NO24G01870, NO24G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_024375330.1 (protein TRANSPARENT TESTA 9-like isoform X1 [Physcomitrella patens] >PNR54125.1 hypothetical protein PHYPA_007801 [Physcomitrella patens]) HSP 1 Score: 114.0 bits (284), Expect = 1.300e-21 Identity = 72/253 (28.46%), Postives = 132/253 (52.17%), Query Frame = 0 Query: 15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKR---ACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFVM 263 +V+ + + +LL++G+ D F+FF +K ++ TF ++ + R P VA Q +Q+LS+++ N + + ++YL S IN + F D EE+ Y LRTI+M++ T F+ + + + PLY A++ H E MVR A RT+ LS+Y V++ +R+F+T+ A F E+ + L++ A + L ++K + + +E + +I D L + D+ + L + HI V+ Sbjct: 36 LVETIRSMAELLIWGD-QHDPTFFDFFMEKQVMATFVRILKANRKSPTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINHLITFPYDFRHEELLAYYIIFLRTISMKLDRNTVSFFI--KTDNEEVVSFPLYTEAIKLFHHEESMVRIAVRTITLSVYNVDDESIRMFVTNPAVVH-YFSELVIFLRKQSYALDALVAEVSKLPDSGHMQGRLEGAVAEIGDLLYYCNDIINSGVPALKSIMTKHIMNVLVL 284
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_022588336.1 (hypothetical protein cyc_03003 [Cyclospora cayetanensis] >OEH75543.1 hypothetical protein cyc_03003 [Cyclospora cayetanensis]) HSP 1 Score: 113.6 bits (283), Expect = 1.700e-21 Identity = 70/246 (28.46%), Postives = 129/246 (52.44%), Query Frame = 0 Query: 16 VKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260 ++ + I ++L++GE + F+ F ++++L F Q+A P V Q +Q+LS+++ + ++ ++Y+ S N IN L D + EE+ Y + +++++M + P T LFL+ R H PLY A++F + M+RT R V L+L+RV++ +R FL + F + L+ N F LT G TA A+++ L+I++ L ++QD+ + +E LA + H Sbjct: 52 IETLRQIAEVLVWGE-QHNRGYFDIFCEQNVLSYFVQLAERPTVPNAVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFEDEEVASWYISFIKSLSMLVNPATIKLFLNERAK-----HFPLYSEAVKFFIAKDSMIRTHCRNVTLTLFRVKDPAIRAFL---VERPIFFSHVACYLREVLNRQFSRLTANGATAPD-LAIQDGALEIEEMLFYIQDIFSLNVEEFSELLAARLLIH 287
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_013336134.1 (hypothetical protein, conserved [Eimeria maxima] >CDJ59486.1 hypothetical protein, conserved [Eimeria maxima]) HSP 1 Score: 110.5 bits (275), Expect = 1.400e-20 Identity = 66/247 (26.72%), Postives = 131/247 (53.04%), Query Frame = 0 Query: 16 VKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQR-TAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260 ++ + + ++L++GE + F+ F ++++L F Q+A +P V Q +Q+LS+++ + ++ ++Y+ S N IN L D D EE+ Y + ++++++ + P T LFL+ R H P+Y +++F + MVRT +R V LSL+RV++ +R FL + F + L+ +GL L LT R +++ +L+I++ L ++QD+ + ++ LA + H Sbjct: 52 IETLRQVAEVLVWGEH-NNRGYFDTFCEQNVLSYFVQLAEQPNVPNTVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFDDEEVASWYVSFIKSLSLLVNPDTIKLFLNERAK-----HFPIYSESVKFFRAKDSMVRTHSRNVTLSLFRVQDPSLRSFL---LERPIFFSHVACYLRELLDGLLLRLTATRAPPPDRDRGIQDAVLEIEEMLFYIQDMFNLGIEQFSDLLAARLLVH 289
