NO24G01880, NO24G01880 (gene) Nannochloropsis oceanica

Overview
NameNO24G01880
Unique NameNO24G01880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3579
Alignment locationchr24:499436..503014 -

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Properties
Property NameValue
DescriptionUbiquitin carboxyl-terminal hydrolase MINDY-1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:499436..503014 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:1990380Lys48-specific deubiquitinase activity
GO:1990380Lys48-specific deubiquitinase activity
GO:0004843thiol-dependent ubiquitin-specific protease activity
Vocabulary: INTERPRO
TermDefinition
IPR007518MINDY
IPR033979MINDY_domain
Vocabulary: Biological Process
TermDefinition
GO:0071108protein K48-linked deubiquitination
GO:0006508proteolysis
Homology
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_009034268.1 (hypothetical protein AURANDRAFT_11009, partial [Aureococcus anophagefferens] >EGB10673.1 hypothetical protein AURANDRAFT_11009, partial [Aureococcus anophagefferens])

HSP 1 Score: 164.9 bits (416), Expect = 6.900e-37
Identity = 114/341 (33.43%), Postives = 156/341 (45.75%), Query Frame = 0
Query:   18 FPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLFRPA 359
            FP K + F   GR VP+L QNE GPC LL+V N LLLQ  L++ P+   VSL D++  + +++LE  S AA               GGD       G A  +    V+E I LLP L  G+DVNVRF   + FE T  L +FD   + L HGW     D      +GG     +G  +YN+V+ ++V  + G  +                                                           + ++DFL R+  QLT  GL  LH  ++E +L  L+ + HFS + K  G +Y+LVTD GY+ EA +VW +LDGV G  E VDG FR A
Sbjct:   13 FPLKTVMF--LGRTVPVLGQNEFGPCALLSVVNALLLQNALELSPDLGSVSLADVVALVGDQILERNSKAA---------------GGD-------GEAALNTRRAVEEAIALLPTLAGGLDVNVRFAGDSLFEFTGCLGIFDLFDLALVHGWRADPSDP----ADGGAAHAALGAKSYNEVIARVVEGRAGNDD--------------------------------------------------------AEAAAMDDFLSRSATQLTYFGLVELHGRLKERQLAALYRNFHFSTIFKYEGHIYVLVTDVGYQHEASIVWEKLDGVDGDTEFVDGEFRVA 269          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: GBG25769.1 (Ubiquitin carboxyl-terminal hydrolase MINDY-1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 161.4 bits (407), Expect = 7.600e-36
Identity = 100/339 (29.50%), Postives = 159/339 (46.90%), Query Frame = 0
Query:   17 VFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            V   KR+ F    R V ++LQNE GPCPL+A+ N+LLL+  L +  +   +   +++  +AN ++E                              G  AD+++ + + E++ +LP L++G+DVNVRF  V+ FE    +++FD LG+ LFHGWVV ++D +        +   + N++YNQ M++++A +E G + +    E+                                                +   ++E FL  T  Q T   L+ LH TV+E E+C  F +NHFS L K  G LY LVTD+GY++   + W  L+ V G  ELV   F
Sbjct:   53 VHEVKRMAF--LNREVSVVLQNENGPCPLIALVNVLLLRGTLKMHKDRRSIGSENLIAMVANLLVEKN----------------------------GSGADENMQHTMQEMMDILPTLQYGLDVNVRFGGVSLFEFDNHVAIFDLLGVNLFHGWVVDQQDTE--------VYDAIANLSYNQAMDRIIAAREAGSDGQTSSEEL--------------------------------------------VQTLQEAEIIERFLSETASQFTFTALTQLHETVKEREVCVFFRNNHFSTLFKIEGHLYALVTDQGYRDNGMIGWELLNAVDGDTELVSPSF 309          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_002180379.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47787.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 156.4 bits (394), Expect = 2.400e-34
Identity = 122/396 (30.81%), Postives = 173/396 (43.69%), Query Frame = 0
Query:   34 ILLQNEAGPCPLLAVANILLLQRQLDVDPEYTK---VSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTD-VAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLFRPAVEGXXXXXXXXXXXEGRLGGCDHGHAAVGTAMARSLREQ-----EEAEARLIERVMAASLRDVSGQG 421
            ILLQNE GPCPLLA AN LLL+  +++     +    SL D+   +ANR ++   T                                  A+ VDE++H +P+L++GMDVN +FTD    +E T EL+ FD L +RL HGW+   E ++            VGN TYN+++E ++   E G E  + + EMD  + ++AS                                     AT+  SL+++FL  T  QLT  GL +LH  + E+EL   F +NH+  L K+ G LY+LVTD GY     +VW  LD + G  E  D  F+P               E  L       A    A+  S  +      +  E  L+     ASLRD  G G
Sbjct:   17 ILLQNENGPCPLLAAANALLLKGVIELPSHCVRNSVASLEDVANVLANRAMQNHQTE---------------------------------AHFVDELMHHIPKLQYGMDVNPKFTDGCTGYEYTSELTAFDMLRVRLVHGWLADPEHDE--------TYTAVGNKTYNELVEWIIKGNEAGTEVEKLQKEMDLLQVRQASLVAKDVSDESPQGTVEAAIVQEDMVKIQAKYDELSELATQG-SLMQNFLEATSHQLTQYGLHVLHEQIHEDELVVFFRNNHYGTLTKRNGMLYILVTDLGYCNAPAIVWEMLDVIDGDTEYADSDFKPPGAKAHLTSGPTLSPEQLLAQASQNDADYNLAVQLSKGDNGSISLDAQEGDLMAAATQASLRDYHGMG 370          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: ELT98155.1 (hypothetical protein CAPTEDRAFT_179036 [Capitella teleta])

