NO25G00290, NO25G00290 (gene) Nannochloropsis oceanica

Overview
NameNO25G00290
Unique NameNO25G00290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3565
Alignment locationchr25:88089..91653 -

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Properties
Property NameValue
DescriptionDNA polymerase sigma subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:88089..91653 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO:0016779nucleotidyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR002934Nucleotidyltransferase
IPR002058PAP_assoc
Homology
BLAST of NO25G00290 vs. NCBI_GenBank
Match: GAQ89300.1 (DNA polymerase sigma subunit [Klebsormidium nitens])

HSP 1 Score: 235.7 bits (600), Expect = 3.300e-58
Identity = 142/345 (41.16%), Postives = 198/345 (57.39%), Query Frame = 0
Query:  110 PLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKLRFL--NLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQ-HAQKEAEEASGSERTL--NLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSP-PAGKPISLLAVVIRPDQVLSGR---PMPKRHIFQTRVFTPRKPYRPQVSSND 446
            PLLRLH E++DFCD LA T  E   R+   +   + + ++WPD    VFGS AT +FLP SD+DMVVL      V  V N L  L+    +      ++VIAKARVPIIK   +   +Q DISF  ++G  +A+++ + M+ LPPLRPL LV K FL QRELNE +TGG GS+ L +ML+A+LQ H  +   E+ G  + L  NLG L +     YG  LN  +VG+S    G  F K E G F++DRP++L+V +P D   D+GKNSYN+  ++ A   A    HN+L +   AG+   LL  ++R D++L  R   P    H  +  V TP   Y   + + +
Sbjct:  148 PLLRLHQEIIDFCDFLAATDDERALREAAVERVKDVILSIWPDCTPTVFGSYATGLFLPTSDMDMVVL---NSGVDNVPNALRALSLQLSKRRIAKQIQVIAKARVPIIKFVEVESKIQFDISFDVENGPAAAKFIRQSMKTLPPLRPLCLVVKIFLQQRELNEVYTGGIGSYALIVMLMAHLQLHPSRRGYESGGPAQPLDSNLGILLIDFFELYGKMLNVRDVGVSCKDGGAFFNKREAGTFNHDRPFLLSVRDPQDENNDIGKNSYNVQKVRSAFMHA----HNLLTTEGEAGQ--GLLERIVRMDKILLKRKVAPPSPGHTPEAGVSTPHGAYEADLDTTE 483          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: XP_024159458.1 (non-canonical poly(A) RNA polymerase PAPD5 [Rosa chinensis] >PRQ31304.1 putative polynucleotide adenylyltransferase [Rosa chinensis])

HSP 1 Score: 232.3 bits (591), Expect = 3.600e-57
Identity = 134/311 (43.09%), Postives = 185/311 (59.49%), Query Frame = 0
Query:  110 PLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGKPISLLAVVIRPDQVLSGR 419
            P+L+LH E+LDFC+ L+PT  E EAR+   +  S  +K +WP   V+VFGS  T ++LP SDID+V++    +P  Q    L+ L+ A  Q      ++VIAKARVPIIK   +   +  DISF  DSG K+A ++ + +   PPLRPL L+ K FL QRELNE ++GG GS+ L  MLIA LQ  ++   +AS  +   NLG L +    FYG +LN  +VG+S  G G  F K  +G  +  RP+++A+E+P     DVGKNS+N   +K A A AYT L N       G   S+L  +IRPD  L+ R
Sbjct:  107 PMLQLHKEILDFCEFLSPTPQEEEARRTAVERVSEVIKYIWPRCGVEVFGSFKTGLYLPASDIDVVIM-RSGIPTPQ--QGLYALSRALSQMGLAKRIQVIAKARVPIIKFEEKTSGIAFDISFDIDSGPKAAEFIKDAISKWPPLRPLCLILKIFLQQRELNEVYSGGLGSYALLAMLIAMLQSLRE--SQASPEQ---NLGVLLVNFFDFYGRKLNTSDVGVSCKGTGTFFSKNSKGFTNKGRPFLIAIEDPQAPENDVGKNSFNYFQIKSAFAMAYTTLTNPKNIMSLGPNRSILGTIIRPDATLAER 409          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: XP_011461822.1 (PREDICTED: LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5 [Fragaria vesca subsp. vesca])

