NO24G01430, NO24G01430 (gene) Nannochloropsis oceanica

Overview
NameNO24G01430
Unique NameNO24G01430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length939
Alignment locationchr24:383972..384910 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:383972..384910 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_005855590.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20782.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 447.6 bits (1150), Expect = 3.200e-122
Identity = 226/312 (72.44%), Postives = 272/312 (87.18%), Query Frame = 0 
Query:    1 MLKVFLFGLLLALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLADDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYG-LPANRENNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLLLSAF 312
            MLK+FL GLLL+L P++LN+A+RR YP PP+GG+A+V+SGASTGIGYDAAVHLADDFVV+AGVRKEKDAE LR++GK TLVPV+LDV  Q+S+DEAY KITAD  +RGIP+W +VNNAGIMT STVE HDVA M++IY+VNVWGVLRLTQKFLPL+RAQ+GRI+QISSI GFLTIPRAS Y SSKHALESLSD LR+EL  +NVSVTVVQPGAV+SAIF+KS+ A++ KLAEDPREL+VYG +      +SI+  A TP+CTT+AIR ALM  YPKTREVVANI+G+PAI ++Y+K  LPDR+LD++LLS F
Sbjct:    1 MLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLADDFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMIKEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKMLLSTF 312
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: EWM24343.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 447.6 bits (1150), Expect = 3.200e-122
Identity = 226/312 (72.44%), Postives = 272/312 (87.18%), Query Frame = 0 
Query:    1 MLKVFLFGLLLALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLADDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYG-LPANRENNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLLLSAF 312
            MLK+FL GLLL+L P++LN+A+RR YP PP+GG+A+V+SGASTGIGYDAAVHLADDFVV+AGVRKEKDAE LR++GK TLVPV+LDV  Q+S+DEAY KITAD  +RGIP+W +VNNAGIMT STVE HDVA M++IY+VNVWGVLRLTQKFLPL+RAQ+GRI+QISSI GFLTIPRAS Y SSKHALESLSD LR+EL  +NVSVTVVQPGAV+SAIF+KS+ A++ KLAEDPREL+VYG +      +SI+  A TP+CTT+AIR ALM  YPKTREVVANI+G+PAI ++Y+K  LPDR+LD++LLS F
Sbjct:   93 MLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLADDFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMIKEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKMLLSTF 404
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: EWM25314.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 231.9 bits (590), Expect = 2.800e-57
Identity = 133/317 (41.96%), Postives = 196/317 (61.83%), Query Frame = 0 
Query:    1 MLKVFLFGLLLALAPIILN-----FATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLA-DDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYGLPANRE----NNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLL 308
            +L+    GLL A    I++     F  R+ +P+PP GG AIVI+GASTGIG  AA HLA   ++V+  VRK  D EA++ALG P L P+++DVA+ +S++   E I A++ K  IP+  +VNNAG+     +EFH +  ++ +++++V G L LTQ+ LP IRA  GRI+ +SSI   + +P  +AY +SK A+E +SD LR EL  F+ SV++VQP  V +AIF K  ++  TK+   P  +  YG     E    + + V+ A+ P  TT AI HAL + YP TR +VAN++G+PA    +L    PDRL D ++
Sbjct:   11 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGG-AIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIM 326
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_005855521.1 (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20840.1 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 224.9 bits (572), Expect = 3.400e-55
Identity = 127/298 (42.62%), Postives = 187/298 (62.75%), Query Frame = 0 
Query:    1 MLKVFLFGLLLALAPIILN-----FATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLA-DDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYGLPANRE----NNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPA 289
            +L+    GLL A    I++     F  R+ +P+PP GG AIVI+GASTGIG  AA HLA   ++V+  VRK  D EA++ALG P L P+++DVA+ +S++   E I A++ K  IP+  +VNNAG+     +EFH +  ++ +++++V G L LTQ+ LP IRA  GRI+ +SSI   + +P  +AY +SK A+E +SD LR EL  F+ SV++VQP  V +AIF K  ++  TK+   P  +  YG     E    + + V+ A+ P  TT AI HAL + YP TR +VAN++G+PA
Sbjct:   19 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGG-AIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPA 315
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_005854162.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU22195.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EWM23126.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 223.4 bits (568), Expect = 9.800e-55
Identity = 136/315 (43.17%), Postives = 198/315 (62.86%), Query Frame = 0 