HSP 1 Score: 152.9 bits (385), Expect = 2.700e-33
Identity = 114/354 (32.20%), Postives = 166/354 (46.89%), Query Frame = 0
Query:    4 TPRSAASASASPL--VFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            T   AA    SPL  V+  K I F  +  + PI+ QNE GPCPLLA+ N+L+LQ ++ + P      +I+I+T  + +++E           AD +   AP       K +   A  +    + + + +  +L+ G+DVNV+FT V+ FE T E  VFD LGI L+HGW+V  +   E           +GN  YNQ++EK++  K   RE                                                       TE+L + E+FL R+  QLT  GLS L +TV + +LC  F +NHFS L K+   L++LVTD+G+  E++VVW  L  V G G  VD  F
Sbjct:   16 TGAEAAGPEKSPLQSVYHIKWIYF--NESMYPIVTQNENGPCPLLAIMNLLVLQGKIKMPP------MIEIVT--SGQLME---------YLADCIFEHAP-------KDITEDARLNYEQNMHDAMAVFHKLQTGLDVNVKFTSVSTFEYTSECIVFDLLGIPLYHGWLVDPDSPSE--------VAAIGNCGYNQLVEKIITQKNSAREE----------------------------------------------------LVTEAL-IAEEFLNRSAAQLTYYGLSELSTTVNDGQLCVFFRNNHFSTLFKRKNELFILVTDQGFLTESNVVWETLSNVEGDGHFVDASF 282          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: EKC28191.1 (Protein FAM63B [Crassostrea gigas])

HSP 1 Score: 151.4 bits (381), Expect = 7.800e-33
Identity = 105/326 (32.21%), Postives = 155/326 (47.55%), Query Frame = 0
Query:   30 RLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            R VPI+ QNE GPCPLLA+ NILLL+ ++ ++P    ++   I+T + + +LE    A K  + A+ + FE                       + + + ++ +L+ G+DVNVRFT +  FE T E  +FD LGI L+HGW+V  +D            + VGN +YN ++EK+++      +R  ++ E+                                                    L E FL RT  QLT  GL  L+STV+EN+LC  F +NHFS L K    L++LVTD+G+  E +VVW  L+ V G G  VD  F
Sbjct:  177 RDVPIITQNENGPCPLLAIMNILLLKGKVKLEPGQEIITPEQIMTYLGDSILE---NAPKNNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLGIPLYHGWLVDPQDTK--------TVEAVGNCSYNLLVEKIIS------DRSSEQPEL-----------------------------------------------VNQALLAEAFLDRTASQLTYHGLYELNSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVVWETLNNVEGDGYFVDAQF 417          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_011440368.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X2 [Crassostrea gigas])

