NO24G02230, NO24G02230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02230 vs. NCBI_GenBank
Match: EWM24434.1 (putative tyrosinase-like protein in chromosome [Nannochloropsis gaditana]) HSP 1 Score: 263.1 bits (671), Expect = 1.900e-66 Identity = 185/511 (36.20%), Postives = 242/511 (47.36%), Query Frame = 0 Query: 7 EDVDDELGGSGATDKELDCSEAYLLEDEHRQEHMPNRVKQIPHGNLTTFSGQSTPPPLSAAPLNVKPRPWYWPRSAPYLLLLAFGALYFGVRPYLFSTHDS-----------NMTTTSTTDAVALPILAPS-------STVALTKSPEV--SEGPNTSLPPMKKPAPSP----YSLLNSTAALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSIPPPSTPLHIQASSAEYGSFAKDTLQLYGWDLILEANRAITLRVLNP------SPPSMPAXXXXXXXXXXXXXNRTDISPNLSTYDWCVKQHNGTILLSLRAVGSLVKGFYCTQPGAGLSIHVTEYPSLRTYSTTAAVCKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNSQTWCLHGPNQFLAVHSAFVYWGEQNMKRISYVD 488 +D D+LG SG TD E+D SEA+LLE P+ K P+ + +++PP + +V+P W R PY L+ GALY G R Y+ S H+S N ++ + + +L P+ + ++ PEV S N SL P K A P +L NST L P+ TPLHIQA SA+YG+ A++TLQLYGWD+I+EA R TLRVLNP SP S P + TYD+ V++ G ++ S R VG LV CTQ G+ L++ VTE PSLR+Y T +AVCK+VRREMR LTR DRQ YL+SL+ FYR+PLA+GRAR+GPRFANN LLT+AH+S+ WCLH PNQF+AVHSAF++W EQNMKRIS V+ Sbjct: 7 DDKSDDLGISGVTDGEVDDSEAFLLEKSAWAGPSPSSKK--PNDDKLLTPARTSPPDQA----SVQPYSSCWHRLTPYYALVTLGALYLGARSYIHSQHNSSPPDAIMNISFNSSSLRSKSSFYTQVLDPNKNIHPPVKVIETSRVPEVPSSSYHNLSLTPTSKAADMPPFPSSALSNSTKILLRDGRNASGTQPKSMSSSSSMPSVPPGASPSNFITSSTSHASIISPSGSE---------------------------------------------------PTHDLAQTPLHIQAYSADYGAIAEETLQLYGWDMIIEAKRPTTLRVLNPLHTLDSSPLSSPPTRRTSSSRYHEFGD--------MTYDFEVQEEGGNVVFSRRGVGRLVHDVTCTQAGSTLTVQVTERPSLRSYRTFSAVCKEVRREMRTLTRDDRQTYLESLDIFYRIPLADGRARYGPRFANNALLTAAHSSEIWCLHDPNQFMAVHSAFMHWAEQNMKRISAVE 452
BLAST of NO24G02230 vs. NCBI_GenBank
Match: CBJ31897.1 (n/a [Ectocarpus siliculosus]) HSP 1 Score: 90.5 bits (223), Expect = 1.700e-14 Identity = 58/212 (27.36%), Postives = 97/212 (45.75%), Query Frame = 0 Query: 284 EYGSFAKDTLQLYGWDLILEANRAITLRVLNPSPPSMPAXXXXXXXXXXXXXNRTDISPNLSTYDWCVKQHNGTILLSLRAVGSLVKGFYCTQPGAGLSIHVTE------------YPSLRTYSTTAAVCKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNSQTWCLHGPNQFLAVHSAFVYWGEQNMKRI 484 EYG + + L LYG+D+++E + T+ V P+ S D P + V + + T GS VK T+ GA ++HV + + + T CK VRRE+R LT DR + ++ FY V L G+ ++G FAN+ ++++ HN++ +C H FL H++F W E++++ I Sbjct: 123 EYGEYDRGALALYGFDMLVEPYKKTTISVTGPASSS------GSISYSWLLVREDDDEPEAVELE--VVEQDDT------PSGSSVK-VTLTEAGATYALHVQQQQLAPEGGGDASVAVVVSEKTIQVACKHVRRELRDLTSADRTAFFSAMREFYTVNLEAGKEKYGKTFANSKIISTYHNTRNYCFHSGMHFLNAHASFDLWAERSLQMI 319
BLAST of NO24G02230 vs. NCBI_GenBank
Match: CBJ31102.1 (tyrosinase-like protein 2 [Ectocarpus siliculosus]) HSP 1 Score: 89.0 bits (219), Expect = 4.900e-14 Identity = 74/227 (32.60%), Postives = 115/227 (50.66%), Query Frame = 0 Query: 276 LHIQASSAEYGSFAKDTLQLYGWDLILEANRAITLRVLNPSPPSMP--------AXXXXXXXXXXXXXNRTDISPNLSTYDWCVKQHNG--------TILLSLRAVGSLVKGFYCTQPGAGLSIHVTEYP---SLRTYSTTAAVCKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNSQTWCLHGPNQFLAVHSAFVYWGEQNMKRI 484 L ++A++ EYG + + L LYG ++++E +RA + V + P +P XXXXXXXXXXXXX Y W + + + T L+ +A G L T G ++ V + +L + CK VRRE+R+LT +DR + ++ FY V L EGR ++G F+N + + HNS +C H FL H+AF W E+N+++I Sbjct: 136 LELRATN-EYGEYDRGALALYGLEMVVEPHRATRITVSSSRPRRLPPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYYWLLVRADRSGAPLDGVTPLVDTKAAGPLAT-VTLTDAGEKYALLVQQVEAGGALIAEARVTITCKYVRRELRSLTGEDRTGFFAAMREFYTVSLEEGRGKYGEGFSNAKHVAAYHNSPDYCFHNGMHFLNAHAAFDLWVEKNLQKI 360