Query:    1 MLKVFLFGLLLALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLA---DDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELD-KFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYGLPANRENNSIVEAAA-----TPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQL 307
            +L   L+G++ AL P  + F TR+++P+   G  AI+++GASTGIG  AA+HLA    D  V+AGVRK+ DAE ++AL    L+P+ +D   Q S+D A     A +    +PI  ++NNAG+ T S +EF  +AK++++ E NV G   LTQ+ +P +RA  GR++QISS++G +T+    AY +SKHA E+LSD LR+EL   F VSV+VV+P  V++ IF K ++  +T L+ + R L  YG    RE+ +  + A      +P  T+ AI HAL A+YPKTR VVAN  GV A +  ++   LPDRL D L
Sbjct:    5 ILAFALWGVIFALVPFAVEFLTRKSFPVHTTG--AILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAA----VAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSL--YGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWL 311
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_005853543.1 (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22812.1 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 208.4 bits (529), Expect = 3.300e-50
Identity = 135/311 (43.41%), Postives = 194/311 (62.38%), Query Frame = 0 
Query:   11 LALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLA-DDFVVFAGVRKEKDAEALRALGKPTL------VPVLLDVAKQESVDEAYEKITADVKK-RGIPIWAIVNNAGI-MTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAED---PRELEVYG--LPANRENNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLL 308
            LA  P +L+ ATRR YP+PP  G A+V++GASTGIG  AA  LA   F+VFAGVRKE D E L+A   PTL      VP++LDV KQE +D+A + +++ +    G P+  +VNNAG+  +   VEF  +  ++ +++VN +G +  T+ FL L+RA  GR+I ISS+ G    P  + Y +SK ALE+ SDALR+E+ +  VSV+VV+P  V SAIF   K AT+ K   D    + +EVYG  +         +E A+ P  T+ AI HAL A++P+TR VVAN++G+ A V  ++     DR+ D+L+
Sbjct:   14 LASIPYLLDLATRREYPVPPPEG-AVVVTGASTGIGAHAAHSLARAGFLVFAGVRKELDGETLKA-EAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIF--GKIATRVKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: EWM21817.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 204.9 bits (520), Expect = 3.600e-49
Identity = 134/311 (43.09%), Postives = 193/311 (62.06%), Query Frame = 0 
Query:   11 LALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLA-DDFVVFAGVRKEKDAEALRALGKPTL------VPVLLDVAKQESVDEAYEKITADVKK-RGIPIWAIVNNAGI-MTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAED---PRELEVYG--LPANRENNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLL 308
            LA  P +L+ ATRR YP+PP  G A+V++GASTGIG  AA  LA   F+VFAGVRKE D E L+A   PTL      VP++LDV KQE +D+A + +++ +    G P+  +VNNAG+  +   VEF  +  ++ +++VN +G +  T+ FL L+RA  GR+I ISS+ G    P  + Y +SK ALE+ SDALR+E+ +  VSV+VV+P  V SAIF   K AT+ K   D    + +EVYG  +         +E A+ P  T+ AI  AL A++P+TR VVAN++G+ A V  ++     DR+ D+L+
Sbjct:   14 LASIPYLLDLATRREYPVPPPEG-AVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKA-EAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIF--GKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 198.4 bits (503), Expect = 3.400e-47
Identity = 123/306 (40.20%), Postives = 190/306 (62.09%), Query Frame = 0 
Query:    6 LFGLLLALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAAVHLA-DDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSK-EATKTK-LAEDPRELEVYGLPANRENNSIVEAAAT-PECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLL 308
            L G+L  L  ++  F   + +P+  +G  AI+I+G STGIG  AAV LA   + V+A VRK+ D ++L+  G  TL+P+++DV K + +  A + I    KK G  +  +VNNAGI     +E HD+ +++ ++EVNV+GV+ +TQ FLP+IR   GRI+ + S+ GF+ +P +++YS++K  LE L+DALR E+  F VSV++V+P  V +AI  KS  EA  T+ ++ + ++   +      E     EA A  PE TT+AI HAL +  P+TR +VAN  G+PA ++  +   LPDRL D +L
Sbjct:    9 LMGILAVLLYLLFVFPV-KYFPVHDSG--AILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTI----KKGGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFADFEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVL 307
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_001747089.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88013.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 193.0 bits (489), Expect = 1.400e-45
Identity = 112/276 (40.58%), Postives = 169/276 (61.23%), Query Frame = 0 
Query:   36 IVISGASTGIGYDAAVHLAD-DFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKITADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYG---LPANRENNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLL 308
            ++++GAS+GIG  AA+ LA   + V+  VRKE+DA  +R LG  TL P+++DV   E +  A E I+    K   P+ A+VNNAGI + + +E +D+ +++  +EVN++G++  TQ FLPL+RA  GRII I S+ G + +  ++ YS +K ALE +SD+LR EL    VSV++V+P  VK+ I  KS  A   +       LEVY      A+ +     E A TPECTT AI  A+ +  P+TR VVAN + +PA ++  +   LPDR +D ++
