NO25G00230, NO25G00230 (gene) Nannochloropsis oceanica

Overview
NameNO25G00230
Unique NameNO25G00230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5656
Alignment locationchr25:58061..63716 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:58061..63716 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00230.2NO25G00230.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G00230.1NO25G00230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|206756gene_8505Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00230.2NO25G00230.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G00230.1NO25G00230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00230 ID=NO25G00230|Name=NO25G00230|organism=Nannochloropsis oceanica|type=gene|length=5656bp
ATGGATGAGCTCGCTGCGCCGCCACCAGTATCACGGACGACCGCGACGAC
GACGATGAAAGCAGCAAGTAGCGGTAGCAAAGCTGAGGCTGCCCGAGCGG
AGGGCAGCAGCCACACGAGGGGTAGAGCAAGGCGGCGGGAGGAAGGAGGA
CAGATCCTGAAGCATGGGGAAAGAGGAGGAGGAGGGGAAAGAGGGGGAGG
TACTGGACGGGGAGAAGAGGAAGGAAGAAGAAGAAGAGGAGAAGAAGGAG
GAGGAGAAGAAGGAGGAGGTGGGCTAAGCCCTTCTTCATCCCAACCCCTC
TCTATCTCCCTCACCAGGCCTCCCTTGCCCTCAAACTCACCAACATCACT
ATCTGGCAATGGTAATGGCACCAGAAGCAGAAGCCGAAGGAGGAGGAGGA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGGACGCGACCC
CTGCCGTCATCTACAGCTTTGTTGGAGACTTGGATGGGGAGGGAGGGAAA
GGAGGAGGGCGAGGGAGGGTCGGACCCTCATCTCTGCACGTCAACCCCTA
CTGATGCAATGGGTCATGGTAGCCGCTGGAGGAGGAAGTCTTCACCGACA
GCTGACGCAGGAGAGGGGGAAGGGCGGGATGGCGACGACGAGCGGGAGGA
GGAGGAGGAGGAGGAGGGGGACAGGGAGAAAGGGAAGGAGGATGTGAACG
AGGAGGAGGAGAGCGAGGAGGAGAGAGAGATGGAGGGGAGAGGTGAGGAG
GGAGAGGGGGCAGCAGGGCATGTTGCCAGGTGGCCTGAGACAGGGGAGAT
GGAGAGCACGAGGAGGAGGGAGGCAGGGATGGGGCGTGGAAGGAGGCGCC
GCCCTCACCGACGAAGGGAGAAAGGGATGGAAGGAGGGAGGGAGGGCGAG
CAGGACGATGCCTCCTTGTCTTCCCTCTCCTCCTCCTCCTCCTCCTCTTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCCCATCCTCTTTCTCCCGCG
GGGCGTCGTCGACCAGGAGCCAAGACTCGAAGAACAAATGGATCGCCCTG
CCTTCATCTACGgtgaggaagggagggagggaggaagggagggagaaagg
gagggggggaggtgggagggagggaggaggtcctgagggagggagggagg
gagggagggagggagaccaccagaggaatgccatgatgcctacagggact
caccactttatcggctcccttccctccctccctccttccctcagGACCTC
CTCCCCCTTGCCTTCCTCACCCTCCTCGGTCTACTCGCCACCTTCTGGCA
GTCCTCGTCCTCCTCCCCTTCCTCCTCCTCCTCCTCCCTCGCTTCCTCCT
CGCCCAAGGCTGAGGGAGGGGGGGATGGAGCGAGGGAGGGAGGGGCACCT
ATCCTGTCCATGGTGATGGGCATGGCAGCTTATGGAGTGGTAGTGGTCTT
