NO24G01370, NO24G01370 (gene) Nannochloropsis oceanica

Overview
NameNO24G01370
Unique NameNO24G01370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2085
Alignment locationchr24:369890..371974 +

Link to JBrowse

Properties
Property NameValue
Descriptionubiquitin-specific protease 26
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:369890..371974 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0016787hydrolase activity
GO:0008233peptidase activity
GO:0004843thiol-dependent ubiquitin-specific protease activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR028889USP_dom
IPR001394Peptidase_C19_UCH
Homology
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_018845678.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Juglans regia] >XP_018845679.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Juglans regia] >XP_018845680.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Juglans regia] >XP_018845681.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Juglans regia] >XP_018845682.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Juglans regia])

HSP 1 Score: 116.7 bits (291), Expect = 2.300e-22
Identity = 94/319 (29.47%), Postives = 125/319 (39.18%), Query Frame = 0 
Query:   25 DYRA--TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLP---------------PSSSSWTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXGE------------AEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGGR 305
            D RA  TP GLTNLGATCY N +LQ ++ NK FR+ ++   P                   L +L R+FA +H       +    V+ L LD G QQD  EF  L ++ +E C G    S   T                   V+ L RGR+ +VTTC  C     AS   E F ELEL++  L                   + +  A C  R       +L  L   L+   +                      GE             E +YDL  ++ HKG + + GHY A  +D  TG+WW FDD  V   GR
Sbjct:   98 DLRASKTPAGLTNLGATCYANSILQCLYMNKPFREGIFSLEP-----------DVLRQNPVLDQLARLFAQLHASRMAFIDSSPIVKTLELDNGVQQDSHEFLTLLLSLLERCLGHSKVSKART------------------IVQDLFRGRVSHVTTCSQCGKESEASSNMEDFYELELNVKGLKNLDESLDDYLSVEELQGDNQYFCASCNTRVDATRSIKLRSLPAVLNF-QLKRCVFLPKTTMKKKITSAFCFPGELDMRQRLSEPSRLELIYDLSAVLIHKGTAVNSGHYVAHIKDEDTGQWWEFDDEHVSNLGR 386
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_018845683.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X2 [Juglans regia])

HSP 1 Score: 116.7 bits (291), Expect = 2.300e-22
Identity = 94/319 (29.47%), Postives = 125/319 (39.18%), Query Frame = 0 
Query:   25 DYRA--TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLP---------------PSSSSWTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXGE------------AEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGGR 305
            D RA  TP GLTNLGATCY N +LQ ++ NK FR+ ++   P                   L +L R+FA +H       +    V+ L LD G QQD  EF  L ++ +E C G    S   T                   V+ L RGR+ +VTTC  C     AS   E F ELEL++  L                   + +  A C  R       +L  L   L+   +                      GE             E +YDL  ++ HKG + + GHY A  +D  TG+WW FDD  V   GR
Sbjct:   98 DLRASKTPAGLTNLGATCYANSILQCLYMNKPFREGIFSLEP-----------DVLRQNPVLDQLARLFAQLHASRMAFIDSSPIVKTLELDNGVQQDSHEFLTLLLSLLERCLGHSKVSKART------------------IVQDLFRGRVSHVTTCSQCGKESEASSNMEDFYELELNVKGLKNLDESLDDYLSVEELQGDNQYFCASCNTRVDATRSIKLRSLPAVLNF-QLKRCVFLPKTTMKKKITSAFCFPGELDMRQRLSEPSRLELIYDLSAVLIHKGTAVNSGHYVAHIKDEDTGQWWEFDDEHVSNLGR 386
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: EEF42135.1 (ubiquitin specific protease, putative [Ricinus communis])

HSP 1 Score: 115.5 bits (288), Expect = 5.200e-22
Identity = 91/312 (29.17%), Postives = 123/312 (39.42%), Query Frame = 0 
Query:   29 TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXG------------EAEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            +P GLTNLGATCY N +LQ ++ N SFR+ ++   P                   L EL R+FA +H G     +   F++ L LD G QQD  EF  L ++ +E C      S + T                   V+ L RG + +VTTC  C     AS + E F ELEL++  L     S               +    C  R       +L  L D L+                          G            E E +YDL  ++ HKG + + GHYTA  +D  TG+WW FDD  V   G
Sbjct:  105 SPAGLTNLGATCYANSILQYLYMNTSFREGLFGVEP-----------ELLKRQPVLDELARLFAKLHAGKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLLSLLERCLSHSEVSKVRT------------------IVQDLFRGSVSHVTTCSKCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLSVEELHGENQYFCELCKMRVDANRSIKLRTLPDVLNFQLKRCVFLPKKTTTRKKITSAFAFPGVLDMQKRLSEPSEMEWIYDLSAVLIHKGTAVNSGHYTAHIKDEHTGQWWEFDDEHVSNLG 387
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_015575388.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Ricinus communis] >XP_015575389.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Ricinus communis])