HSP 1 Score: 151.4 bits (381), Expect = 7.800e-33
Identity = 105/326 (32.21%), Postives = 155/326 (47.55%), Query Frame = 0
Query:   30 RLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            R VPI+ QNE GPCPLLA+ NILLL+ ++ ++P    ++   I+T + + +LE    A K  + A+ + FE                       + + + ++ +L+ G+DVNVRFT +  FE T E  +FD LGI L+HGW+V  +D            + VGN +YN ++EK+++      +R  ++ E+                                                    L E FL RT  QLT  GL  L+STV+EN+LC  F +NHFS L K    L++LVTD+G+  E +VVW  L+ V G G  VD  F
Sbjct:  177 RDVPIITQNENGPCPLLAIMNILLLKGKVKLEPGQEIITPEQIMTYLGDSILE---NAPKNNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLGIPLYHGWLVDPQDTK--------TVEAVGNCSYNLLVEKIIS------DRSSEQPEL-----------------------------------------------VNQALLAEAFLDRTASQLTYHGLYELNSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVVWETLNNVEGDGYFVDAQF 417          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_019926630.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1 [Crassostrea gigas])

HSP 1 Score: 151.4 bits (381), Expect = 7.800e-33
Identity = 105/326 (32.21%), Postives = 155/326 (47.55%), Query Frame = 0
Query:   30 RLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            R VPI+ QNE GPCPLLA+ NILLL+ ++ ++P    ++   I+T + + +LE    A K  + A+ + FE                       + + + ++ +L+ G+DVNVRFT +  FE T E  +FD LGI L+HGW+V  +D            + VGN +YN ++EK+++      +R  ++ E+                                                    L E FL RT  QLT  GL  L+STV+EN+LC  F +NHFS L K    L++LVTD+G+  E +VVW  L+ V G G  VD  F
Sbjct:  177 RDVPIITQNENGPCPLLAIMNILLLKGKVKLEPGQEIITPEQIMTYLGDSILE---NAPKNNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLGIPLYHGWLVDPQDTK--------TVEAVGNCSYNLLVEKIIS------DRSSEQPEL-----------------------------------------------VNQALLAEAFLDRTASQLTYHGLYELNSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVVWETLNNVEGDGYFVDAQF 417          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_021358443.1 (ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X2 [Mizuhopecten yessoensis] >OWF47944.1 Protein FAM63B [Mizuhopecten yessoensis])

HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32
Identity = 109/349 (31.23%), Postives = 162/349 (46.42%), Query Frame = 0
Query:    7 SAASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            SA+ +S    V+  K I +    + +P + QNE GPCPL+AV N+LLL+ Q+ + P    ++   ++T I N +LE    A K   T++AV                     +    + + + ++ +L+ G+DVNVRFT V  FE T E  +FD L I L+HGW+V  +++D        L   +G  +YNQ++EK+++ +                     SS K                                   TE+L L E FL     QLT  GL  L+S V+EN+LC  F +NHFS + +    L+LLVTD+G+  E +VVW  L  V G G  VD  F
Sbjct:  196 SASPSSTDGNVYHVKWIAY--KNKEIPTITQNENGPCPLIAVMNVLLLKCQVHLPPNTEVITPDQLMTYIGNCILE---NAPKTQDTSEAVQL-------------------NYQQNMHDAMAVIHKLQTGLDVNVRFTGVNDFEYTPECIIFDLLSIPLYHGWLVDPQEKD--------LITAIGTCSYNQLVEKIISQR---------------------SSDK-------------------------------PETVTEAL-LCESFLDGAAAQLTYHGLCELNSVVKENQLCVFFRNNHFSTMYRHQNELFLLVTDQGFLSERNVVWETLSNVEGDGYFVDANF 459          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_021358442.1 (ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1 [Mizuhopecten yessoensis])

HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32
Identity = 109/349 (31.23%), Postives = 162/349 (46.42%), Query Frame = 0
Query:    7 SAASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            SA+ +S    V+  K I +    + +P + QNE GPCPL+AV N+LLL+ Q+ + P    ++   ++T I N +LE    A K   T++AV                     +    + + + ++ +L+ G+DVNVRFT V  FE T E  +FD L I L+HGW+V  +++D        L   +G  +YNQ++EK+++ +                     SS K                                   TE+L L E FL     QLT  GL  L+S V+EN+LC  F +NHFS + +    L+LLVTD+G+  E +VVW  L  V G G  VD  F
Sbjct:  196 SASPSSTDGNVYHVKWIAY--KNKEIPTITQNENGPCPLIAVMNVLLLKCQVHLPPNTEVITPDQLMTYIGNCILE---NAPKTQDTSEAVQL-------------------NYQQNMHDAMAVIHKLQTGLDVNVRFTGVNDFEYTPECIIFDLLSIPLYHGWLVDPQEKD--------LITAIGTCSYNQLVEKIISQR---------------------SSDK-------------------------------PETVTEAL-LCESFLDGAAAQLTYHGLCELNSVVKENQLCVFFRNNHFSTMYRHQNELFLLVTDQGFLSERNVVWETLSNVEGDGYFVDANF 459          
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_022331966.1 (ubiquitin carboxyl-terminal hydrolase MINDY-2-like [Crassostrea virginica])