HSP 1 Score: 231.1 bits (588), Expect = 8.000e-57
Identity = 132/311 (42.44%), Postives = 185/311 (59.49%), Query Frame = 0
Query:  110 PLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGKPISLLAVVIRPDQVLSGR 419
            P+L+LH E+LDFC  L+PT  E EAR+   +  S  +K +WP   V++FGS  T ++LP SDID+V++    +P  Q    L+ L+ A  Q      ++VIAKARVPIIK   +   +  DISF  DSG K+A ++ + +   PPLRPL L+ K FL QRELNE ++GG GS+ L  MLIA LQ  ++   +AS  +   NLG L +    FYG +LN  +VG+S  G G  F K  +G  +  RP+++A+E+P     DVGKNS+N   ++ A A AYT L N       G   S+L  +IRPD +L+ R
Sbjct:  108 PMLQLHKEILDFCQFLSPTPQEEEARRTAVERVSEVIKYIWPRCGVEIFGSFKTGLYLPASDIDVVIM-RSGIPTPQ--QGLYALSRALSQMGLAKRIQVIAKARVPIIKFVEKTSGIAFDISFDMDSGPKAAEFIKDAISKWPPLRPLCLILKIFLQQRELNEVYSGGLGSYALLAMLIAMLQSLRE--SQASPEQ---NLGVLLVNFFDFYGRKLNTSDVGVSCHGTGTFFSKNSKGFTNKGRPFLIAIEDPQAPENDVGKNSFNYFQIRSAFAMAYTTLTNPKNIMSLGPNRSILGTIIRPDAILAER 410          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: XP_020704687.1 (non-canonical poly(A) RNA polymerase PAPD5 isoform X2 [Dendrobium catenatum] >PKU68560.1 DNA polymerase sigma subunit [Dendrobium catenatum])

HSP 1 Score: 230.7 bits (587), Expect = 1.000e-56
Identity = 126/313 (40.26%), Postives = 186/313 (59.42%), Query Frame = 0
Query:  110 PLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTL--NLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGKPISLLAVVIRPDQVLSGR 419
            P+L+LH E+LDF   ++PT  E   R+         VK +WP   V+VFGS  T ++LP SDID+V+L   +  V   +  L+ L+ A  Q+     M+VI+KARVPI+K   +   +  D+SF  D G K+A ++ + +E +PPLR L L+ K FL QRELNE ++GG GS+ L  MLIA+LQ  Q+ +++  G ++++  NLG L +    FYG +LN  +VG+S       F K +RG F+  RP++LA+E+P D   D+GKNSYN   ++ A A AY+ L +       G   S+L  +IRPD +L  R
Sbjct:  108 PMLQLHKEILDFSAFVSPTPEEKAKRETAVDRVFQVVKYIWPHCRVEVFGSFRTGLYLPTSDIDVVIL---DSKVKTPQTGLYALSRALSQKGIAKQMQVISKARVPIVKFVEKQSGIAFDMSFDVDGGPKAANFIKDAVEKIPPLRHLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAHLQ-IQRRSQDMQGVQKSMEQNLGILLVKFFEFYGRKLNTSDVGVSCKSSSTFFLKCDRGFFNTGRPYLLAIEDPQDPDNDIGKNSYNYYKVRSAFAVAYSSLTDARTIKSLGSQKSILGTIIRPDPLLLDR 416          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: CCA16045.1 (Poly(A) RNA polymerase putative [Albugo laibachii Nc14] >CCA26462.1 Poly(A) RNA polymerase putative [Albugo laibachii Nc14])

