NO24G02240, NO24G02240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02240 vs. NCBI_GenBank
Match: EWM24434.1 (putative tyrosinase-like protein in chromosome [Nannochloropsis gaditana]) HSP 1 Score: 505.8 bits (1301), Expect = 1.400e-139 Identity = 265/454 (58.37%), Postives = 311/454 (68.50%), Query Frame = 0 Query: 1 MPMVRGDQLSKEVHDAYDPGVDDFGFVTGSPFTLNSSPFVTRSATVCGLPMALPMAPAQNLFDCYENFDTWREATTCMYMQVHLQLHSHLGGGAWNCGVDLKSFHSSYPQYPPELLSFLGVSGRHVWSTLKTRNTRGLIRYRECDIHAGHCSCPDLDTERMPYPKLYSLLASALRGASRTWPGEFFIGTYRDTEELRFKKNDGTFFEWEDQERLLRMVARLWCEAAVDGHFVSMASINDPVFYAAHVYFDRLSHFLALSPAFAERGFNRTWNFDDEEGGA-----------RRQEAEDGG--EDMKQNREQWDQGEYREREERENGLQGGGPRRLRGANRLQEEPSSDNHGQDDGETETARSKNDDTERIYHQVPREECLGGQYQDSSPFTPFLLMSVDEERRLGDIPDKDYGDSNPHRNYIMRDLDALMHPLHPALPYVYDDLVHWGGEMWMP 442 MPMVR + L ++V AYDPGVD +GFVT FTLNSSPFVTRS TVC LPMALPMAPAQNLFDCY++F+TW+EAT+C+YMQVHLQLHSH GGGAW+CGV+LK F S+PQY ELLSFLGVSGR +GL +RECD AG C CP LD+E MPY KLY LLAS LR R WPGEFF+ YR TEELRF KNDG F +WEDQ+RLLRMVARLWCE AV+GHFVSMASINDPVFYAAHVYFDRLSHFLALSPAF ERGFNRTW+ EGG R++EA+D D + E D R R+ R +G RR+ +R E S+ Q + + + E I ECLGG+Y D SPFTP+L+ + DE+ ++D P R+Y M+++D LMHPLHP+LPYVYDDLVHWGG+ W P Sbjct: 545 MPMVRAEDLPEDVMRAYDPGVDAYGFVTSKSFTLNSSPFVTRSETVCDLPMALPMAPAQNLFDCYDSFNTWKEATSCLYMQVHLQLHSHFGGGAWHCGVNLKEFQKSFPQYSSELLSFLGVSGR----------AQGLRGFRECDREAGRCHCPGLDSENMPYYKLYRLLASDLRQVRRAWPGEFFLAPYRGTEELRFLKNDGNFHDWEDQDRLLRMVARLWCETAVNGHFVSMASINDPVFYAAHVYFDRLSHFLALSPAFMERGFNRTWS--KAEGGGEGLQEKGEVKHRQREADDADWERDFEGRGEIEDDVMARNRQVRYR--RGRLRRRVEAGDR--ETSSARGATQQVEQRDVPEDWDSPKESIASDGEMRECLGGRYTDPSPFTPYLMAAADEDEEERVAKEQDL---YPGRHYSMKEIDELMHPLHPSLPYVYDDLVHWGGKQWDP 979
BLAST of NO24G02240 vs. NCBI_GenBank
Match: XP_005853374.1 (putative tyrosinase-like protein in chromosome, partial [Nannochloropsis gaditana CCMP526] >EKU22986.1 putative tyrosinase-like protein in chromosome, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 327.0 bits (837), Expect = 9.000e-86 Identity = 152/206 (73.79%), Postives = 168/206 (81.55%), Query Frame = 0 Query: 55 MAPAQNLFDCYENFDTWREATTCMYMQVHLQLHSHLGGGAWNCGVDLKSFHSSYPQYPPELLSFLGVSGRHVWSTLKTRNTRGLIRYRECDIHAGHCSCPDLDTERMPYPKLYSLLASALRGASRTWPGEFFIGTYRDTEELRFKKNDGTFFEWEDQERLLRMVARLWCEAAVDGHFVSMASINDPVFYAAHVYFDRLSHFLALSP 261 MAPAQNLFDCY++F+TW+EAT+C+YMQVHLQLHSH GGGAWNCGV+LK F S+PQY ELLSFLGVSGR ++ RG +RECD AG C CP LD+E MPY KLY LLAS LR R WPGEFF+ YR TEELRF KNDG F +WEDQ+RLLRMVARLWCE AV+GHFVSMASINDPVFYAAHVYFDRLSHFLALSP Sbjct: 1 MAPAQNLFDCYDSFNTWKEATSCLYMQVHLQLHSHFGGGAWNCGVNLKEFQKSFPQYSSELLSFLGVSGR-------AQDLRG---FRECDREAGRCHCPGLDSENMPYYKLYRLLASDLRQVRRAWPGEFFLAPYRGTEELRFLKNDGNFHDWEDQDRLLRMVARLWCETAVNGHFVSMASINDPVFYAAHVYFDRLSHFLALSP 196
BLAST of NO24G02240 vs. NCBI_GenBank
