NO24G02100, NO24G02100 (gene) Nannochloropsis oceanica

Overview
NameNO24G02100
Unique NameNO24G02100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2648
Alignment locationchr24:559640..562287 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:559640..562287 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G02100.1NO24G02100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|652427gene_7433Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G02100.1NO24G02100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G02100 ID=NO24G02100|Name=NO24G02100|organism=Nannochloropsis oceanica|type=gene|length=2648bp
AGAAGGAGAGATGAGGTGCGCCATGTCGGACCTCAACTGCCAGGGCGCCG
CTGGTTTACGTTTCCCCTTGGAGAAAAAAAAGCGATACGGGCATTTGAAT
TTACACAGACGCAGGGTTCATACATTCACGCTCAACACACACGTTTGGAT
TCAAAATAATAGACATTATCCATACAACTTTTCATTGATAAGCCGACGCA
GCTTGCGTGGTAAATAATATCAGGAGGGCATGAAGCTCACTGTGGAATGG
TGGGCTGCCCTTTGATGATGTTTTGAAGACCAAACTGCGTCTTAGCAACC
AAATAGTTCCGATTGTTTGCTCGGTTTCTTGATGATGTATAGCTTGCTGA
GATTTCGTGCTTGGCTTTTGATTCCCTTCCGCGGCTGCGGAAGCTTGTAT
ATCTCCAGCACCACCTGTAGAACAGGTGCGTGCTCACATATTTGGATCAA
TATCAAGACCTTTGTAGGAAAGTTGTTGCTACTCAAGGAAGTCCTTCGTC
ATCTTCGTCAATCTTGATTAAGCGGATCTGTGGTGGCGAAGACGTCGAAA
GCAGAATAGAGTAATTACGGCCCAACAGTGACTACCTGGAGCAATGTAAT
CCAATCCCTTTCCTAGAGAATAACAGATGCAGATCCCCTTATTTTGTCCT
TGTGATAAATCTCTTGCTTTTACCTATGTATCACTTTCACTTCCTCGCAG
TCTTCTTGCTCTAACGAACCATCTACAGCTCTGTGGTGGCATTGCGGTGT
GGCTTGCCCAGTCTACGACCACGGCCGCTTTGACCCAATGGGCTTACATG
AAACCTTCCGTCGTGCACCACAGTTTTCTATGTAATATGAAAACTGTAGG
TGTGTCGTCTTGTGTGTCAAGCTTTTCTTCTTTGCTGATGACGTGGCGAG
CCTGTATGAGGGAGGAAAATTGTCGAATGACATCGTATTAAAGCACTCAA
CTTAAGCGAGACAAGAAGCACACCATGGCACACTCTTTTATGCGCCATTT
GTACTTTTTCAACATTAGAGGATGAAGAGAGGGTGAGGCAAAGAGAAATA
GATGGAGATAGATATAGATCGAAAGAGGTAGAAGTAGTGACGGAGAAAGA
AAAAGAGAGAAAGAGAAAGGAAAAGAGGGAGAGAGTGAGGGAGAGAGATG
GAGGAGAAAGGAAGACAGAGTGGGAGAGAGAGAAAGAGAAAGAGAAGAGA
AAGATGGAGGGGGCAAGAAAGAGAAAGAAAAAGAAATAGAATCGAGAGAG
TGAGAGAGAGAGTGTGAGGGAGAGAGAACACAGGTTGTGGATCCCGCGGC
ACGTAAAAGTGATGGATCATAGTCGTCATCGCCTTTCTTTCCATGTCCTC
CTTCCCAGAAAGAAACCCACTTAGTTTACAACCGATGCGCATTACACACA
GGAATAGCTAGACCTTGCGCGTGATCTCGTCGTAAAGGGCACTTCTGCAT
CCACCTTCGAGGTCGCCGCGCCGAGCAATATCCCTGGCCAATCAGTCGCA
CAAGGTAACCAAGTAAAACTTTCCCTAACCCTCCTCCTACAATGGCCGTT
CGCATCCGTGGTGGGGGCGCTCGTGTGCAACAAGGCAGGGATAGAAGAAA
GCGCCCGTGTCCCGCAGGCATCGCTTGTCGCTTTCAGCATGAGATGCAGg
taaggctggagttgtggtctactccattccttccctcttttccctaccca
tctttcccttggcttcttattcacagcactcacaaaccgcggaactcatt
cgctttccctcatccacagCATATAATGGAATTCACGCACGACAGGTCTA
CAATCGTCGGGGGAGGGGGCAGGCGCGGGAGAGGACGAGGACGATTGGGA
AGAGAGGGTAGAGGGGGAGGAGGACGAGAAGGAGGAAGTGGAAGAGGAGG
AGGGAGGACGGCATGGCATGGGCAAGGACATCGGTTGGGTGGTGGAATGA
ATGGAGCAGCAGAAGGAGAGGAAAACCCGAAGAGAAAGGGGGTGGAGGGA
GGGCGAGAGGGACGAGTGGAGGGAAGAAGACGAGGGTTTTTGGAGGCCCT
GGGCAGGCCTTTGGGGAAGGAGGGAAGGAGGAGGAAGAGGAGGAGGAGAT
ACAGGTGGTTGAAAGGCGGGAAGGAGGAAGTCGAGGGGGAGAAAGGGGGG
CAAGGGCAATGGAGGAGAATGTCGGACCTGAATTGATTGACGATGACAGC
GAGGAGGAGGAGGAGGAGGAGGAGAGGGAGGAGGGAATCGAGGTGATCGA
GGGCAAGAAAGATGGAGGAAATGAGGGAGGATTGAGTTGTCCGATTTGTG
GGGTAGAAGTTGGAGGGTGGGATGTGGGTATGGACAAACATTTGCGAGAG
AGGCATGAGATGACTTAGGGAGGGAGGGAGGGGGGAGGGAGGGAGGGAAG
GAAGGCGTTGTTTGTTTGTAAGATGCCAGTAGATTTGTACAGGAAGGGAG
GGACGCGAAGGAGGTAATGTAGGAGGGAAGAGGTAGATAAAGGGGAGGAG
AAGCCGGCAAGACCATCATTCACACCCTCGACCCCCCTTTCCTGGCTGGA
CCTGCATGATACTTAGCGTACGTATTAAGTCTGTTCCAAAGCTGAAAGCA
ACAATTGCAAACACACTGGCAGCAGCAGCAGCAGCAATGACAGTGGCG
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protein sequence of NO24G02100.1

>NO24G02100.1-protein ID=NO24G02100.1-protein|Name=NO24G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MAVRIRGGGARVQQGRDRRKRPCPAGIACRFQHEMQHIMEFTHDRSTIVG
GGGRRGRGRGRLGREGRGGGGREGGSGRGGGRTAWHGQGHRLGGGMNGAA
EGEENPKRKGVEGGREGRVEGRRRGFLEALGRPLGKEGRRRKRRRRYRWL
KGGKEEVEGEKGGQGQWRRMSDLN*
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Synonyms
Publications