HSP 1 Score: 115.5 bits (288), Expect = 5.200e-22
Identity = 91/312 (29.17%), Postives = 123/312 (39.42%), Query Frame = 0 
Query:   29 TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXG------------EAEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            +P GLTNLGATCY N +LQ ++ N SFR+ ++   P                   L EL R+FA +H G     +   F++ L LD G QQD  EF  L ++ +E C      S + T                   V+ L RG + +VTTC  C     AS + E F ELEL++  L     S               +    C  R       +L  L D L+                          G            E E +YDL  ++ HKG + + GHYTA  +D  TG+WW FDD  V   G
Sbjct:  105 SPAGLTNLGATCYANSILQYLYMNTSFREGLFGVEP-----------ELLKRQPVLDELARLFAKLHAGKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLLSLLERCLSHSEVSKVRT------------------IVQDLFRGSVSHVTTCSKCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLSVEELHGENQYFCELCKMRVDANRSIKLRTLPDVLNFQLKRCVFLPKKTTTRKKITSAFAFPGVLDMQKRLSEPSEMEWIYDLSAVLIHKGTAVNSGHYTAHIKDEHTGQWWEFDDEHVSNLG 387
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_002520349.2 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X2 [Ricinus communis])

HSP 1 Score: 115.5 bits (288), Expect = 5.200e-22
Identity = 91/312 (29.17%), Postives = 123/312 (39.42%), Query Frame = 0 
Query:   29 TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXG------------EAEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            +P GLTNLGATCY N +LQ ++ N SFR+ ++   P                   L EL R+FA +H G     +   F++ L LD G QQD  EF  L ++ +E C      S + T                   V+ L RG + +VTTC  C     AS + E F ELEL++  L     S               +    C  R       +L  L D L+                          G            E E +YDL  ++ HKG + + GHYTA  +D  TG+WW FDD  V   G
Sbjct:  105 SPAGLTNLGATCYANSILQYLYMNTSFREGLFGVEP-----------ELLKRQPVLDELARLFAKLHAGKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLLSLLERCLSHSEVSKVRT------------------IVQDLFRGSVSHVTTCSKCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLSVEELHGENQYFCELCKMRVDANRSIKLRTLPDVLNFQLKRCVFLPKKTTTRKKITSAFAFPGVLDMQKRLSEPSEMEWIYDLSAVLIHKGTAVNSGHYTAHIKDEHTGQWWEFDDEHVSNLG 387
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_022729113.1 (ubiquitin carboxyl-terminal hydrolase 26 [Durio zibethinus])

HSP 1 Score: 114.8 bits (286), Expect = 8.800e-22
Identity = 91/312 (29.17%), Postives = 123/312 (39.42%), Query Frame = 0 
Query:   29 TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXGE------------AEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            +P GLTNLGATCY N +LQ ++ NKSFR+ V+   P                   L +L R+FA +H       +   F++ L LD G QQD  EF  L  + +E C      S   T                   V+ L RG + +VTTC  C     AS + E F ELEL++  L     S               +    C  R       +L  L D L+   +                      GE             E +YDL  ++ HKG +A+ GHY A  +D +TG+WW FDD  V   G
Sbjct:  105 SPAGLTNLGATCYANSILQCLYMNKSFRQGVFSVEP-----------DVLKQHPVLDQLARLFAQLHASKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLFSLLERCLSHSKVSKART------------------IVQDLFRGSVSHVTTCSKCGQDSEASSKMEDFYELELNVKGLKTLEESLNDYLSVEELHGDNQYFCESCNTRVDASRSIKLRTLPDVLNF-QLKRYDFLQKTTTKKKITSVFSFLGELDMRGRLSEPSQVELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVSNLG 386
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: POF16930.1 (ubiquitin carboxyl-terminal hydrolase 26 [Quercus suber])