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_024399128.1 (protein TRANSPARENT TESTA 9-like isoform X1 [Physcomitrella patens] >PNR37577.1 hypothetical protein PHYPA_020686 [Physcomitrella patens]) HSP 1 Score: 110.5 bits (275), Expect = 1.400e-20 Identity = 70/253 (27.67%), Postives = 133/253 (52.57%), Query Frame = 0 Query: 15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAR--EPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKR---ACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFVM 263 +V+ + + +LL++G+ D F+FF +K ++ TF ++ + VA Q +Q+LS+++ N + + ++YL S IN + F + EE+ Y LRTI+M++ T F+ + + + + PLY A++F H E MVR A RT+ LS+YRV++ +R F+T+ F ++ + L++ A +GL ++K + + R +E + +I D L + D+ + L + +I V+ Sbjct: 36 LVETIRSMAELLIWGD-QHDPAFFDFFMEKQVMATFVRILKSSSKTTTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINYLITFPFNFQNEELLAYYIIFLRTISMKLDRNTVSFFI--KTNNEEVVSFPLYTEAIKFFHHEEGMVRIAVRTITLSVYRVDDESIRTFVTNPPIVD-YFSDLIVFLRKQSHALDGLVTEVSKYPDSGQLRGRLEGAIAEIGDLLYYCNDIINSNVPALKSIMTKNIMNSLVL 284
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_013247896.1 (hypothetical protein, conserved [Eimeria acervulina] >CDI82872.1 hypothetical protein, conserved [Eimeria acervulina]) HSP 1 Score: 110.2 bits (274), Expect = 1.900e-20 Identity = 69/258 (26.74%), Postives = 133/258 (51.55%), Query Frame = 0 Query: 10 YDAAE------VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260 YDA + ++ + + ++L++GE + F+ F ++++L F Q+A +P V Q +Q+LS+++ + ++ ++Y+ S N IN L D D EE+ Y + ++++++ + P T LFL+ R H P+Y +++F + MVRT R V LS++RV++ +R FL + F + L+ +G L LT A V++ +L+I++ L ++QD+ + +E LA + H Sbjct: 40 YDAVDERNRDFTIETLRQVAEVLVWGEN-NNRGYFDIFCEQNVLSYFVQLAEQPTIPNAVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFDDEEVASWYVSFIKSLSLLVNPDTIKLFLNDRAK-----HFPIYSESVKFFRAKDSMVRTHTRNVTLSIFRVQDLSLRAFL---IERPIFFSHVACYLRELLDGQLLRLT-ANRGASPICGVQDGVLEIEEMLFYIQDIFSLGVEEFSELLAARLLVH 287
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_024399130.1 (protein TRANSPARENT TESTA 9-like isoform X2 [Physcomitrella patens] >XP_024399131.1 protein TRANSPARENT TESTA 9-like isoform X2 [Physcomitrella patens] >XP_024399132.1 protein TRANSPARENT TESTA 9-like isoform X2 [Physcomitrella patens]) HSP 1 Score: 108.6 bits (270), Expect = 5.500e-20 Identity = 69/246 (28.05%), Postives = 129/246 (52.44%), Query Frame = 0 Query: 22 ITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAR--EPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKR---ACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFVM 263 + +LL++G+ D F+FF +K ++ TF ++ + VA Q +Q+LS+++ N + + ++YL S IN + F + EE+ Y LRTI+M++ T F+ + + + + PLY A++F H E MVR A RT+ LS+YRV++ +R F+T+ F ++ + L++ A +GL ++K + + R +E + +I D L + D+ + L + +I V+ Sbjct: 1 MAELLIWGD-QHDPAFFDFFMEKQVMATFVRILKSSSKTTTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINYLITFPFNFQNEELLAYYIIFLRTISMKLDRNTVSFFI--KTNNEEVVSFPLYTEAIKFFHHEEGMVRIAVRTITLSVYRVDDESIRTFVTNPPIVD-YFSDLIVFLRKQSHALDGLVTEVSKYPDSGQLRGRLEGAIAEIGDLLYYCNDIINSNVPALKSIMTKNIMNSLVL 242
BLAST of NO24G01870 vs. NCBI_GenBank
Match: CBN75744.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.5 bits (267), Expect = 1.200e-19 Identity = 71/253 (28.06%), Postives = 132/253 (52.17%), Query Frame = 0 Query: 15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFL-----FFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTK--KGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHF 261 +++++ I++L+ +GE + FEFF +K + F + R P V Q +Q +S+L N + L+ LLS + IN + ++ +D EE Y LL+ IA+R++ T P FL+ K + PLY R++ + H + MVRT+A ++ L ++ V++ + FLT E + F +++ ++ A + + + + + ++ + TA++ QD L +VQD+ L+E LA H+ HF Sbjct: 46 LIEVLRSISELVAFGEAGEGPEYFEFFCEKSTMALFVKALR-LGPAVKTQVVQGVSVLFQNLRSPTSLYMLLSSDHINRLMQPEGGAAELPLDDEEFLTNYIALLKAIAIRLSKETVPFFLNTTKGS-----FPLYSRSIPLIGHPDPMVRTSALSIALQVFSVKDPGVTAFLTREENHIGFFDQLSRLMQDAYSQVLCRMWQDVEPSSSGETTAIDGATSFFQDMLYYVQDVLSVGDSLLSEKLAQHLHRHF 292
