NO24G01960, NO24G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01960 vs. NCBI_GenBank
Match: BAN20520.1 (diazepam binding inhibitor, putative [Riptortus pedestris]) HSP 1 Score: 98.2 bits (243), Expect = 1.500e-17 Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 0 Query: 5 LQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTY 92 L+QRF EAA+++ K K PSDEE L +YALFKQ+TVGD NT KPGLLD G+ K AW+K+KG K AAMEAYI +VE + Y Sbjct: 3 LEQRFNEAAEKV---KELTKRPSDEELLELYALFKQATVGDNNTSKPGLLDLKGKYKWEAWDKKKGLSKDAAMEAYITKVEELVGKY 86
BLAST of NO24G01960 vs. NCBI_GenBank
Match: AHJ25685.1 (acyl-CoA-binding protein [Macrobrachium nipponense]) HSP 1 Score: 98.2 bits (243), Expect = 1.500e-17 Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 0 Query: 5 LQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTY 92 L++RF EAA+++ K +K P+DEE L IYALFKQ TVGDCNT +PG++DF G+ K AW +KG K AAMEAYI + ++ I+TY Sbjct: 3 LEERFNEAAEKV---KNLSKKPNDEELLEIYALFKQGTVGDCNTERPGMMDFKGKAKWDAWNGKKGMTKDAAMEAYINKADQLIATY 86
BLAST of NO24G01960 vs. NCBI_GenBank
Match: AEP84099.1 (acyl-CoA-binding protein [Penaeus monodon]) HSP 1 Score: 96.7 bits (239), Expect = 4.300e-17 Identity = 47/91 (51.65%), Postives = 66/91 (72.53%), Query Frame = 0 Query: 5 LQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTYGTKA 96 L+++F +AA+++ K + P+D+E IY+LFKQ+TVGD NT +PG+LDF G+ K AW +KG K AAMEAY+A+ E+ ISTYG KA Sbjct: 3 LEEKFNKAAEQV---KNLQQQPTDDELKEIYSLFKQATVGDINTERPGMLDFKGKAKWDAWSSKKGMSKEAAMEAYVAKAEQLISTYGLKA 90
BLAST of NO24G01960 vs. NCBI_GenBank
Match: ACU82846.1 (acyl-CoA-binding protein [Fenneropenaeus chinensis]) HSP 1 Score: 95.5 bits (236), Expect = 9.500e-17 Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 0 Query: 5 LQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTYGTKA 96 L+++F +AA+++ K + P+D+E IY+L+KQ+TVGD NT +PG+LDF G+ K AW +KG K AAMEAY+A+ E+ ISTYG KA Sbjct: 3 LEEKFNKAAEQV---KNLQQQPTDDELKEIYSLYKQATVGDINTERPGMLDFKGKAKWDAWSSKKGMSKEAAMEAYVAKAEQLISTYGLKA 90
BLAST of NO24G01960 vs. NCBI_GenBank
Match: XP_003456254.1 (PREDICTED: acyl-CoA-binding protein isoform X2 [Oreochromis niloticus]) HSP 1 Score: 94.7 bits (234), Expect = 1.600e-16 Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 0 Query: 4 ELQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTYG 93 ELQ +F+EAA + K P+DEE L IY+LFKQ+TVGD NT +PG+ DFTG+ K AWEKQKGK K AM YI+ VE YG Sbjct: 3 ELQTKFDEAAAEV---KQLKAKPTDEEMLQIYSLFKQATVGDVNTSRPGMFDFTGKAKWDAWEKQKGKSKENAMNEYISLVEELKQKYG 88
BLAST of NO24G01960 vs. NCBI_GenBank
Match: XP_008612064.1 (diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) [Saprolegnia diclina VS20] >EQC34658.1 diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) [Saprolegnia diclina VS20]) HSP 1 Score: 94.0 bits (232), Expect = 2.800e-16 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 9 FEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTY 92 FE AA I W PA+ PS+++KL +YAL+KQ T GDCNT +PG+ D G+ K AW +KG K AA AY+AEV RQ+ TY Sbjct: 4 FEAAAAAIKNWNPAS-SPSNDDKLALYALYKQGTEGDCNTSRPGMFDLAGKAKWDAWNAKKGTSKEAAQAAYVAEVARQLETY 85
