEVTYGTGRIA
GMADVPPAQKAEVEEALTEIREVQMDRVNLKVFVELLGEQVKFPSLTRDF
FVRMHDGQIARMREGKTGWAIYSVDGVSGPLPTLYIEWSEMKKSSGRGRR
KVTGEAAATAAVTSNPIPSNNTDPTTTTTTTNDNDDDNDKKKNKRSKKKS
KEGKEGGREEEFDHEVFDYESEAARLWFTRTLNEYGCLSFLNIMFAGGRR
KEDFLSLIRKDAVAVLKSRRKNEGFKVWIFVLHDNGENMRQADAYAQRVH
GAESWHQFTDWLVGGKTEVVLRVTERLDCGVDVAVGCQRVGEMMVGGPRV
GHGVVQYGLTLAVAVNVCHLDLLHLPVRMATKGGDPAHRANRKTAGARPW
FRVTADSVTSIIRSLRDDLYRQMCPSALPPFPSFASSTTATATVFSPSSS
SSSSSSSSSPPSSLSPVYLDRLNRLRRLEADISQLSSSLCDEEEDVSSSA
LAVGSANFVGGGRGEAAAAVAEAAAAATAGVSTSEDKEVTTSSLIPASSL
FPSPVFPLSFSSRPAASTIDATGSGKKREREEEGKKDGQDDEEAMEVEGK
AEQPLTKVAKAGMEAKDRGASTSPFSPSSPSTPLSTALSLFEVFSSAVSG
VGAAIPAGGGHDRKEHRQQLQQPETADKSTSPNSFEMMEEEAG*
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Synonyms
Publications