HSP 1 Score: 229.6 bits (584), Expect = 2.300e-56
Identity = 135/342 (39.47%), Postives = 191/342 (55.85%), Query Frame = 0
Query:  112 LRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKLRFLN--LQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVL--VSPPAGKPISLLAVVIRPDQVLSGRPMPKRHIFQTRVFTPRKPYRPQVSSNDKYHS 450
            L LH E+LDF   ++P   EL+AR+ +     N V  LWP   V+ FGS  T++FLP+SDID+V+           + +LF LA   +  + V+ +EVI KAR+PI+K    N  +QVDISF+  SGL +A  + + M   P  RPL+LV KYFLAQRELNETF GG GSFLLQLM++++LQ  +++        R  NLG L +     YG + NYE+VG+SV   G  F K  R    ++RP++L+VENP + T+DVGKNSY +  ++ +   A   L N +         P+ +L ++I P   L  R  P+R  +        K    Q     + HS
Sbjct:  124 LCLHEEILDFVHFISPHDEELQARENLIAQMKNLVSNLWPRAAVETFGSHETQMFLPQSDIDLVI-----FGAPTGKESLFVLAAELEARDMVSYLEVIDKARIPIVKFVDKNSAIQVDISFNISSGLATADLIKQYMRIFPSFRPLVLVLKYFLAQRELNETFQGGIGSFLLQLMVVSFLQQYRRQLGTLYDDFRYNNLGKLLVEFFTLYGREFNYEQVGISVQKGGFYFNKENRDWLDHNRPFLLSVENPNEPTMDVGKNSYEIRTVQRSFEYARQVLANEIHRRGQLDRGPVQMLHLII-PSSKLMNRTRPQRMGYNILYHNSEKTVALQKQYEARCHS 459          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: ETM43900.1 (hypothetical protein L914_10792, partial [Phytophthora parasitica])

HSP 1 Score: 228.8 bits (582), Expect = 4.000e-56
Identity = 124/314 (39.49%), Postives = 188/314 (59.87%), Query Frame = 0
Query:  114 LHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGK----PISLLAVVIRPDQVLSGRPMP 422
            LH+E++DF   ++PT+ EL +R ++ +     VK LWP+  V+ FGS  T++FLP+SDIDMV+       V + +  L++LA+  ++++ V+ +EVI KAR+PI+K+  +  N+ VD+SF+   GL +   +   M   P  RPL LV KYF+AQR LNET++GG GSFLLQ+M++++LQH  +         +  NLG L +G    YG   NY E+G+SV   G  F K +   +   RP+++A+ENP + +LD+GKNSY M  +K +   A   L N +     GK    P S+L  +I+PD  L  R  P
Sbjct:  133 LHDEIMDFVTFISPTEDELNSRAQLVQEMREIVKGLWPEATVETFGSHYTQMFLPQSDIDMVL-----FGVPEGKEPLYKLAQCLEEKDLVSYLEVIDKARIPIVKMVHKESNIHVDVSFNVAGGLATGDLVKHYMRVYPSFRPLTLVLKYFMAQRGLNETYSGGVGSFLLQMMVVSFLQHNGRALGAEHDDPKFNNLGQLLVGFFTLYGRDFNYTELGISVRNGGSYFLKEDHRWYDDGRPYLIAMENPNEPSLDIGKNSYEMRTVKRSFDYARQVLQNEIYR--HGKFNALPGSILGTIIQPDSNLVKRLPP 439          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: XP_009416524.1 (PREDICTED: non-canonical poly(A) RNA polymerase PAPD5 isoform X1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 228.8 bits (582), Expect = 4.000e-56
Identity = 130/337 (38.58%), Postives = 193/337 (57.27%), Query Frame = 0
Query:   85 TVTTGGGAGQKPITSTIKTDPTSLPPLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQ-HAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGKPISLLAVVIRPDQVLSGR 419
            +V  GG  G+    +  ++      P+L+LH E+LDFC  ++PT  E  +R    +   + VK +WP   V+VFGS  T ++LP SDID+V+L   E  V   +  L+ LA A  Q   V  M+VIAKARVPIIK   +   +  DISF  DSG ++A ++   ++ +PPLRPL +V K FL QRELNE ++GG GS+ L +MLI +LQ H + +           NLG L +G   F+G +LN  +VG+S     + F K ++G  + D+P++L++E+P     D+G+NSYN   ++ A A AY+ L +       G   S+L  +IRPD +L  R
Sbjct:   77 SVPRGGDGGRASELAWFRSGSRFKSPMLQLHKEILDFCHFISPTPDEQASRNAAVQCIFDIVKHIWPHCKVEVFGSFRTGLYLPTSDIDVVIL---ESEVKTPQIGLYALARALSQRGVVIKMQVIAKARVPIIKFVEKRSGIAFDISFDVDSGPRAADFIKAAVQKIPPLRPLCMVLKVFLHQRELNEVYSGGIGSYALLVMLIVFLQMHWRGQDSRDYRQPMEHNLGILLVGFFDFFGRKLNSWDVGISCNSKSLFFVKNDKGFMNLDKPYLLSIEDPQAPDNDIGRNSYNYYKVRSAFAMAYSTLTDAKAIMRLGPQRSILGTIIRPDPLLLDR 410          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: GAX95178.1 (putative GPI mannosyltransferase [Pythium insidiosum])