GTCCCTAGGGGCGCTGAATgtaaggagggaggaagggagggagggagggg
tgggtcagtgatatccacgtccatgggcgtgtgggagggagggagggagg
gagggagggggagatcgggggggaggctgatttgtgttaaactatgaata
ctacctcactcatcgatctctgcttttgtgccctccctccctcccgcctt
ccctccctccctctgattcagCTGCTCTCCTCCCGTTTCGATCAAGAGGA
CAAGCTGGAGAGGCACCGAGAATCAGgcaaggagggagggagggagggag
ggagggagggcgggaagggaggagaggggacgagtcatgcgcccggtctg
ccagcctctcactctacccctccctccctccctccctccctccctccctc
cctcctttgtagGTTGGATGACGTACCAGCACAGAGACCGATTCGGCCTT
AGCGCCTGGCTCAGGCCGAGGAAAGgtgaggaggggggaagaggaagggg
ggaggaagggagggaagggagggagggggggaaaggagggagggagggaa
aggagggaggggggtagaacaagacgagacagctggaagttagcaaatcc
attcaacaaggaaccgctcccaccctccccccctccctctctctctccct
cccagCCCGGGAGCAGGTGCCCTCTTGCCGCTTGAGCAGGGAGGACATGG
AGGAGGAGGAGGAGGAGGAGGAGAGGAAGGAGCGGAGGAAGAGGAGGAAG
AAGAGAAGGAAACGAAAGGGGAAGGGGAGGCAAGGAAAGGGCCCGATTGG
CGGCCAGAGAGGCGCCCAGCCAGGAGGGAGGGAGGAGGGAGCCCCCTCTC
CCTCCCTTCCTCCCTCCCTCCCTCAGGAGGAGCAAGCCCAGCTGGCGGAG
GCCCAAGGGCAAGTGCAGGCATTGCGGCGACAGATGCAGgttcggaggga
gggagggagggagggagggagggaggaaagggggagggaaggagggcgaa
aaggactcactatgtattgatgttgtggtgttttacgtaccaccagGAGA
AAGCGCTGGAGGCCGAGAGGCAGGCCCGGGCCCTGGCCGCGGCACAGCAG
AAGGCAGTGCAGgtgaggaaggagggaaggaaggaaggagggagggagac
gtgatcggctaggcgcagcacgtcgactcacaattccccttccctccctc
cctccctccctccctccctccctccctccctccctcagGCTTCCCATGGA
GGGGCCAATGAACAGCTCCTCCGCTCTATGAAGGAGGCCCTGTCGGCCGC
TCGGGTCCAGAACACGTCCTTGCAGCTCCAGgtagggagggagggaggaa
gggagggagggtgagcgatggtgtttctcgttcttgtctatctgccgtgc
catgtttctcatccttgccttgtcgttcctcgccttgctgcagGTGAATT
ACTATGACTCGGAGCTTCACCGGGAACGGACACAACACTCGCAgtaagtc
gccccctccccccctccctccccctctccctccctccctcggaggctact
tactgccttggacgccttcctgacgtccctccctttccccatcccttcca
cagAGAAAAGGCCGAGCTTCTCTCCCGACAGCGACACGATCTTTCCACGC
TCTTCTCCATGATGGTTGCCCACTCTCCTTGCTCTGTCCGAGAGGCGCTG
ACGgtacctccccccccccccccctccctccctccctcctctcctatcga
cttcaactcaccgagcccgcccaaatgacgcctccctccctccctccctc
cagCTGACCCCCTCCGAGCCCCGCGCCGTGCTAGGCCTGCACCCGCCTTT
CTCTATCCTCCACGTGAACAAATCCTGGTCTTCCCACTTCCACTGGGATG
CCCACGAAATCGTAGGgtgcgtgccccgccctccctccttccctccctcc
ctttggtataaccgccactactccaaaagggcatttttctaaggttgctt
accctcctccctccgcccctccctcagGAACGACTTGGACTTCTTCAAGG
GCGTGCCTCTGGAGGGCCTCACCTCCTGGAAGAGCCTGCTCGAGAGCGTC
GGCTGgtaaggacatgcggtgtgggggtgtgggagtgtgggttagtgatt
tgagtgtttgtcgtactgtgtgtatgtatgtgtgctggaagagcctgctc
gagagcgtcgcctggtaaggacacgtgtgcccttcatcccctcctccttc