HSP 1 Score: 114.8 bits (286), Expect = 8.800e-22
Identity = 95/318 (29.87%), Postives = 124/318 (38.99%), Query Frame = 0 
Query:   25 DYRA--TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXGE------------AEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            D RA  TP GLTNLGATCY N +LQ +  NKSFR  ++   P                   L +L R+FA +H       +   FV+ L LD G QQD  EF  L +  +E C      S   T                   V+ L RGR+ +VTTC  C     AS   E F ELEL++  L     S               +    C  R       +L  L D L+   +                      GE            +E +YDL  ++ HKG + + GHY A  +D  TG+WW FDD +V   G
Sbjct:  130 DLRASDTPVGLTNLGATCYANSILQCLHMNKSFRGGIFSLEP-----------DVLRQNPVLDQLARLFAKLHTSRMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLCLLERCLSNSKVSKART------------------IVQDLFRGRVSHVTTCSQCGKDSEASSNMEDFYELELNVKGLKTLDESLDDYLSVEELHGDNQYFCESCKTRVDATRSIKLRALPDVLNF-QLKRCVFLPKTTMKKKITSAFCFPGELDMRQRLSEPSQSELIYDLSAVLIHKGTAVNSGHYVAHIKDEDTGQWWEFDDEQVSNLG 417
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_023907565.1 (ubiquitin carboxyl-terminal hydrolase 26 [Quercus suber])

HSP 1 Score: 114.8 bits (286), Expect = 8.800e-22
Identity = 95/318 (29.87%), Postives = 124/318 (38.99%), Query Frame = 0 
Query:   25 DYRA--TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDMGAIXXXXXXXXXXXXXXXXXXXXXXGE------------AEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            D RA  TP GLTNLGATCY N +LQ +  NKSFR  ++   P                   L +L R+FA +H       +   FV+ L LD G QQD  EF  L +  +E C      S   T                   V+ L RGR+ +VTTC  C     AS   E F ELEL++  L     S               +    C  R       +L  L D L+   +                      GE            +E +YDL  ++ HKG + + GHY A  +D  TG+WW FDD +V   G
Sbjct:   98 DLRASDTPVGLTNLGATCYANSILQCLHMNKSFRGGIFSLEP-----------DVLRQNPVLDQLARLFAKLHTSRMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLCLLERCLSNSKVSKART------------------IVQDLFRGRVSHVTTCSQCGKDSEASSNMEDFYELELNVKGLKTLDESLDDYLSVEELHGDNQYFCESCKTRVDATRSIKLRALPDVLNF-QLKRCVFLPKTTMKKKITSAFCFPGELDMRQRLSEPSQSELIYDLSAVLIHKGTAVNSGHYVAHIKDEDTGQWWEFDDEQVSNLG 385
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_015575390.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X3 [Ricinus communis])

HSP 1 Score: 114.0 bits (284), Expect = 1.500e-21
Identity = 90/311 (28.94%), Postives = 122/311 (39.23%), Query Frame = 0 
Query:   29 TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDM-----------GAIXXXXXXXXXXXXXXXXXXXXXXGEAEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            +P GLTNLGATCY N +LQ ++ N SFR+ ++   P                   L EL R+FA +H G     +   F++ L LD G QQD  EF  L ++ +E C      S + T                   V+ L RG + +VTTC  C     AS + E F ELEL++  L     S               +    C  R       +L  L D L+                                      E E +YDL  ++ HKG + + GHYTA  +D  TG+WW FDD  V   G
Sbjct:  105 SPAGLTNLGATCYANSILQYLYMNTSFREGLFGVEP-----------ELLKRQPVLDELARLFAKLHAGKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLLSLLERCLSHSEVSKVRT------------------IVQDLFRGSVSHVTTCSKCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLSVEELHGENQYFCELCKMRVDANRSIKLRTLPDVLNFQLKRCVFLPKTTTRKKITSAFAFPGVLDMQKRLSEPSEMEWIYDLSAVLIHKGTAVNSGHYTAHIKDEHTGQWWEFDDEHVSNLG 386
[Close]
BLAST of NO24G01370 vs. NCBI_GenBank
Match: XP_015575391.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X4 [Ricinus communis])