HSP 1 Score: 228.8 bits (582), Expect = 4.000e-56
Identity = 134/326 (41.10%), Postives = 185/326 (56.75%), Query Frame = 0
Query:  114 LHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGKPI--SLLAVVIRPDQVLSGRPMPKRHIFQTRVFTPRK 436
            LH E+LDF   ++PT  EL+ R+ +    +  V +LW    +  FGS  T++FLP SDID+V+       V      LF+LAE  +  + V+ +EVI KAR+PI+K   +  N+QVD+SF+  SGL +A  +   M   P  RPL LV KYFLAQR LNETF GG GSFLLQLM+I++LQH ++    A    +  NLG L LG L  YG   NY+++G SV   G  F K +R  +   RP++L+VENP +  LDVGKNSY +  +K +   A   L N +       P+  S+L  +I  D  L+ R  P+   F      P+K
Sbjct: 1527 LHEEILDFVRFMSPTPEELDRRRELVDEMTALVTSLWDGATMDTFGSHRTQLFLPNSDIDIVI-----FGVPNGTKPLFELAERLEALDMVSYLEVIDKARIPIVKFVHKESNIQVDVSFNVSSGLATADLVRHYMRVYPAFRPLTLVLKYFLAQRTLNETFAGGIGSFLLQLMVISFLQHHRRALGPAHDDPQHNNLGQLLLGFLTLYGRDWNYDDLGFSVRNGGTYFYKEDRDWYDAGRPFLLSVENPNEPELDVGKNSYEIRTVKRSFEYARQVLLNEIHRRGQFHPLAGSILGTIIPADSHLTERVGPEVLGFDILYHDPKK 1847          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: XP_008907239.1 (hypothetical protein PPTG_13369 [Phytophthora parasitica INRA-310] >ETI43999.1 hypothetical protein F443_11241 [Phytophthora parasitica P1569] >ETN07482.1 hypothetical protein PPTG_13369 [Phytophthora parasitica INRA-310])

HSP 1 Score: 228.4 bits (581), Expect = 5.200e-56
Identity = 124/314 (39.49%), Postives = 188/314 (59.87%), Query Frame = 0
Query:  114 LHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGK----PISLLAVVIRPDQVLSGRPMP 422
            LH+E++DF   ++PT+ EL +R ++ +     VK LWP+  V+ FGS  T++FLP+SDIDMV+       V + +  L++LA+  ++++ V+ +EVI KAR+PI+K+  +  N+ VD+SF+   GL +   +   M   P  RPL LV KYF+AQR LNET++GG GSFLLQ+M++++LQH  +         +  NLG L +G    YG   NY E+G+SV   G  F K +   +   RP+++A+ENP + +LD+GKNSY M  +K +   A   L N +     GK    P S+L  +I+PD  L  R  P
Sbjct:  123 LHDEIMDFVTFISPTEDELNSRAQLVQEMLEIVKGLWPEATVETFGSHYTQMFLPQSDIDMVL-----FGVPEGKEPLYKLAQCLEEKDLVSYLEVIDKARIPIVKMVHKESNIHVDVSFNVAGGLATGDLVKHYMRVYPSFRPLTLVLKYFMAQRGLNETYSGGVGSFLLQMMVVSFLQHNGRALGAEHDDPKFNNLGQLLVGFFTLYGRDFNYTELGISVRNGGSYFLKEDHRWYDDGRPYLIAMENPNEPSLDIGKNSYEMRTVKRSFDYARQVLQNEIYR--HGKFNALPGSILGTIIQPDSNLVKRLPP 429          
BLAST of NO25G00290 vs. NCBI_GenBank
Match: ETK84022.1 (hypothetical protein L915_10955, partial [Phytophthora parasitica] >ETL37456.1 hypothetical protein L916_10852, partial [Phytophthora parasitica])