cctccttccctccttctatacccacctccctccattcatctcatattctt
tcccatcccacgaaccaccaccctccctccctccctccctccctccctca
gGTACGGCTACGCGGCCGCGGACGTGTTAATCCAGGGAGGAGGCGACACC
TTCTTCGTGCAGTCCCTCCTCATCACCCCGCTCATCGAGGCCAGgtaccg
agcgaggaagcgggggagggagggagggagggagggagggagggagggag
ggagggagggagggtgcagagccaagcacggcgactctcattcatcccgc
cacgaccaacacagGAACCGCGTTCCTCCCTCCTCCTCCACCTCACCCCC
TCCTCCTACTCGTCCTCCCCTTCCTCCTCCAATTCCCTTGCAAGGAGGAA
GGGGGAGGGAGGGAGGGAAGGAGGGAGGGCCGGGGACTGAGGTCGTCCGT
GTTGGCCATCTCGTTCGTTCCTCCGTGCGAAAAGTGCCGGAGCTGACAGA
Ggtagacctcccccccccctttccctccctccctccctccctccttttcc
tccttttttttacaatcccctcccttcggttccatctgctcacttttccg
tcctccctccctccctttcttccacggaacatgcagaagctctctttcac
gccctccatcgctcaccacccttcccttcctatctccctccctcctcccc
tcctttcccccccttctccctcagGACATGCGGCAGGCCCTCCGTCGCCC
AGCCCCCGAGGCTCTTGCGGTTGTGGACCCCCCCTTGAGCGAGGGAAGGG
GGGAGGAAGGGAGGGAGGAGGGGGTGGATCGGACGTCCCTGTCGGGGCTG
AAGGAGACGGGCGATGAGGGGGCGGCGTGTCAGCTGTTGCTCATGCGgtc
ggcggggagggaggaagggagggagaaagggagggggaaaggaagggagg
gagggagggagaaaggaggtgaggggaatctggcactggatatatgcggc
ttagtcctctttccccccttccctcctcctccctccctcagCTGCCAAGA
GCAATCGCTCATGCAAAATCTGTGGACCCTCAGGGAGCTGGGTAACGAGT
TCCCCCTCTTCCTCGTCGACCAGGGCGGGCGACTGCTCTCGGGGAACCTG
GCCTTCTCGgtacgtccctccctccctccctccctccctccctccccccc
tctccctcgtcgcgtcgacatcggcaggaaatgactgctctcaggaaata
tcgctccttgagcatacctctatctcccactctccctcctcccctccctc
cctccctcatcaaaactttcctctttctcccccgtccaattcctccccct
tcctcccttcctccctccctccctccctccctccctcccttcctccctct
cccagGTCCTGACTCAACGGCCGATGCGAGAGATGGAAGGGCTTACCCTC
GAGGCCCTCCTCGCCCTCCTTCTCCTTCTCATACTCCCCCAACATCACTA
CGAAGGAAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGTCGATTGGGAGA
AAGGCTGGGAGGCGCGGTTGCGAGAGAGCGCAGATCGgtacgtggttgct
ctctctccctccctccttccccctctctctctccatccgccgcaccgccc
gctgatccgcccacacaaattccttctctccctcccaccctccctcccgc
cctccctcagAGCCAGCCCCAGCCCCTCGCCCGTCGTCGTCTCCTCCCCC
CTCCCCTTCCCTCCTCCCCCCTCCTATTCTCCCACCGAGGAGGGAGGGCG
GGAGAGAGAGCGAGAAGGAGGGCTTGCTCGAGACCGGCTAGTGCGGGTGT
GGATGGTACGGCTGCCGGCGGCGGACAGCGCCTATATGGGCTGCCTCTCC
CTTGTGTGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAG
GGAGGG
back to top

protein sequence of NO25G00230.2

>NO25G00230.2-protein ID=NO25G00230.2-protein|Name=NO25G00230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1095bp
MDELAAPPPVSRTTATTTMKAASSGSKAEAARAEGSSHTRGRARRREEGG
QILKHGERGGGGERGGGTGRGEEEGRRRRGEEGGGEEGGGGLSPSSSQPL
