NO24G02220, NO24G02220 (gene) Nannochloropsis oceanica

Overview
NameNO24G02220
Unique NameNO24G02220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2058
Alignment locationchr24:592340..594397 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:592340..594397 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR077ncniR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G02220.1NO24G02220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611210gene_10365Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|598802gene_7447Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G02220.1NO24G02220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G02220 ID=NO24G02220|Name=NO24G02220|organism=Nannochloropsis oceanica|type=gene|length=2058bp
CTTTACGTTCTGCTGCTCTTTGTGTATATTGTTTGTACACTAATTGTATA
TCTTGTTTTTCATTTACTCTTGACCTTGTTGTCTGCACATTTCTGCTGGA
TCGGTGACATTCTCAGACTGTCTAGCAGCTCAACCTCCTCCCCAAAACCT
TTCTACCAACTTGTAATGCGTCGTGACACAAGTATGCATATCCTCCCCTT
TACTTAAGGTGACCTTTGCACTCACTCCCATGACTTAGTCCGATCTTTCC
CGCCCTGCATACCAGCGCATGGCACATGTCTTCTGCGCTACCTCCCGTCT
CATCTACCCCTCTCGTGCGCCACCCGGAGCCTTTACCCTTCACTTCACCC
TCGTCCTTTTTTACGATACTTCTGTGACATCGATATTGATCATGCTAAAG
CCTTGTAATATGTTCGAGTTTTTTCTCACTGATAGGTCCTACTACCTCTA
CATTCCGCCTCCCCACAAACTACACAGCCAACAACAAAAGCGACTACTAT
CAAACAAAGCCTACATGCGTTTCAACAATATCATCCTCGTCCTCCCCTTT
GTCCTTGCAGCGGGCAACCCCTTCTTCGCCAGCGGCCAAGAGACCACCTC
GAGCCTGCGTGGGACGAACAACAAGGACATTGCGAGTACCACCAATGACG
ATGACAAGCAAATTGATAAATTGGGCACCGCCGAGACGATCCCTGTCGTC
CCCGTCGAAGAGCCTGTCCCACCCATGGAGCCAATGAAGGCAGAGAGAGA
AATGGAAGGCGGGCAAAAGGAAAATACTATGGTTGAGGGCCACGAGGGAG
GAAGAGAGAAAGGGGGGATGGGGCACAACTCGAAGGGCGAGGTTGTCGAC
AACAAGGGGATGGACGACGACATGATCACCGAAGGCGACAATGGCCTCCA
ATTTGAGAGCGCAGGTCCCTCGGAGGGAGATAAGGGATACTACAAAGGTG
GGTGGGGGCGTGGGGGTTGGGGATGGAGGAAAAAAGGCGGGTGGAACAGG
AACTACAACAATAACTGGAATAACCAGAGGGGGTGGGGCCGCGGAGGCTG
GTAGAGACTAGGAGGCTGCTTGAATGTGATTCATCACGATGTTGGAAGGG
TGGGAGGAGAGAGAGACGCCAATGAGGCTACAACCGGCGCCATTTTTTTT
ACTGTCCTCTCCATTGCTGTCTGAGGCCTCTACACAGAAATACAAACAGA
AAATGAGTGGAACCCCTCCAAAAAAAGAGGCAGCATGCCCACATTTAGGC
CAGGGTAAAGAAAATGAAAGGGAAATAAAAAAGAAAGGAAAAGGAAAAGA
GGGAGGGGGAGGATTAAGGGAAAGAAGATAAAGAAGAGGGGTGCTAGGAT
GATGATGAAAAGTGATAAGGGGAAGATATTGACACGTCAGAGGAATAAAG
AGAAAAACAGGGAGTCGACACCACTGGGGGTGGGACGACAAGAGAGAAAG
TGCGGAAGAAGAATAGGGAGGCTGTGTGTGATATGAAGGGATATTAATAT
TACATAATAAATAATTGGAAGCGTGGGTATGGATGTCGTTCTGCGAATGA
GAGGCGCTGGCCTCTCATAGCAAGCACGCCCCTCAACGCCATATTTAAGA
TTCAAAATTTATACTAAATGAACAAGTCATCATCCTTTCCGGCTGGGGTT
TTCAGCGTCATTCTTGTTTTCATCATCAGTGTTGCGGTCGATCGTCAGTG
AACCGACCGTCCCTTTCTCTTCCTCTCGTCGCGTCTCACGCTTGCGCATT
CGCCAGCCATCTACTCGTCTACTTGTCCCTCCCGATTTTTTTCTCCCGCC
CTTTGGACTCGTTCGACAGGCACACCGGCAGGCCATTAAATCTGTCCGAG
CTTTCTTCAACCCTCTCATTCTACTACTACACCACTACGACCACCACTGC
TGCTGCTGTTATAGCTGTTGTTGTTGTTACTGCTACTGCTGCTGTTACTA
CCGTTGCTACTACCGTGGTTTCCACATCTCTCGGGTCTTCACCACCAACT
CGCACTCTTAGCCCTGTTTCTATCTAACCCTCCCTCAATCCCTCCCTCCC
TCCCTCAA
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protein sequence of NO24G02220.1

>NO24G02220.1-protein ID=NO24G02220.1-protein|Name=NO24G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bp
MAHVFCATSRLIYPSRAPPGAFTLHFTLVLFYDTSVTSILIMLKPCNMFE
FFLTDRSYYLYIPPPHKLHSQQQKRLLSNKAYMRFNNIILVLPFVLAAGN
PFFASGQETTSSLRGTNNKDIASTTNDDDKQIDKLGTAETIPVVPVEEPV
PPMEPMKAEREMEGGQKENTMVEGHEGGREKGGMGHNSKGEVVDNKGMDD
DMITEGDNGLQFESAGPSEGDKGYYKGGWGRGGWGWRKKGGWNRNYNNNW
NNQRGWGRGGW*
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Synonyms
Publications