BLAST of NO24G02230 vs. NCBI_GenBank
Match: XP_009039249.1 (hypothetical protein AURANDRAFT_65957 [Aureococcus anophagefferens] >EGB05990.1 hypothetical protein AURANDRAFT_65957 [Aureococcus anophagefferens]) HSP 1 Score: 84.3 bits (207), Expect = 1.200e-12 Identity = 63/212 (29.72%), Postives = 92/212 (43.40%), Query Frame = 0 Query: 274 TPLHIQASSAEYGSFAKDTLQLYGWDLILEANRAITLRVLNPSPPSMPAXXXXXXXXXXXXXNRTDISPNLSTYDWCVKQHNGTILLSLRAVGSLVKGFYCTQPGAGLSIHVTEYPSLRTYSTTAAVCKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNSQTWC--LHGPNQFLAVHSAFVYWGEQNMKRI 484 TPL + ++ EYG A +L LY + + E +RA L + + +TY W V+ + A + F T PG ++ + E PS RT + CK VRRE+RALT ++R Y + ++PL EGRAR+G F N T H T C HG FL H+AF Y ++ M+ + Sbjct: 59 TPLRFRVANPEYGDAAPASLALYPFAHVGEPHRASRL--------------------------TAEDAVGGATYAWTVRLDGALVASGAGATFA----FNFTAPGRRYAVALAESPSGRT-AEDDVHCKYVRREIRALTDRERSAYFDAFEVVAKLPLEEGRARYGEHFVNLHSTTIKHVHGTGCSPFHGGLSFLTAHTAFTYEVDRAMQLV 239
BLAST of NO24G02230 vs. NCBI_GenBank
Match: CBJ30277.1 (TYRosinase family member (tyr-3) [Ectocarpus siliculosus]) HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10 Identity = 61/218 (27.98%), Postives = 103/218 (47.25%), Query Frame = 0 Query: 272 PSTPLHIQASSAEYGSFAKDTLQLYGWDLILEANRAITLR---VLNPSPPSMPAXXXXXXXXXXXXXNRTDISPNLSTYDWCVKQHNGTILLSLRAVGSLVKGFYCTQPGAGLSIH-VTEYPSLRTYSTTAAVCKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNS--QTWCLHGPNQFLAVHSAFVYWGEQNMKRI 484 PS L ++A++ EYG + K +L++YG D+++E R+ T+ +L SP M N + W + + L G+ LS+ V E + T + CK VRRE+R LT +DR+ +L ++ +Y +P G+ R+GP F+N ++T+ HN+ + +C H QFL H+AF E+ ++ I Sbjct: 16 PSPKLKLRATN-EYGEYDKASLKMYGLDMVIEPFRSTTVTAEGMLIDSPAHMYVWRLRYADQEGAPQN-----SGTAGDAWNCTTGKPQVTVELERPGT----------AYFLSVESVDENGRVITEGNSKVSCKYVRREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMI 217
BLAST of NO24G02230 vs. NCBI_GenBank
Match: CBJ31106.1 (polyphenol oxidase protein [Ectocarpus siliculosus]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0 Query: 401 CKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNSQTWCLHGPNQFLAVHSAFVYWGEQNMKRIS 485 CK VRRE+R LT DR + ++ Y V L EGRA +G F + + + HN++ +C H FL H+AF W E N+++I+ Sbjct: 94 CKYVRRELRGLTMADRTGFFAAMRELYTVSLEEGRALYGDGFYDAKHMAAYHNTRDYCFHNGMHFLNAHAAFDLWIESNLQKIN 177
BLAST of NO24G02230 vs. NCBI_GenBank
Match: CBJ31107.1 (Common central domain of tyrosinase family protein [Ectocarpus siliculosus]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 33/92 (35.87%), Postives = 57/92 (61.96%), Query Frame = 0 Query: 395 STTAAVCKDVRREMRALTRQDRQMYLKSLNTFYRVPLAEGRARFGPRFANNPLLTSAHNS--QTWCLHGPNQFLAVHSAFVYWGEQNMKRIS 485 +T CK VRRE+R L+ DR+ +L ++ +Y V +GRA++G F + LL S H++ +++C H QFL H+AF E+++++I+ Sbjct: 119 ATIKVSCKHVRRELRDLSEADREAFLDAMEAYYAVSKEDGRAKYGEGFFDYQLLASYHSADLKSFCYHAGVQFLTAHAAFGLMLERSLQKIN 210 The following BLAST results are available for this feature:
BLAST of NO24G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02230 ID=NO24G02230|Name=NO24G02230|organism=Nannochloropsis oceanica|type=gene|length=1581bpback to top protein sequence of NO24G02230.1 >NO24G02230.1-protein ID=NO24G02230.1-protein|Name=NO24G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bpback to top Synonyms
Publications
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