NO25G00520, NO25G00520 (gene) Nannochloropsis oceanica

Overview
NameNO25G00520
Unique NameNO25G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4796
Alignment locationchr25:149393..154188 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:149393..154188 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004380NSK004380Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00520.1NO25G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00520.1NO25G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00520 ID=NO25G00520|Name=NO25G00520|organism=Nannochloropsis oceanica|type=gene|length=4796bp
CCAACATACAAAAAGTTGGCTTCCCTCGGCCCTTTATCCAATTGCCTTCC
GGCCTGCCGTAGACATCGCCGCCTTGATCTACGTCATCCACTACAAGGCC
TTTCATCATGATGAACTAGTGAGCGTGTTGTCGTGGTCGGTTGCTCCAAT
TTCGGTGTCGGAAAGACCTTTTTTGCGGGTTCCCCTCCTGCTGGCTTGCC
GTTGTCAAGCGAGGGAACGGGCGCAGCCCTGTCAAAAGAACACGCGCCGC
GCCAACTCCGTCTTTGCATGTCAAGTCAATTGCAACCTTGCCGTTCGCCT
CCTCTAGCAAAGTGTTCTGAGTGAGCATGCACCCTGATTGGACAGCGCTG
GCAACAGCACTGGGTCAAACGGGGCCAACACATCATCCCTCTCCCCTCCG
AGACACACGAGGAAAGCACAACCCTCACGCTCCTCTCCTCTTCTTCCCTT
CCATACGCACAGGGGGCCGACGTGCCTCCCCTTTTCTATTCAGGAAGACA
CCCCTTCGCAGCAGCAGCACCCAACATCCACGTACGGGCGGGCCCTCTAC
ACATTCGCTGTCTGTTCCACGCCCTGCGGCATCTTCGTCCTGTCACCTTT
CACGCGTCACTTCATCACCATCTTAACACACCACCACTCCAACGATTTGA
GGGAGTCCACCCTTACGCACCACAACCCAAGCAGCAAAACCGCTGATCAC
CCAAAATGGGAAACGCGAACTCGCCCCAGCGAGCGGGCTTCGCCACAGAC
CCTTTGATGTTCCCCGCACCCCCGAGCGGCGACATCATCTCCCCCACACA
ACGCTCCTCGGCCTCTACCCGTCGTCTTGATGAAGGAAGGCATGATGCAG
CGTCGCCTTCTTCAGACAGgtacgatgcgcacagtcatgcggagagggcg
gcaaagagtgcatattgtcttacctatggattcttaccctaccctcctcc
cttctcctcctattcttctctctcatccttctatagGTTTCGATCGGACA
TTGGCGCTACAGCACAGAAAGCAGGAGACGGGGCCGGGTCGCCGGTATCA
CATCCTTCTTTGTCCTCCCCCTCTTCGAGACAAAACACCCACCCCCACCA
CCAAGCGCGATCCTCACCACTGCCGCACCCGCACCACCAGCACCAGCACC
AATCCCACTCTCAGAGTCGTTCTCAAGATCAAAATGGCTGTGTGATCCTG
CCGCCTGAGGACCTGAGCATGTCGGAATGGTTGGACGGCACGGCTCGACA
CGGGAGCGCGGAGCATCAAACAGGTGCTCGAGGGGGGGGCGCCAGCACCA
TCGCCGACCTTGTAGCCGCCGCCAACATGCAACAAGGGGCACCAGCCGCG
GTGGCAACAGCAGCAGTAGCAGCAGCAAGGGCAGCGAAGGTGACAGCGGT
ATCGCGACCGTCGGCCTCGTTTGTCATTCTCCCCACCCTGCCCGCTCCAC
CTGCTCCTACAAGTACCATCACAGCTTCTCCTTCCTCTTCCATCTCCTCG
CACACGCATGCTCACGCTGCTGGAGCAGCAATAGGAGGATCAATGTATTC
CCAACACCATGCAGCAGCAGAGTTGGAGAGCTTGCCCATGCATCCCCTCG
ATTGGGGCGCGCTTAACTTGCCCGGCTTAGCGGTCAACACGGGAGGAAGC
AACGGCCCCAGTCCTCTTCGAAGCCTTGCTGCTGTTGCTGCTGGAGGTGG