HSP 1 Score: 114.0 bits (284), Expect = 1.500e-21
Identity = 90/311 (28.94%), Postives = 122/311 (39.23%), Query Frame = 0 
Query:   29 TPTGLTNLGATCYLNVLLQAMFFNKSFRKAVYEFRPXXXXXXXXXXXXXXXXXXXLQELQRVFAHMHLGMARNYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLASSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCC---QTASRRKESFDELELSLSSLPPSSSS---------------WTIAGCIAR-------ELVQLDDTLDM-----------GAIXXXXXXXXXXXXXXXXXXXXXXGEAEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVKEGG 304
            +P GLTNLGATCY N +LQ ++ N SFR+ ++   P                   L EL R+FA +H G     +   F++ L LD G QQD  EF  L ++ +E C      S + T                   V+ L RG + +VTTC  C     AS + E F ELEL++  L     S               +    C  R       +L  L D L+                                      E E +YDL  ++ HKG + + GHYTA  +D  TG+WW FDD  V   G
Sbjct:  105 SPAGLTNLGATCYANSILQYLYMNTSFREGLFGVEP-----------ELLKRQPVLDELARLFAKLHAGKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLLSLLERCLSHSEVSKVRT------------------IVQDLFRGSVSHVTTCSKCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLSVEELHGENQYFCELCKMRVDANRSIKLRTLPDVLNFQLKRCVFLPKTTTRKKITSAFAFPGVLDMQKRLSEPSEMEWIYDLSAVLIHKGTAVNSGHYTAHIKDEHTGQWWEFDDEHVSNLG 386
The following BLAST results are available for this feature:
BLAST of NO24G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_018845678.12.300e-2229.47PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]
XP_018845683.12.300e-2229.47PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]
EEF42135.15.200e-2229.17ubiquitin specific protease, putative [Ricinus com... [more]
XP_015575388.15.200e-2229.17PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]
XP_002520349.25.200e-2229.17PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]
XP_022729113.18.800e-2229.17ubiquitin carboxyl-terminal hydrolase 26 [Durio zi... [more]
POF16930.18.800e-2229.87ubiquitin carboxyl-terminal hydrolase 26 [Quercus ... [more]
XP_023907565.18.800e-2229.87ubiquitin carboxyl-terminal hydrolase 26 [Quercus ... [more]
XP_015575390.11.500e-2128.94PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]
XP_015575391.11.500e-2128.94PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01370.1NO24G01370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01370.1NO24G01370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01370 ID=NO24G01370|Name=NO24G01370|organism=Nannochloropsis oceanica|type=gene|length=2085bp
ATGGCGGTCGTTCCTTTCCTCCCTCCCCCTCCTTCCTCATCCGCAGCAAC
AGCAGCAGCAGCAGCAGCAACAGATTACCGCGCCACCCCCACGGGCCTGA
CAAATCTAGGAGCCACCTGTTACTTGAATGTCCTCCTCCAAGCCATGTTC
TTCAACAAGAGTTTTCGGAAGGCTGTTTACGAATTCCGCCCTCCGTCCTC
CTCCTCCTCTTCCGCGGGAGGCAGCAAGGGGGAAAGGATGGTAGTGATCT
TGCAGGAGCTACAGCGGGTGTTTGCACATATGCATTTGGGGATGGCCCGG
AACTACAATCCTCACGAGTTTGTGAGACTGCTGCATCTGGACAGGGGGGA
GCAGCAGGATCCTCAGGAGTTCCATCGGCTTTTCATGAACAAGATTGAAG
AGTGCTTCGGTGCCTTATCGCCGTCTTCTATAGGTACCACCTCCCTCGCT
TCCTCGACCTCGGGGGAGGGAGGGTCAAGGGGATTGGCAGGAACGGTGAG
GGGGCTGCACAGGGGGAGATTAAAGTATGTGACCACGTGTCAGTGCTGTC
AGACAGCCTCAAGACGGAAGGAAAGCTTCGATGAACTTGAATTGAGCCTG
TCATCCCTCCCGCCCTCCTCCTCGTCCTGGACGATTGCTGGGTGTATAGC
GCGgtacttggcgcccgagcgcttggagggggaaaatcaatacatgtgcg
gtcaatgccatgataaacgggatgctgagcgaagaattgatttgacggag
ctcccgccggtgttgaacgtgcatcttcttcgatacgtgtatgtgggggg
gagaagaaaaaggtcagGGAGCTGGTACAGCTGGACGACACCCTGGATAT
GGGTGCTATTGCTGCTGCTGCTGCTACTACTGCTGCTGCTGGTGGTGGGG
CTGCAGAGGGAGGAGGGGGAGGCGAAGGAGAAGCCGAAGgtacgcattat
ttcttttttttctgcactaaatgtgcatgttgcgatgcgtttatgggggc
gtttgggggggaaggcactcggtagttaaggagctggtgattatttcttg
aagtaatcatgcgtcaatattcatagtgtatccgtttttgtctaattctt
actcctctgtcatgtatttatacatttcattacttcgatgcatctattca
ttcattcatttgtttatcactatgtatacacagGGCTCTACGACCTGATG
GGCATCATGTATCACAAGGGCGGCTCGGCCTCTCACGGTCACTACACGGC
CGAGTACCGCGACAGCTCTACCGGACGATGGTGGCATTTTGATGACACGG
AAGTGAAGGAGGGAGGACGAGGAGGGGGAAGGGAAAGAGGGCAAGGGGGA
GGACGAGGAGGAGAAGAAAAGAATGAAGTTAGGGGGAGGATGTCTGTGGA
GAAGAAGGGGGAGAGGGAGGGTAGGAATGAGGCGAGGGAGGATGTTATTC
ATTTGGTGTCAGAGGATGAGGGGGGAGATGACAGGGATAGAGAGAAGGTG
GAGGAGGAGGAGGAGGGAAAGGAAGAGAGAGACGAGTACGATTATGATGA
CGGCAGGGAAGGGATGAAGGAGACCCTCATCAACAAGGCTAACGGTACAG
CAGCAGCAGCGGCAGCAACAGCACGAGGAGGAGAAGTGGGAGGAAGGGGA
GGGGGAGTTAGGAAAGCGGGATCTGCGGATGCATACTGTCTTATCTATGT
GAGGAGAGGATGGGAGGGACCGGGGGAGGACGTGTTGGAGTCGTTGCTGC
CCCAAGAAGTAGTTGCGGAGGTGGAGGAGGCGAATCAGAAACTGGTGAGA
ATGCGGGAGAGGTACCAAGAGAGGAAGACTAGAATGGAGGAGGAGATGAA
GGCTCGGAGGAAGGTGTATGAGGAGTTGTTCTTGGAGGGCGGAAAGGAGG
GCGGAAAGGAGGGCGGGAAGGAAGGGCCGGTGTCGTTGACGGGGGAAGAG
GGGGAGGCCTTTCATTGGGTCCCAACGGTGTGGCTGAAAGGATGGGTGAC
GGGTGTGGGGCAGGAGGAGGAGGAGGGAGAGCGGGGGAGGCTTGGAGGGA
GGGAAGGAAGGAAGGAGGAGGGGAGAGGGAGATAA
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protein sequence of NO24G01370.1

