NO25G00460, NO25G00460 (gene) Nannochloropsis oceanica

Overview
NameNO25G00460
Unique NameNO25G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1451
Alignment locationchr25:128417..129867 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:128417..129867 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00460.1NO25G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00460.1NO25G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00460 ID=NO25G00460|Name=NO25G00460|organism=Nannochloropsis oceanica|type=gene|length=1451bp
ATGTCCTCCTCCAGAGAGGCGGCGCTGGTGCAGCAGGTAGCCTACCTCAG
GAAGCAGGTGCAGGCACAAGAGGAGGACCTGGCCGAGGAGAAGAAGCTGA
GGCAGCACTACCAGCGTCAAGCAGAGGACATCATCAGGTCTACCGCCAGG
CAGATGGAACCCCTGCTGGTCCCGTTGCTGGCACGATTTGAGGAGTTgta
tgacaaggcacccccgagaagcccgtgggcttgacatttggcagggctca
ggcgggtgccttgacgggggccttgtagcacttcttaagAATCGACGGGG
AAGCGAATGTCGTAGGTCCCTTGGAGAGCGCGGAAGAGgtgagttgcaca
ttcccttctgctatctttaggaaccctcttctatctgtctcgagtgcgct
gcaccggtctcaactccctttccactgacaaatgttccacgaaaccttac
ttgctttctttctaaatacctttcctccgccactctcttcctttcttctg
tcctttcccacaccagTTCGACGCATTGTGTGGAGGAGACAAGGCTCAGG
CGTTCGGCAAGGAGTTGGCTACCCTCATAGAGTTTTGGCCCCATGTGgta
cagcagcatcagcagcatcagcagcatcagcagcatcagcagcatcagca
gcatcagcacaaggagaaaggagaacaagaacgcaggctgcgagagaagc
attgaccattgctgccgcggcagcagcagcgacatcatgagagagaggga
caagaacgtcaaacccgacagcagCAACAGCAGCAGCAAAAGGAGGAGGA
GGAAGACGACGAGGATGAGGAGGATGAACTAAGACTTCATGAGGTGGAGG
AATTAGAACAATGGCAGCAGGTTGGAAATTTTCGCCTGCAGAAGCAGCAG
CCAGAATGGGAATTGAAACAGCGAAATGGAGAACATAGGAAAGGACGAGA
AAGCGTGGCTGGAGCATTGCGATCGGTGGAGACTGGGAGTCGGCGGCCGC
CAGGAGCAGAAACCAGCAGCAGTAACAAGAGCAAGAGCAAGAGGGACAGA
CATGGGGCCAAGGGCGGATATAATGTGGTCGAAGAGATGGCCGCGACAAg
taagggaacggcagagaggctgcgcaaaagatgtagagaaggaagcgtgc
cgacggtgtcgttgtcttcagcttccgactcgcccccctccttttcttct
tatcctcctccccgtccccgaccacgtcttcgccttcctcctcttcttgc
gccttattcttctcctcctcgtctccttactcctcttcctcttcctcagC
AGGCCTTCTCGTGGAGCAGGAGCCACAGCGGCGACAAGAAGAGCAACAGC
GGCCGCAACAGCAACAAGTGCAACTGCAACAAGACCCCCCAGCCTCTGTC
TCCTCTCTAACCTGTATTACAGCCTCGGTCAGCAGCGGAAATGGAGGTTG
A
back to top

protein sequence of NO25G00460.1

>NO25G00460.1-protein ID=NO25G00460.1-protein|Name=NO25G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=268bp
MSSSREAALVQQVAYLRKQVQAQEEDLAEEKKLRQHYQRQAEDIIRSTAR
QMEPLLVPLLARFEELIDGEANVVGPLESAEEFDALCGGDKAQAFGKELA
TLIEFWPHVQQQQQKEEEEDDEDEEDELRLHEVEELEQWQQVGNFRLQKQ
QPEWELKQRNGEHRKGRESVAGALRSVETGSRRPPGAETSSSNKSKSKRD
RHGAKGGYNVVEEMAATTGLLVEQEPQRRQEEQQRPQQQQVQLQQDPPAS
VSSLTCITASVSSGNGG*
back to top
Synonyms
Publications