Match: CBJ31106.1 (polyphenol oxidase protein [Ectocarpus siliculosus]) HSP 1 Score: 96.7 bits (239), Expect = 2.000e-16 Identity = 68/263 (25.86%), Postives = 114/263 (43.35%), Query Frame = 0 Query: 24 FGFVTGSPFTLNSSPFVTRSATVCGLPMALPMAPAQNLFDCYENFDTWREATTCMYMQVHLQLHSHLGGGAWNCGVDLKSFHSSYPQYPPELLSF-LGVSGRHVWSTLKTRNTRGLIRYRECDI-HAGHCSCPDL-DTERMPYPKLYSLLASALRGASRTWPGEFFIGTYRDTEELRFKKNDGTFFEWEDQERLLRMVARLWCEAAVDGHFVSMASINDPVFYAAHVYFDRLSHFLALSPAFAERGFNRTW----NFDDEEGG 280 +GFV GS + + P V R+++ CG+ + + C+E+ D+ + CM VH +H +GGG ++C V++ F PQ+ PELL+F L + W + +CD+ C C + D +Y + A+ + G+ FI +G + E L+R + + CE G + A+ DP+F+A H FD+ H L LSP + + ++ W + DD GG Sbjct: 254 YGFV-GSTYNYQALPGVLRTSSYCGMQGVSEFSKCEVFVGCFEDNDSLYDWAVCMEHSVHASMHGMIGGG-FDCNVNMAEFQEDNPQFSPELLTFTLQFLLANKWPSNSLMEDFNYCD-EDCDVGQTDPCGCTCITDPFEWTDDAIYDFMEGAMETLQQRAHGDEFIDEDSSARHPLGFAQEGKRLDEESTMLLMRQLMVIGCEPGKVGAMSTGAAPLDPIFWALHAGFDKAQHILQLSPGYRDT-YDFAWVDSESCDDMSGG 512
BLAST of NO24G02240 vs. NCBI_GenBank
Match: CBJ31897.1 (n/a [Ectocarpus siliculosus]) HSP 1 Score: 95.5 bits (236), Expect = 4.400e-16 Identity = 76/269 (28.25%), Postives = 121/269 (44.98%), Query Frame = 0 Query: 18 DPGVDDFGFVTGSPFTLNSSPFVTRSATVCGLPMALPMAPAQNLFDCYENFDTWREATTCMYMQVHLQLHSHLGGGAWNCGVDLKSFHSSYPQYPPELLSFL------------GVSGRHVWSTLKTRNTRGLIRYRECDIHAGHCSCPDLDTERMPYPKLYSLLASALRGASRTWPGEFFIGTYRD---TEELRFKKNDGTFFEWEDQERLLRMVARLWCEAAVDGHFVSMASINDPVFYAAHVYFDRLSHFLALSPAFAERGFNRTW 272 +PG +G++ + + + + V+R+A+ CG+ + A + +C+E +D E CM QVH H + GGA+NC VD+ F P LLSF G H +T T T G + ++C C+C D D ++Y + S + G ++ YRD T + F++N G E +D L+R + L CE G SI DPVF+A H F++ + L LSP + + ++ TW Sbjct: 389 NPGYSLYGYI-DARYNIQAVDGVSRTASYCGVRGEIEFATCNVIINCFEQYDNISEWNECMENQVHAANHGMM-GGAFNCNVDMVQFQEDNPGLKAGLLSFALEYILVGMWPSNSFMGDH--NTCDTSCTVG--QTQDCG-----CTC-DTDFHDWSDDEVYDKMESQMETMQNRAHGTKYV--YRDDGATYQYGFQQN-GVRLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQILQLSPTYKDT-YDFTW 641
BLAST of NO24G02240 vs. NCBI_GenBank
Match: CBJ31102.1 (tyrosinase-like protein 2 [Ectocarpus siliculosus]) HSP 1 Score: 94.7 bits (234), Expect = 7.500e-16 Identity = 67/256 (26.17%), Postives = 108/256 (42.19%), Query Frame = 0 Query: 22 DDFGFVTGSPFTLNSSPFVTRSATVCGLPMALPMAPAQNLFDCYENFDTWREATTCMYMQVHLQLHSHLGGGAWNCGVDLKSFHSSYPQYPPELLSF-LGVSGRHVWSTLKTRNTRGLIRYRECDIHAGH-CSCPDL-DTERMPYPKLYSLLASALRGASRTWPGEFFIGTYRDTEELRFKKNDGTFFEWEDQERLLRMVARLWCEAAVDGHFVSMASINDPVFYAAHVYFDRLSHFLALSPAFAERGFNRTWNFD 275 + +GFV G + + P V R+ + CGL + DC+E+ T+ +CM +QVH +H +GGG ++C +D+ FH PQY LL+F L + W + +CD+ G C C L D ++Y + L G ++G +G + E LLR + + C+ G + A+ DP+F+ H F++ H L LSP G+ + FD Sbjct: 437 NSYGFVDGI-YNFQALPGVIRTNSYCGLEGMAEFTKCEVFVDCFESSGTFYAWASCMELQVHASIHGMIGGG-FDCNIDMVEFHKENPQYHHGLLTFVLEYLLANKWPSNSLMGDLNECA-EQCDVDQGEPCGCTCLVDPFEWTDDEVYDFMEHVLVRLRGRAKGVSYVGEDVTARHPLGFMQEGERLDEESTMLLLRQMMAIGCQPGKVGAMSTGAAPLDPIFWTLHSGFEKAQHILQLSP-----GYRDAYGFD 684 The following BLAST results are available for this feature:
BLAST of NO24G02240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02240 ID=NO24G02240|Name=NO24G02240|organism=Nannochloropsis oceanica|type=gene|length=1335bpback to top protein sequence of NO24G02240.1 >NO24G02240.1-protein ID=NO24G02240.1-protein|Name=NO24G02240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top Synonyms
Publications
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