TGGCGGAGGACGAGGACGACGAGGAGAAGAAGAAGAAGAAGGAGAAGAAG
GAGAAGGAAGAGAAGGACGAGAAGGAGGAAAAGGACGAGAGGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGAGGGACGGGAGCATGATTCATTGGGTTTGATGCACCGTGGGA
TGGGGCAAGGGGAGCCTGGTGCGGTAGCTGCCCTTCTTTCCATGTCTCCT
TCTGGATCGCGCTCACAAGCAAGGATATTGGGGAGAGGAGAGGGCACGGA
AGAGCTGCAGCATCTGCACCATCACCATCTTCATTATCAGCAGCACCAGC
ACCAGCAACAGCAACAGCACACGCAAGCGCAACCGCTCACAGGGTTAAGT
CCGAACACGGTGACTGGTGGAGGAGGGAAGGGGGGCAGGGATGGGTCAGG
AAGACAGCAAGTCTGGCCGTCGGGAGTGGAGATGTTGGATTATGCGGTGG
CGCTTGGGTACGGGTCGGGAGGAGGACACGGGGATGAAGGGATTATCGAT
TACGACGAGGACGAGGACGAGGACTACGTGCATGAAGAGGTAGAGGATGA
TAGCGAGGACGAGGACGACGACGATGAGGACGACGAGGAGGGAGAAGATT
TTGCCCGGATTTGTGAGGAGTTTGACACGATGCCTAGTCCAGGGAAGTCA
GCTGCTGTTCCCTCTTCCTCCTCCTCGCGGCGGCGTCGTCGGCAGGGAGG
GGAGGAAGAGAGTGGGCACGCTCACATGCACTTGCCGCTGGACCCATTGC
TGCCCTTGGGGAGCACAGGTGTGGTACCTCCGTTGGGTTCTATAATGGTG
TTTGAAGACCCTATGATCAGCCATAGTGGCGGCAATGGAGGTGGGAGAAG
AGGAGGTGGTCGTGGACGAAGCAAGGCAGGAGGGGCACAAGATGGAGGAG
GGGGAGGAGGAGAAGGAGGGACCGCCGTCAAAATCACTACCAGCCGCAGC
GGGCGAAGAACAGGTCGGGTGCCCATCGTAGCAGCCGAGGACGCGACCCC
TACTCCTTCTCGTCGTCGCACCACGTCCGTGCAGCTCGCGGGGCTCATGT
CCGTCCCTCGTGAAAACCCCTTGAAGCACCTGGCCCTTTCTCCTTCAACC
ATCTCCTTGGAAGATGTCGCCTTCACCGGCACTTTCGGCCCAGCCCTCCG
ACAGGAACTCAACCACTATCTCGCCTACGGGCGCAACGTCTCGGCGCAAT
ATTGGGCCGACACCCTCCGCAAAGAAATGGCCCGCGCCATATGGATGATG
CAAGCCTTGGGGGCCCCTCGCCAATCCCTCGACACGGCAGAGGAGCTGAC
TCAGATGCTTCGCACCAGCCGGGCCGTCGTCACGCAGCTGTACCGGATGG
GCAAAGATGAGACGTTCCCCGGCTCTCCCCCCTGCTCGGAGGCCTCCATT
CTGCGACGACGGGCGGCGCTTAATATTTTGCTGGAGGCCGTCGGGCTCAA
GGCGGAGAAGATGCCCCCGCGTCGAAAGAGCACGGGAGGGGAGGGTGGTG
GTTTGGGAAGAGGAGGGACTAACCATGAGAATAGCAGCAATGAAATTGTT
GCTGGACAGGGACAGGCGCATGTCTACGACGGGGATGAAGCACTGAAGGA
GAATGTAGTGATGCGCTCGGGTTGGGGGCGAACTGCGCGCCGACAGTCTT
TTGGGGGGCATTACCTTGATGTGGACGATCCTGATTGCCGTTCTGCTGGT
GGTATGTATTGCCCCAGTAGCGAAGGTCGGACGAAAGCCGGCGGGGGGGG
GGTGGAGGATGGTATTGGTTACAGTGCCAGCAGCAAGAAGCCCAATTCCG
CCTACTCCTCCAAACTTAAGCGCCGGAATTCCCAAAAAGGCGGTAAGATT
CACAAGACGCCTTTAGATCGTGTGTTGGAACGTCGGCTCGAAGCCTTCCT
GATTCAGCAGCACAACCTCACCCTGGCCTCGGCGGCAAACTACCTGAGTC
ACATCCGCACCATGCTGCGGGAGGCATTGGAAGCCCTGGGGGAGGGACGA
CGAGGGCTGGATGGACCGCAAGCTGTCGATATTTTGCATAGCAGTTCCTT
GGCCGGGAGTGACTACTCGGAGCATCGTCCGTCCTACTGGGCGGCCTTTC
TCCGCTTTCTCGAGCTGCACCACGGTCTCCGAGAAGTCGGCTGCGGGCAC
TCCACCAGCCGACATCCCAAGCTTCTCATCTCGTCCAAGAAATCTGCGGC
CAACAAGGCAGGCAAGGCGACCCCCGCAGAGAAAAATACCCCTTCTGTAG
TTCCCACTCCCTCTATCGTCATTCCCCTCACAACGGCGCCTGCTGAGATT