HSP 1 Score: 228.4 bits (581), Expect = 5.200e-56
Identity = 124/314 (39.49%), Postives = 188/314 (59.87%), Query Frame = 0
Query:  114 LHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALWPDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQEESVTGMEVIAKARVPIIKL--RFLNLQVDISFSSDSGLKSARYMLERMEALPPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEASGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSYDRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGK----PISLLAVVIRPDQVLSGRPMP 422
            LH+E++DF   ++PT+ EL +R ++ +     VK LWP+  V+ FGS  T++FLP+SDIDMV+       V + +  L++LA+  ++++ V+ +EVI KAR+PI+K+  +  N+ VD+SF+   GL +   +   M   P  RPL LV KYF+AQR LNET++GG GSFLLQ+M++++LQH  +         +  NLG L +G    YG   NY E+G+SV   G  F K +   +   RP+++A+ENP + +LD+GKNSY M  +K +   A   L N +     GK    P S+L  +I+PD  L  R  P
Sbjct:  133 LHDEIMDFVTFISPTEDELNSRAQLVQEMLEIVKGLWPEATVETFGSHYTQMFLPQSDIDMVL-----FGVPEGKEPLYKLAQCLEEKDLVSYLEVIDKARIPIVKMVHKESNIHVDVSFNVAGGLATGDLVKHYMRVYPSFRPLTLVLKYFMAQRGLNETYSGGVGSFLLQMMVVSFLQHNGRALGAEHDDPKFNNLGQLLVGFFTLYGRDFNYTELGISVRNGGSYFLKEDHRWYDDGRPYLIAMENPNEPSLDIGKNSYEMRTVKRSFDYARQVLQNEIYR--HGKFNALPGSILGTIIQPDSNLVKRLPP 439          
The following BLAST results are available for this feature:
BLAST of NO25G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAQ89300.13.300e-5841.16DNA polymerase sigma subunit [Klebsormidium nitens... [more]
XP_024159458.13.600e-5743.09non-canonical poly(A) RNA polymerase PAPD5 [Rosa c... [more]
XP_011461822.18.000e-5742.44PREDICTED: LOW QUALITY PROTEIN: non-canonical poly... [more]
XP_020704687.11.000e-5640.26non-canonical poly(A) RNA polymerase PAPD5 isoform... [more]
CCA16045.12.300e-5639.47Poly(A) RNA polymerase putative [Albugo laibachii ... [more]
ETM43900.14.000e-5639.49hypothetical protein L914_10792, partial [Phytopht... [more]
XP_009416524.14.000e-5638.58PREDICTED: non-canonical poly(A) RNA polymerase PA... [more]
GAX95178.14.000e-5641.10putative GPI mannosyltransferase [Pythium insidios... [more]
XP_008907239.15.200e-5639.49hypothetical protein PPTG_13369 [Phytophthora para... [more]
ETK84022.15.200e-5639.49hypothetical protein L915_10955, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004395NSK004395Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00290.2NO25G00290.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G00290.1NO25G00290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602905gene_8512Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101393g1gene8885Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00290.2NO25G00290.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G00290.1NO25G00290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00290 ID=NO25G00290|Name=NO25G00290|organism=Nannochloropsis oceanica|type=gene|length=3565bp
AGCCCTTCCTCCCCAACCACACTACCCACGCATTGACCAACAGGCAATAT
ATTTTTTATTCGCTGACCGCTGTAGAAGTAGGAGTAGCACCCGTTCCTGC
GGCATCAAGCCAATATGACGGAGACCAAGGCCAACAAACAAGACAAGAAA
GAGGCGGGTGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGC
CTTCATCCAGTTTCACGACTCGGACGACGgtacgggcgtagggattgtca
tcgaggaggatggaggggagagtgagagaaggggggggatggttggagtt
taggtagtgatttgtttgtttctgctgtttgcatgctctgcggcagcctc
tcaacgcctccctccccctctccacacccaacaccacagACGACGATGGC
GTCGCCGCCGGTGCACAAGTAGGGGTTGATGAGGAGGACGGGGAGGGAGG