BLAST of NO24G01960 vs. NCBI_GenBank
Match: XP_012195026.1 (hypothetical protein SPRG_01419 [Saprolegnia parasitica CBS 223.65] >KDO34177.1 hypothetical protein SPRG_01419 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 93.6 bits (231), Expect = 3.600e-16 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 9 FEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTY 92 FE AA I W PA+ PS+++KL +YAL+KQ T GDCNT +PG+ D G+ K AW +KG K AA AY+AEV RQ+ TY Sbjct: 4 FEAAAAAIKNWSPAS-SPSNDDKLALYALYKQGTEGDCNTSRPGMFDLAGKAKWDAWNAKKGMSKEAAQAAYVAEVARQMETY 85
BLAST of NO24G01960 vs. NCBI_GenBank
Match: XP_024142125.1 (acyl-CoA-binding protein [Oryzias melastigma]) HSP 1 Score: 93.6 bits (231), Expect = 3.600e-16 Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0 Query: 4 ELQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTYG 93 ELQ +F+ AA + K P+DEE LL+Y+LFKQ++VGD NT +PG+LDFTG+ K AWEKQKGK K AM+ YI VE YG Sbjct: 3 ELQAQFDAAAAEV---KQLKAKPADEEMLLVYSLFKQASVGDVNTARPGMLDFTGKAKWDAWEKQKGKSKEDAMKEYIKLVEELKQKYG 88
BLAST of NO24G01960 vs. NCBI_GenBank
Match: OQS01437.1 (acyl-CoA-binding-like protein [Achlya hypogyna]) HSP 1 Score: 93.2 bits (230), Expect = 4.700e-16 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 9 FEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTY 92 FE AA I W PA+ PS+++KL +YAL+KQ T GDCNT +PG+ D G+ K AW +KG K AA AY+AEV RQ+ TY Sbjct: 4 FEAAAAAIKNWNPAS-SPSNDDKLALYALYKQGTEGDCNTSRPGMFDLAGKAKWDAWNAKKGMTKEAAQAAYVAEVARQMETY 85
BLAST of NO24G01960 vs. NCBI_GenBank
Match: XP_004572007.1 (acyl-CoA-binding protein [Maylandia zebra] >XP_005751636.1 PREDICTED: acyl-CoA-binding protein [Pundamilia nyererei] >XP_005943457.1 PREDICTED: acyl-CoA-binding protein-like [Haplochromis burtoni]) HSP 1 Score: 92.8 bits (229), Expect = 6.100e-16 Identity = 48/89 (53.93%), Postives = 58/89 (65.17%), Query Frame = 0 Query: 4 ELQQRFEEAAKRIAAWKPAAKDPSDEEKLLIYALFKQSTVGDCNTPKPGLLDFTGRRKHGAWEKQKGKDKIAAMEAYIAEVERQISTYG 93 ELQ +F+EAA + K P+DEE L IY+LFKQ+TVGD NT +PG+ DFTG+ K AWEKQKGK AM YI+ VE YG Sbjct: 3 ELQTKFDEAAAEV---KQLKAKPTDEEMLQIYSLFKQATVGDVNTARPGMFDFTGKAKWDAWEKQKGKSNENAMNEYISLVEELKQKYG 88 The following BLAST results are available for this feature:
BLAST of NO24G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01960 ID=NO24G01960|Name=NO24G01960|organism=Nannochloropsis oceanica|type=gene|length=613bpback to top protein sequence of NO24G01960.1 >NO24G01960.1-protein ID=NO24G01960.1-protein|Name=NO24G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=96bpback to top Synonyms
Publications
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