Sbjct:   35 VLVTGASSGIGRHAAIELAKLGYEVYGTVRKERDANDIRGLGIKTLHPIIMDVTNSEQIKNAVETIS----KLDQPLIALVNNAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELFPLGVSVSLVEPAYVKTEIVHKSSGAQSAEHWASKEMLEVYDHFFSVADEKRQRAFEHADTPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVDAIM 306
[Close]
BLAST of NO24G01430 vs. NCBI_GenBank
Match: XP_005855962.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20405.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 190.3 bits (482), Expect = 9.200e-45
Identity = 133/347 (38.33%), Postives = 196/347 (56.48%), Query Frame = 0 
Query:    6 LFGLLLA---------LAPIILNFATRRAYPIPPAGGS-----AIVISGASTGIGYDAAVHLA-DDFVVFAGVRKEKDAEAL---------------RALGKPT------LVPVLLDVAKQESVDEAYEKITADVKKR-GIPIWAIVNNAGIMTGS-TVEFHDVAKMKEIYEVNVWGVLRLTQKFLPLIR-AQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELDKFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELE-VYG-LPANRENNSIVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPDRLLDQLLLSAF 312
            L+G+LLA         L P+++   +R+ YP      S      ++++GASTGIG  AA +LA   F+VFAGVRK  D EAL               R+ GK +      L  ++LD+ K   +  A   +  ++ +R G+P   +VNNAG+  G+  VEF  +   +  +EVN +G L +TQ FLPL+R A  GRII +SS+ G +T P  + YS +K ALE+LSD LR+EL    VSV+V+QPG ++S IF K+ E  + ++ E P E   +YG L    + N+++  A+ P   +RAI HAL + YPKTR +V N+NG PA    +    L DRL+D+++   F
Sbjct:   10 LYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGVLHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPEECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDRMITPPF 356
The following BLAST results are available for this feature:
BLAST of NO24G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855590.13.200e-12272.44short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM24343.13.200e-12272.44short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM25314.12.800e-5741.96short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005855521.13.400e-5542.621-acylglycerone phosphate reductase, partial [Nann... [more]
XP_005854162.19.800e-5543.17short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005853543.13.300e-5043.413-hydroxybutyrate dehydrogenase [Nannochloropsis g... [more]
EWM21817.13.600e-4943.09short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_004990606.13.400e-4740.20oxidoreductase [Salpingoeca rosetta] >EGD77262.1 o... [more]
XP_001747089.11.400e-4540.58hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_005855962.19.200e-4538.33short-chain dehydrogenase reductase sdr [Nannochlo... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002851NSK002851Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01430.1NO24G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598477gene_7367Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100105g17gene6128Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01430.1NO24G01430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01430 ID=NO24G01430|Name=NO24G01430|organism=Nannochloropsis oceanica|type=gene|length=939bp
ATGTTAAAGGTCTTCCTCTTCGGGCTCCTCTTAGCCCTGGCGCCAATAAT
TCTGAATTTTGCGACCCGCCGGGCCTATCCAATCCCGCCCGCAGGCGGCA
GCGCCATCGTCATCTCCGGTGCTTCCACAGGCATCGGTTACGACGCTGCT
GTCCACTTAGCCGACGACTTTGTAGTTTTTGCTGGCGTGCGGAAAGAAAA
AGACGCCGAGGCTCTCCGGGCATTGGGCAAGCCGACTCTCGTGCCGGTGC
TCCTGGACGTGGCCAAGCAGGAATCCGTAGACGAGGCGTACGAGAAAATC
ACGGCCGACGTCAAGAAACGCGGTATCCCCATCTGGGCCATTGTCAACAA
TGCAGGGATTATGACGGGCTCGACGGTAGAATTCCATGACGTGGCCAAGA
TGAAAGAGATCTACGAGGTGAACGTGTGGGGCGTCTTGAGGCTTACGCAG
AAGTTTCTACCATTGATTCGAGCGCAATCGGGACGCATTATCCAAATCTC
TTCCATAGTCGGCTTCCTCACAATCCCGCGCGCCTCTGCGTATAGCTCCA
GTAAACATGCCTTGGAATCGTTGAGCGATGCCCTGCGAATGGAGCTCGAT
AAATTCAATGTCTCTGTCACTGTGGTCCAACCAGGTGCCGTAAAGAGCGC
CATATTTGACAAGAGCAAGGAGGCGACCAAAACTAAGTTAGCCGAAGACC
CTCGCGAGCTCGAAGTATACGGGCTTCCGGCTAATAGGGAAAATAATTCG
ATTGTCGAGGCGGCTGCTACGCCTGAGTGTACCACGAGGGCGATCCGACA
TGCGCTCATGGCCGAGTACCCCAAGACGCGCGAGGTGGTCGCGAATATCA
ATGGAGTCCCAGCGATAGTGTCGTACTATCTGAAGCTGACATTGCCTGAT
CGATTATTGGATCAGTTATTATTATCAGCGTTCACGTAA
back to top

protein sequence of NO24G01430.1

>NO24G01430.1-protein ID=NO24G01430.1-protein|Name=NO24G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=313bp
MLKVFLFGLLLALAPIILNFATRRAYPIPPAGGSAIVISGASTGIGYDAA
VHLADDFVVFAGVRKEKDAEALRALGKPTLVPVLLDVAKQESVDEAYEKI
TADVKKRGIPIWAIVNNAGIMTGSTVEFHDVAKMKEIYEVNVWGVLRLTQ
KFLPLIRAQSGRIIQISSIVGFLTIPRASAYSSSKHALESLSDALRMELD
KFNVSVTVVQPGAVKSAIFDKSKEATKTKLAEDPRELEVYGLPANRENNS
IVEAAATPECTTRAIRHALMAEYPKTREVVANINGVPAIVSYYLKLTLPD
RLLDQLLLSAFT*
back to top
Synonyms
Publications