BLAST of NO24G01870 vs. NCBI_GenBank
Match: CDJ49733.1 (hypothetical protein, conserved [Eimeria brunetti]) HSP 1 Score: 105.1 bits (261), Expect = 6.000e-19 Identity = 67/259 (25.87%), Postives = 135/259 (52.12%), Query Frame = 0 Query: 10 YDAAE------VVKIVHLITQLLLYGEGLQDER-MFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260 YDA + ++ + + ++L++GE Q+ R F+ F ++++L F Q+A + V Q +Q+LS+++ + ++ ++Y+ S N IN L D + EE+ Y + ++++++ + P T LFL+ R H P+Y +++F + MVRT +R V LSL+RV++ +R FL + F + L+ +G + LT A +++ +L++++ L +VQD+ + ++ LA + H Sbjct: 40 YDAIDERNGDFTIETLRQVAEVLVWGE--QNNRGYFDIFCEQNVLSYFVQLAEQSTVPNAVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFEDEEVASWYVSFIKSLSLLVNPDTIKLFLNERAK-----HFPIYSESVKFFRAKDSMVRTHSRNVTLSLFRVQDPSLRAFL---IERPIFFSHVACYLRELVDGQLIRLT-ASRGASPENGIQDGVLEVEEMLFYVQDIFSLGVEEFSDLLAARLMVH 287
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_635998.1 (armadillo-like helical domain-containing protein [Dictyostelium discoideum AX4] >Q54GS1.1 RecName: Full=Protein CLEC16A homolog >EAL62484.1 armadillo-like helical domain-containing protein [Dictyostelium discoideum AX4]) HSP 1 Score: 104.8 bits (260), Expect = 7.900e-19 Identity = 62/248 (25.00%), Postives = 135/248 (54.44%), Query Frame = 0 Query: 15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQ-MAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFV 262 +V+ + I +++++G+ D F+FF +K+++ F Q +A++ V Q +Q+LS+L+ N + ++ +++LLS N IN+ + D EE+ D + +LL+ +++++ T F +H + PLY A++F+ H E M+R A RT+ L++++VE +MR ++ + ++ F I ++R C L L K + + +++ + ++ D+ ++ D+ +N LA ++ + Sbjct: 40 IVESLRQIAEVMIWGD-QHDNLFFDFFLEKNIMGFFIQFLAQKTSTEVTIQLLQTLSILVENLRNENSIYFLLSNNYINEIIIHKFDFSSEEVLDYFVSLLKALSLKLDKSTVNFFFNHVEK-----DFPLYTEAIKFVNHKETMIRIAIRTLTLNIFKVENKEMREYIIN-STAVPYFSNIVWFIRRNCMSLSKVLEKSNHDSSYQ--LKDYMDELTDQFYYLHDIFNLGFESMNIVLAEQFIQYLI 278
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_020607380.1 (protein CLEC16A-like [Orbicella faveolata]) HSP 1 Score: 104.4 bits (259), Expect = 1.000e-18 Identity = 55/173 (31.79%), Postives = 99/173 (57.23%), Query Frame = 0 Query: 15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEAS 188 +V+ + I ++L++G+ D R+F+FF +K +L+ F +M + + Q +Q+LS+L N + + L+YLLS N +N + D EE+ Y + L+T+++++ T F + K+ PLY A++F HSE MVR A RT+ L++YRV + +M F+ + + Sbjct: 46 LVETLRSIAEILIWGD-QNDSRVFDFFLEKSMLMYFLKMMSQKSNQICVQLLQTLSILFENIRNETSLYYLLSNNSVNSIIIHKFDFSDEEVLAYYISFLKTLSLKLNRHTVHFFFNEHKN-----DFPLYTEAIKFFNHSESMVRIAVRTLTLNVYRVGDKNMLSFIRDKTA 212 The following BLAST results are available for this feature:
BLAST of NO24G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01870 ID=NO24G01870|Name=NO24G01870|organism=Nannochloropsis oceanica|type=gene|length=3104bpback to top protein sequence of NO24G01870.1 >NO24G01870.1-protein ID=NO24G01870.1-protein|Name=NO24G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bpback to top Synonyms
Publications
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