NO25G00190, NO25G00190 (gene) Nannochloropsis oceanica

Overview
NameNO25G00190
Unique NameNO25G00190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2203
Alignment locationchr25:40091..42293 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:40091..42293 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00190.1NO25G00190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|206185gene_8498Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00190.1NO25G00190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00190 ID=NO25G00190|Name=NO25G00190|organism=Nannochloropsis oceanica|type=gene|length=2203bp
GGTAATGATGGTGATGAGCTAGTGATAAAGTATGAGTGGAGCTTGCTTGC
TGTTACTGTGGAGTGCTATAGCTCGATGGGGGGCAAGCAGTTGGCATCGC
GAACTTCTCCAGGTTTTGTGCCGCCAGATCTTCTACAAATAAATTGAAAG
CGTGTGCTTCCAAAGAATTGTACTGGGCATGTGCTCTTTTGCATTCACCC
CCAAGCACTTTGAACCACTGCCGCACACATGCAAAATCACCACTACACAC
ACTCCGCAGGCCAGAGCCTGCTTGTCGGGGTGTGACACGCGTACGTGTCG
CATGCACTGCTGATCCAGAATGGCCGGCTGGCTGTTATATGGGGCGTCGG
CGCTGGTCAAACCAAACCCTGTCTGCCTGTCTGGAATGAAGACGTTGGTA
GAGCGTGCTTGAGCTACAAATTGACACATTCCACGATATTGTTGCCCTCA
TCCTACCCTTTATCTTCCCTCTCCGGGCAACACAGGCACGAGGCAACATC
CCGAAAAGCGGCAGCAGTAGCTGCGGCGGCAGCAGCAGCACCAGCAGCAC
CAGCACCAGCCGCAGCAAGAATAGCGTCTGACATCCACATTCAGCAGCAG
TACGGACCACAGAAAAATGACAAACGAAAAGgtacgtcctaaactcttct
ctctctccctccgtccctccgtctctccgtccctccctccttctacccct
ctctccgtcattccctcacctccctcgccagccgagcctctcaatcttcc
ctcctactatcgtcctcctaccaatctttaattttccccaataagtattc
atgatttataaacccacgttctcacatacgtcccctcccttcctccctcc
ctccttccctccctctcaagCGCGGCGTTTCGTTGCCATGGTTTTTTTTA
GCGTGCCTTGGCTCTATCGGCGGCATCATCTTCCTAGCTCTGGCAGAGGG
GAGTAACGgtgagaagatgagggagggaaggagggaaaggatgaagctag
acgcagcatgacctggacctacgcagcaagagtgatgactcacttccctt
ccctccctccttccctccctccctccctctttcctatccagAATGGCTCG
TCGCTCGCGTAAAAGATCCGCAGCTCCCACAAAAACTAACTGTTGGTCTC
TACACTGGCTATCAGgtagggagggagatagggaaggagggagggaagga
ggtgcgagccatcagttgaacgttcgtttccatagagtctgaccacccgc
ccttcctccctccctccctccctcctttcagCGACTGGGCAACGTCCCAC
CGTCCCTCTTCGATCCTGCCTGGTGTGGCGCCGACGACAACCACTTGTCG
GCCTCCCTCCCCTCCACGCCGTGGTGCTCCTCCGTCACTGCTGTCAAGGC
CCTCACCCTCACTGGCCTCCTCCTGGTGGGCTTCGCCCTCTTTCCCTACC
TCTGGTTTCTCGGAACTCCCgtgcgttccccacccgccctctcttcctcc
ctcccttccttcctccctccctccctccaatccaacgtgtcgtttcacgc
accgtggacgtgcaatctctccctccttcctcctccttatcctcccttct
tctcatccttcctccttctctccctcagCCAAAGCCCCTCCAGATCGCCT
TTGCTCTAGTTACTCTCCTCGGCACCATTGCTTGCGCCCTCTCTGCTTAC
TTCTGGATGGACGTGCAGgtacccctccgtccgtccgtccctccctccct
ccctccctccctctttccttccctccctcccttcgcccttctctatctgg
tataccgagcactaccccacccacccacccctccttccctccccctcctt
ccctccctggacagCACGGGTTTTGTCCCTCCCTCGCCCCCTCTTTCCGC
ACCGTCGACACTGCCTTCACTTGTCGCCCCAGTCGGGATTTTTTCTTCCT
CTGTCTGGCTGGCCTCCTCTTCCTTCTGGCCTCCTTCTCCTCCTTCTTCA
CTGCCCGCCTTCCTGCCCCCTCACCGTCGGCCCTGGCGGTGTCGGGGAAC
GCGAAGATGATCAATGAGGAGGAGGGGGAGGGCGGGGGGGGAAAGGGCTC
GAATGACCCGCTGCCGGTGGCGGTGGTGGAGGGAGGGGAGGAAAATGGAA
GGCATGTATGAGGGAGGAAAGGAGGGAGGGAGGGAAGGAGGGGGGGAGGG
AAG
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protein sequence of NO25G00190.1

>NO25G00190.1-protein ID=NO25G00190.1-protein|Name=NO25G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=251bp
MTNEKRGVSLPWFFLACLGSIGGIIFLALAEGSNEWLVARVKDPQLPQKL
TVGLYTGYQRLGNVPPSLFDPAWCGADDNHLSASLPSTPWCSSVTAVKAL
TLTGLLLVGFALFPYLWFLGTPPKPLQIAFALVTLLGTIACALSAYFWMD
VQHGFCPSLAPSFRTVDTAFTCRPSRDFFFLCLAGLLFLLASFSSFFTAR
LPAPSPSALAVSGNAKMINEEEGEGGGGKGSNDPLPVAVVEGGEENGRHV
*
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Synonyms
Publications