HSP 1 Score: 149.8 bits (377), Expect = 2.300e-32
Identity = 109/347 (31.41%), Postives = 162/347 (46.69%), Query Frame = 0
Query:    9 ASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356
            A  ++ P V+  K   F    R VP++ QNE GPCPLLA+ NILLL+ ++ ++P    ++   I+T + + +LE    A K  + A+ + FE                       + + + ++ +L+ G+DVNVRFT +  FE T E  +FD L I L+HGW+V  +D            + VGN +YNQ++EK++       +R  +K E+                                                    L E+FL RT  QLT  GL  L STV+EN+LC  F +NHFS L K    L++LVTD+G+  E +V+W  L+ V G G  VD  F
Sbjct:  150 ADENSEPSVYHIKWNTFDL--RDVPVITQNENGPCPLLAIMNILLLKGKVKLEPGLEIITPEQIMTYLGDCILE---NAPKVNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLRIPLYHGWLVDPQDSR--------TVEAVGNCSYNQLVEKIIG------DRSSEKEEL-----------------------------------------------VNQALLAENFLDRTASQLTYHGLYELQSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVMWETLNNVEGDGCFVDAQF 409          
The following BLAST results are available for this feature:
BLAST of NO24G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009034268.16.900e-3733.43hypothetical protein AURANDRAFT_11009, partial [Au... [more]
GBG25769.17.600e-3629.50Ubiquitin carboxyl-terminal hydrolase MINDY-1 [Aur... [more]
XP_002180379.12.400e-3430.81predicted protein [Phaeodactylum tricornutum CCAP ... [more]
ELT98155.12.700e-3332.20hypothetical protein CAPTEDRAFT_179036 [Capitella ... [more]
EKC28191.17.800e-3332.21Protein FAM63B [Crassostrea gigas][more]
XP_011440368.17.800e-3332.21PREDICTED: ubiquitin carboxyl-terminal hydrolase M... [more]
XP_019926630.17.800e-3332.21PREDICTED: ubiquitin carboxyl-terminal hydrolase M... [more]
XP_021358443.11.700e-3231.23ubiquitin carboxyl-terminal hydrolase MINDY-1-like... [more]
XP_021358442.11.700e-3231.23ubiquitin carboxyl-terminal hydrolase MINDY-1-like... [more]
XP_022331966.12.300e-3231.41ubiquitin carboxyl-terminal hydrolase MINDY-2-like... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01880.1NO24G01880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01880.1NO24G01880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01880 ID=NO24G01880|Name=NO24G01880|organism=Nannochloropsis oceanica|type=gene|length=3579bp
TCCCTCCCTCTCGACTCCCTCTCCTCGGCTCGTTCGCCCACCCATACGCC
TTCATCTTTCCGACCCTAATTTTATACAAATATATATAATAAATGACACA
TACTCGTATAGATATTCCTTTCCTCCCTCCCCTCCACTCTAAAAAGGCGT
CATTCCTCCTCCCCTCTCACCCCCTCCTCCCATCCCTCCACCTCCTATCC
CTGCAACCCCTATCCCTCCCCCCTACCCATCCCTCCTCCTCCTCCTAATC
CTCCTCCTAGAGGCGCTGCTGCTGTTCCTCCTCCCGCTCCCCCTCCTCCT
CCTCCTCCTCCCCAACCAAAAATAGCAGGCAGGCTCATCTGTATTAATCG
TTTCAAAATCGCCTTCCTTCCCCTCGTCACAGTCACCTCGAACATCTCCT
CCGCCTCCATCGAGAAATGGAAGATCCAATCCCCCGTCGATGTGGGGATG
ATCTTTATCTCCCTCGGTGGCATCGGCATCCCTCCCCTCCCCCTCCCCCT
CCGCCCCCTGAACGACGGAATATGAGCTCTTCTGTCGGGCCACTGTCAAG
CATAAGCCCGATCTCCTCTGCCGTCAGGGAGAGCCTTTTTGTCCCCTTCC
ATTCATACGCACCACTTGGGCCCTTCTTCGTAAATTCTACGAGCAACCGC
GCATTGTTCTTGTAGTTAAGAGTGCCTCCTCCTCCGCCTCCTCCTCCGCC
TCCTCCTCCGCCTCCTCCTCCAGGTGGAGAGCCACCACCACCACCGCCCA
CCCCCCCCGGGTTGTTGGTAGGTGGTCAGGCGAAACTTGAGCATGCAGTT
CTCGCCAAAGACGACGAAGTCAGGGTCACTCCTCTGATTGGTAGGGAAGG
CATTATTGCCCATATCGGAGAAGGATGATGTGGAAAAGGTTACGGAGGAG
GGGGAGGAAGAGGAGGAGGGGAAGGAGGAGGAGGAGGAAAAGGAGATACC
GCGTAGAGTAGAGGAATAGGTACAAGGGAGGGAGGAAAGGAAGCAGGTGG
CGCTGCTGTTCTTGTGGGTACTCGTACAGGGCTTCCGTTGCATCAGTACT
ATGTTTCGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGGGCTGCAGGAAG
CCGGAAGAATCGAGAATTTACAGTCTGGGCGCTGCTGCTGCTCCTGGTGC
CGCTACGGAGAAGAAGCATGGTGCTGCCTGTAACAATTTGTGGTGATCGT
AAGGTAGTGGGGAAAAAGCGTGTGACCGCCGTGACGCTGCATCGCTGAAT
CGTTTGGCCGGGACACTGAGACGTGCTGTGATAGCGTGCGGCAGCATGCT
TCTGCCTTTGTCCTAACTACCATGTATAGATTCAGTAATACTGCACCCCT
GAGCTGGCCGACACTGCATTTTAATTAAATAGCTTCGCTTTGCAGGTGGG
GAGGTTGTCGTCGCTTCTCCCAATGGGATCAGTCACGACAAGTTCTATAA
TTTCACCCTAGACGACACTGTCCAAAAAGTCACCAAGCGACTTGCAGATC
AAAAAAGGATAGGACTGCTAGTAAGTCTGGTGCTTGCTTGCTTGGCTGTG
TATGGCATGATTATTATTATCATTATGAAATTACTTTTTTCGATTTTTCT
GTAAGATCGATAGCGACCCTTGTTAAGCCTCTTGACATGTCAAAATATTT
CATATTTCATGGCGTCGTCTAAACCCATTGACATGTCTGAAAAGGAAGTG
AGGATCGTTGGGACAGGGCTCTAAATTCAATCAACCTCTCCTCGTTGCCT
TGCCTCATCATCAGGGGGGATTCCTTGTCATCATAATTGCATCTACACGT
ACCCACGTACAATTACAGGACCAAATGTTGTTGACCCCTCGCTCCGCCGC
CTCCGCCTCCGCCTCCCCTCTCGTCTTCCCCACAAAACGTATTCCCTTTG
GTCCCCACGGCCGGCTTGTCCCTATCCTCTTGCAAAACGAGGCCGGGCCG
TGCCCATTGCTTGCCGTGGCCAACATTCTCCTCCTTCAACGGCAGCTGGA
CGTGGACCCGGAGTACACAAAGGTGTCTCTGATTGACATACTGACGGGCA
TTGCAAATCGTGTCTTGGAGGCTACCTCGACCGCTGCGAAAGCGGCCAGT
ACTGCTGATGCCGTTGCCTTTGAGGCTCCTGGGGGTGGCGACGAGATTGC
AAAGGCTGTCGGGGGACATGCCGATAAGgtgagttatgcggtaacgcttc
tcgatactctgtctatctcacacaaacaacaagagtcaatcctcgctcga
ctgcatcctgttctcattcacctcatcctccctccctcgctccctccctc
cctctcctccctgcagCATGTTGCTTATCAAGTCGACGAGGTCATTCACC
TTCTTCCTCGCTTGCGACATGGTATGGACGTAAACGTCCGTTTCACTGAC
GTAGCTGCGTTCGAGCCAACAGTGGAGCTTTCTGTCTTCGATGCCCTAGG
GATCCGACTATTCCATGGGTGGGTGGTAGGGGAAGAGGACGAGGACGAGG
AAGGGAGGGAGGGAGGGGTCTTGGCGCAGGTGGTGGGGAACATGACTTAC
AACCAGGTCATGGAGAAGTTGGTGGCAATGAAGGAGGGAGGGAGGGAGAG
AAGGAGGCAGAAGGGCGAGATGGATCGGGGTGAGGGCAAAAGGGCATCAA
GTCAGAAACTACCTTCCCTCCGCTCCTCCTCCTCCATCTCCTCCTCCTCC
TCCAGTTCCTCCTCCTCCTTCTCCTCCAGCACCTCATTCTCCCTCCCTGT
ATCCTCTGGGGCCACTGAATCTCTCTCCCTCCTCGAGGACTTCCTCCTTC
GCACCCCCGGGCAGCTCACCCTCCGGGGACTCTCCCTCCTCCACTCTACC
GTCAGAGAAAACGAGCTCTGCGGCCTCTTTCATCACAACCACTTCTCGGT
CCTGTTGAAGAAAGGGGGTAGGTTGTACTTATTGGTCACAGATGAAGGGT
ACAAAGAGGAGGCTCATGTGGTGTGGGCGAGGTTGGACGGCGTCTCTGGC
GCCGGAGAGCTCGTAGACGGTTTGTTCAGACCGGCGGTTGAAGGGGGAGG
GGCAGGAGGAGGAGGAGGAGGGGGTGTAGAAGGTAGGCTTGGTGGTTGTG
ATCATGGCCATGCTGCCGTTGGGACGGCGATGGCCAGATCTCTGAGGGAG
CAGGAGGAGGCAGAGGCGCGGTTGATAGAACGAGTCATGGCGGCCTCCTT
GCGCGATGTCAGTGGACAAGGCAGGGAAGTAGACGAAACAGGGGGGATAA
GAGAGGAGTTTAAGGAGGAAATGAGGAGGAACGACGAGGAATTTTGCCTT
GACCGGGTGTATTCGGAAGCGGAGCTGGCGGAGATGCGAGAGCTTGAAAG
AGATTTTCAATATGCCAGGCTTCAGGAAAAAGAAAGTAGGCACGGGCCGA
GAGGAAGGACAGAAGGAAGTCAGCAACTAGTTGGAAGACGGGTGGCGAGT
CGGGGCAGGGGGATGGGGGAGAGGGGTGGGAAAAAGGGAAAAAAAGACAC
TTGTACACTGCAATAACATTCAAAAGTCCACACCACGATTAACAATGAAG
TGAATAAAAAGTATCAAAGTTCTTTTGGG
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protein sequence of NO24G01880.1

>NO24G01880.1-protein ID=NO24G01880.1-protein|Name=NO24G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp
MLLTPRSAASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVAN
ILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFE
APGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAF
EPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVM
EKLVAMKEGGRERRRQKGEMDRGEGKRASSQKLPSLRSSSSISSSSSSSS
SSFSSSTSFSLPVSSGATESLSLLEDFLLRTPGQLTLRGLSLLHSTVREN
ELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGEL
VDGLFRPAVEGGGAGGGGGGGVEGRLGGCDHGHAAVGTAMARSLREQEEA
EARLIERVMAASLRDVSGQGREVDETGGIREEFKEEMRRNDEEFCLDRVY
SEAELAEMRELERDFQYARLQEKESRHGPRGRTEGSQQLVGRRVASRGRG
MGERGGKKGKKDTCTLQ*
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Synonyms
Publications