AGACAAGGTAGAAGAGGACGGGGGGTTGCTGCGACCATATACAGATGTGC
CGTGGCATCGGAAGGGTGGCCTGGTCACTGTCACCACAGGAGGCGGTGCA
GGACAGgtacggagaggggatgggggaaggatgagggatggcgggggatc
aagacaggaactgcttgtgctgacgttcatacgccgttaataataaggca
caaacctcctttctttccccttcctttgcttctcttcgcctcacgtcctc
cccctgtagAAACCCATCACCAGCACCATCAAGACGGACCCGACCTCCCT
CCCTCCCCTCCTGCGGCTGCACAATGAGCTCTTGGATTTTTGCGATTTGC
TGGCACCGACCAAGGCGGAGCTAGAGGCCCGGCAGAGGGTCACCAAGATT
GCCTCCAACACGgtagatatgcggggaaggaggaaccatgaatggagagg
agggggaggggggaagaatgacattgcgaccatgtctggtttggtgggtg
cactcaccacctctttccatcgatctttctctccctccctccctccctcc
ctcccgtccaacgcggcagGTGAAGGCGTTGTGGCCGGACTTCGACGTGC
AGGTGTTCGGGTCCGAAGCCACCAAGgtgaggccagcgagagggacaggg
agagagggagggagggagggaggaagggagggagggagtgacggagtgac
ggagtgagggaggaaggaaggaagggagggagggagggagagagggaggg
accagacggtgattttaaaaactgttgcgtttgtcttgattcgcccctcc
ttctgtctctccctccctccgccgctcatccttctccccttaccgcagGT
CTTCCTGCCCGAGAGCGACATCGACATGGTGGTGCTGCCACCCCAGGAGC
TGCCCGTGCACCAGGTCCGCAACAACCTCTTCCAGCTCGCCGAGgtgtgc
gggaaggcggggggggagggagggatggagggagggagggagggaaggag
ggaagagacagtggtgagaagagatgtgccccgaggtggaggcgtttgcc
tgatacgcaggaagcccgtcaccaacccccctccccttccccctcagGCC
TTCAAGCAGGAGGAGTCGGTGACGGGCATGGAGGTGATCGCCAAGGCCCG
CGTGCCCATCATCAAGCTCCGCTTCCTCAACCTGCAGgtaaactgggagc
agcgcgggggaggggaagggacggagggaaggagagagctcaggtggagg
ggtattacggcacacatcttcgagaccattattccatccttctccccccg
cgctcctccagGTGGACATCTCCTTCTCCTCCGACTCCGGGCTCAAGTCC
GCGCGCTACATGCTCGAGCGCATGGAGGCCCTGCCCCCCCTCCGGCCCCT
CATCCTCGTCTTCAAGTACTTCCTGgtcagcgggagggagggagggagag
agggagggagggcgggtcataagaacccgtcgatggtgaaaaggagagag
aaacgtgacaagtgggaaataatgggttcatacatgccgccctgtgaccg
tcccttcccccctccctcccttttgccctccctccccacccgtagGCCCA
GCGGGAGCTGAACGAGACTTTTACGGGCGGCTGCGGCTCCTTCCTCCTGC
AGCTCATGCTCATCGCCTACCTTCAGCACGCGCAGAAGGAGGCGGAGGAG
gtgaggatgggaatgagggagggaagggggaagggacgggaaggggagat
ttcgcctctctgtgtctgccaggcaaatccgtgggtccgtccgccaattc
aattaaatcgttaaaattattcattttttatatatgtataagtcgctcgc
tcgcctgtcttctttcttcctcccgaatacttctgtgcagtcgcgctcac
atccgtccaccttgccctccttccctcccttactcccctcctccctccag
GCTAGCGGCTCGGAACGCACTCTCAACCTGGGCTCCCTATTTTTGGGCGT
CCTTCGCTTCTACGGCCACCAGCTCAACTACGAGGAGGTGGGCCTGTCGG
TGCTGGGGGATGGCATCCTCTTCAGGAAGgtgaggcccagggggaggggg
gagagggggaggaggagggggggcttatgatgggatgggcagcaccatct
catatccccccatcccccctcctccccctctccctccagCTGGAGCGCGG
GATGTTCTCGTACGACCGCCCCTGGGTGCTGGCAGTGGAAAACCCGCTGG
ACTCGACGCTGGACGTGGGCAAGAACAGCTACAACATGCCCCTTCTCAAG
GAGGCCCTCGCGGAAGCCTACACCCGCCTGCACAACGTTCTGGTCTCTCC
GCCGGCAGgtgcgtcagggggaggagggaaggaggagggggggagggagg
ggcagtagagactcttggatttgatcgattcccggttggtgggtgctttc
ctcggacccaccttccctccctccctccctcctccctctctccctccctc
cctccttccttccctccagGCAAGCCCATCTCTCTCCTCGCCGTGGTCAT
TCGCCCCGATCAAGTGCTGTCCGGGCGGCCCATGCCCAAACGCCATATCT
TTCAAACCCGCGTCTTCACTCCGCGCAAGCCTTATCGACCTCAGGTAGAG
AGGGAGGGCGCGAGGGAGGGAGGGAAGGAGGGAAAGCCTCTGAGGGCTCG
TGGAATCGGGCGCCTTCGACTCCCGTCTCCTCTTTGAATTCCTATGTCCC
TGCCTCCCAACACAGGTCAGCAGCAATGACAAATACCACAGTAGCGCCAG
CGGTAGCTTCGGCGGCATCGGCGGCATCGGCGGGGGGGGAGGGGCTGGGG
GAGGGAGGGAGGTGCGCATGGTCTCCACCAACGACTATGGAGGAAGAGGA
AGGGGAGGAGGTAGTGGAGGAGGTGGGGGAGAAGAGGGAGGGAAAAAGCG
CGGTAGATGGTCGGGGGGGCGGAGAGAGGATCAGCCGGCGTCTGACTTCC
AAGCACGGGGGGACTACAACTTCAACAAGAGAGGCCGACGCTAAGCTTCA
TCAAAGCCCAAATCCAAAATCATGAAAAAGCAATGGGACGCTTAAAGCGA
AGGGAGAAAAAGAGA
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protein sequence of NO25G00290.2