TCGTCATCTTCAGCTGCACCGCCTAAGGGTTCCCGGCTGCTGTCGTCGTC
ATCGAATAAAAAGCCGTTTTCCTCGGTTAAGCGTCCGCGGTTGTCTATGA
ATGAGCCTCTGGTGATGCTTCCGGACGGGAGCATGGAAGATGGAGGAGGG
GGGGGGGAGGGGATAAAGGCAAAGgtggaggaaagggaggcgaaggagaa
gggaatgatgctaagaaggcactatcctgcacatcgacaaggcggaagaa
gGCGGTGGCCGTCAAGAGGGAGGTGCACGAGGAGGAAGAGGAAGAGGAGG
GAGAGGAAGCAATGAATATGGTGGTTGGCAGTGGACGTTACCAGTTGGTG
GGCAAGGGCATCAAGGCGGCCAAGAGGGTTGCAGATAATCCTGATGGAGC
ATTTAGCAGTAGCAGTAGCAGCACCAGCTTCAGTGGTAAAGCATGTGGGG
AGCGAAAGATTGTGACCTTGGGTAGAAGCAGTGGGATGATGCCTAGTATC
TCCACGGCGAAAGCTACCACCTCCGCTGCTGCTGCTGGTGCCACAGGCGC
TGAGTCAACGGCAGCGGTGGCAGCAGCAGATGCGGCCCCGATGCGTGTGG
CTCAACCGAGCTCGAACACGATCCGCCTAAGCATCAATGACCCTCTTCGG
CCTTCCGTCCACTTTGTGACACCCTCCCCGCAGACGGCTCCGAACAAGGG
CGGGGAAGGGAAGACTGCGCGAAACCGCTTGCTGATCAGTTTGTAG
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protein sequence of NO25G00520.1

>NO25G00520.1-protein ID=NO25G00520.1-protein|Name=NO25G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1299bp
MGNANSPQRAGFATDPLMFPAPPSGDIISPTQRSSASTRRLDEGRHDAAS
PSSDRFRSDIGATAQKAGDGAGSPVSHPSLSSPSSRQNTHPHHQARSSPL
PHPHHQHQHQSHSQSRSQDQNGCVILPPEDLSMSEWLDGTARHGSAEHQT
GARGGGASTIADLVAAANMQQGAPAAVATAAVAAARAAKVTAVSRPSASF
VILPTLPAPPAPTSTITASPSSSISSHTHAHAAGAAIGGSMYSQHHAAAE
LESLPMHPLDWGALNLPGLAVNTGGSNGPSPLRSLAAVAAGGGGGGRGRR
GEEEEEGEEGEGREGREGGKGREGGGGGGGGGGGGGGGGGGGGGGEGREH
DSLGLMHRGMGQGEPGAVAALLSMSPSGSRSQARILGRGEGTEELQHLHH
HHLHYQQHQHQQQQQHTQAQPLTGLSPNTVTGGGGKGGRDGSGRQQVWPS
GVEMLDYAVALGYGSGGGHGDEGIIDYDEDEDEDYVHEEVEDDSEDEDDD
DEDDEEGEDFARICEEFDTMPSPGKSAAVPSSSSSRRRRRQGGEEESGHA
HMHLPLDPLLPLGSTGVVPPLGSIMVFEDPMISHSGGNGGGRRGGGRGRS
KAGGAQDGGGGGGEGGTAVKITTSRSGRRTGRVPIVAAEDATPTPSRRRT
TSVQLAGLMSVPRENPLKHLALSPSTISLEDVAFTGTFGPALRQELNHYL
AYGRNVSAQYWADTLRKEMARAIWMMQALGAPRQSLDTAEELTQMLRTSR
AVVTQLYRMGKDETFPGSPPCSEASILRRRAALNILLEAVGLKAEKMPPR
RKSTGGEGGGLGRGGTNHENSSNEIVAGQGQAHVYDGDEALKENVVMRSG
WGRTARRQSFGGHYLDVDDPDCRSAGGMYCPSSEGRTKAGGGGVEDGIGY
SASSKKPNSAYSSKLKRRNSQKGGKIHKTPLDRVLERRLEAFLIQQHNLT
LASAANYLSHIRTMLREALEALGEGRRGLDGPQAVDILHSSSLAGSDYSE
HRPSYWAAFLRFLELHHGLREVGCGHSTSRHPKLLISSKKSAANKAGKAT
PAEKNTPSVVPTPSIVIPLTTAPAEISSSSAAPPKGSRLLSSSSNKKPFS
SVKRPRLSMNEPLVMLPDGSMEDGGGGGEGIKAKAVAVKREVHEEEEEEE
GEEAMNMVVGSGRYQLVGKGIKAAKRVADNPDGAFSSSSSSTSFSGKACG
ERKIVTLGRSSGMMPSISTAKATTSAAAAGATGAESTAAVAAADAAPMRV
AQPSSNTIRLSINDPLRPSVHFVTPSPQTAPNKGGEGKTARNRLLISL*
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Synonyms
Publications