>NO24G01370.1-protein ID=NO24G01370.1-protein|Name=NO24G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=559bp
MAVVPFLPPPPSSSAATAAAAAATDYRATPTGLTNLGATCYLNVLLQAMF
FNKSFRKAVYEFRPPSSSSSSAGGSKGERMVVILQELQRVFAHMHLGMAR
NYNPHEFVRLLHLDRGEQQDPQEFHRLFMNKIEECFGALSPSSIGTTSLA
SSTSGEGGSRGLAGTVRGLHRGRLKYVTTCQCCQTASRRKESFDELELSL
SSLPPSSSSWTIAGCIARELVQLDDTLDMGAIAAAAATTAAAGGGAAEGG
GGGEGEAEGLYDLMGIMYHKGGSASHGHYTAEYRDSSTGRWWHFDDTEVK
EGGRGGGRERGQGGGRGGEEKNEVRGRMSVEKKGEREGRNEAREDVIHLV
SEDEGGDDRDREKVEEEEEGKEERDEYDYDDGREGMKETLINKANGTAAA
AAATARGGEVGGRGGGVRKAGSADAYCLIYVRRGWEGPGEDVLESLLPQE
VVAEVEEANQKLVRMRERYQERKTRMEEEMKARRKVYEELFLEGGKEGGK
EGGKEGPVSLTGEEGEAFHWVPTVWLKGWVTGVGQEEEEGERGRLGGREG
RKEEGRGR*
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