>NO25G00290.2-protein ID=NO25G00290.2-protein|Name=NO25G00290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp
MTETKANKQDKKEAGDEEEEEEEEEEEEAFIQFHDSDDDDDGVAAGAQVG
VDEEDGEGGDKVEEDGGLLRPYTDVPWHRKGGLVTVTTGGGAGQKPITST
IKTDPTSLPPLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALW
PDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQ
EESVTGMEVIAKARVPIIKLRFLNLQVDISFSSDSGLKSARYMLERMEAL
PPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEA
SGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSY
DRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGK
PISLLAVVIRPDQVLSGRPMPKRHIFQTRVFTPRKPYRPQVEREGAREGG
KEGKPLRARGIGRLRLPSPL*
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protein sequence of NO25G00290.1

>NO25G00290.1-protein ID=NO25G00290.1-protein|Name=NO25G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MTETKANKQDKKEAGDEEEEEEEEEEEEAFIQFHDSDDDDDGVAAGAQVG
VDEEDGEGGDKVEEDGGLLRPYTDVPWHRKGGLVTVTTGGGAGQKPITST
IKTDPTSLPPLLRLHNELLDFCDLLAPTKAELEARQRVTKIASNTVKALW
PDFDVQVFGSEATKVFLPESDIDMVVLPPQELPVHQVRNNLFQLAEAFKQ
EESVTGMEVIAKARVPIIKLRFLNLQVDISFSSDSGLKSARYMLERMEAL
PPLRPLILVFKYFLAQRELNETFTGGCGSFLLQLMLIAYLQHAQKEAEEA
SGSERTLNLGSLFLGVLRFYGHQLNYEEVGLSVLGDGILFRKLERGMFSY
DRPWVLAVENPLDSTLDVGKNSYNMPLLKEALAEAYTRLHNVLVSPPAGK
PISLLAVVIRPDQVLSGRPMPKRHIFQTRVFTPRKPYRPQVSSNDKYHSS
ASGSFGGIGGIGGGGGAGGGREVRMVSTNDYGGRGRGGGSGGGGGEEGGK
KRGRWSGGRREDQPASDFQARGDYNFNKRGRR*
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Synonyms
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