SISLTRPPLPSNSPTSLSGNGNGTRSRSRRRRRSSSSSSSSSSSSSRTRP
LPSSTALLETWMGREGKEEGEGGSDPHLCTSTPTDAMGHGSRWRRKSSPT
ADAGEGEGRDGDDEREEEEEEEGDREKGKEDVNEEEESEEEREMEGRGEE
GEGAAGHVARWPETGEMESTRRREAGMGRGRRRRPHRRREKGMEGGREGE
QDDASLSSLSSSSSSSSSSSSSSSSSLPSSFSRGASSTRSQDSKNKWIAL
PSSTDLLPLAFLTLLGLLATFWQSSSSSPSSSSSSLASSSPKAEGGGDGA
REGGAPILSMVMGMAAYGVVVVLSLGALNLLSSRFDQEDKLERHRESGWM
TYQHRDRFGLSAWLRPRKAREQVPSCRLSREDMEEEEEEEERKERRKRRK
KRRKRKGKGRQGKGPIGGQRGAQPGGREEGAPSPSLPPSLPQEEQAQLAE
AQGQVQALRRQMQEKALEAERQARALAAAQQKAVQASHGGANEQLLRSMK
EALSAARVQNTSLQLQVNYYDSELHRERTQHSQEKAELLSRQRHDLSTLF
SMMVAHSPCSVREALTLTPSEPRAVLGLHPPFSILHVNKSWSSHFHWDAH
EIVGNDLDFFKGVPLEGLTSWKSLLESVGWYGYAAADVLIQGGGDTFFVQ
SLLITPLIEARNRVPPSSSTSPPPPTRPPLPPPIPLQGGRGREGGKEGGP
GTEVVRVGHLVRSSVRKVPELTEDMRQALRRPAPEALAVVDPPLSEGRGE
EGREEGVDRTSLSGLKETGDEGAACQLLLMRSAGREEGREKGRGKGREGG
REKGGEGNLALDICGLVLFPPFPPPPSLSCQEQSLMQNLWTLRELGNEFP
LFLVDQGGRLLSGNLAFSVLTQRPMREMEGLTLEALLALLLLLILPQHHY
EGREGGREGGREVDWEKGWEARLRESADRASPSPSPVVVSSPLPFPPPPS
YSPTEEGGREREREGGLARDRLVRVWMVRLPAADSAYMGCLSLV*
back to top

protein sequence of NO25G00230.1

>NO25G00230.1-protein ID=NO25G00230.1-protein|Name=NO25G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1047bp
MDELAAPPPVSRTTATTTMKAASSGSKAEAARAEGSSHTRGRARRREEGG
QILKHGERGGGGERGGGTGRGEEEGRRRRGEEGGGEEGGGGLSPSSSQPL
SISLTRPPLPSNSPTSLSGNGNGTRSRSRRRRRSSSSSSSSSSSSSRTRP
LPSSTALLETWMGREGKEEGEGGSDPHLCTSTPTDAMGHGSRWRRKSSPT
ADAGEGEGRDGDDEREEEEEEEGDREKGKEDVNEEEESEEEREMEGRGEE
GEGAAGHVARWPETGEMESTRRREAGMGRGRRRRPHRRREKGMEGGREGE
QDDASLSSLSSSSSSSSSSSSSSSSSLPSSFSRGASSTRSQDSKNKWIAL
PSSTDLLPLAFLTLLGLLATFWQSSSSSPSSSSSSLASSSPKAEGGGDGA
REGGAPILSMVMGMAAYGVVVVLSLGALNLLSSRFDQEDKLERHRESGWM
TYQHRDRFGLSAWLRPRKAREQVPSCRLSREDMEEEEEEEERKERRKRRK
KRRKRKGKGRQGKGPIGGQRGAQPGGREEGAPSPSLPPSLPQEEQAQLAE
AQGQVQALRRQMQEKALEAERQARALAAAQQKAVQASHGGANEQLLRSMK
EALSAARVQNTSLQLQVNYYDSELHRERTQHSQEKAELLSRQRHDLSTLF
SMMVAHSPCSVREALTLTPSEPRAVLGLHPPFSILHVNKSWSSHFHWDAH
EIVGNDLDFFKGVPLEGLTSWKSLLESVGWYGYAAADVLIQGGGDTFFVQ
SLLITPLIEARNRVPPSSSTSPPPPTRPPLPPPIPLQGGRGREGGKEGGP
GTEVVRVGHLVRSSVRKVPELTEDMRQALRRPAPEALAVVDPPLSEGRGE
EGREEGVDRTSLSGLKETGDEGAACQLLLMRCQEQSLMQNLWTLRELGNE
FPLFLVDQGGRLLSGNLAFSVLTQRPMREMEGLTLEALLALLLLLILPQH
HYEGREGGREGGREVDWEKGWEARLRESADRASPSPSPVVVSSPLPFPPP
PSYSPTEEGGREREREGGLARDRLVRVWMVRLPAADSAYMGCLSLV*
back to top
Synonyms
Publications