NO24G01290, NO24G01290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01290 vs. NCBI_GenBank
Match: EWM24344.1 (microsomal signal peptidase 23 kd [Nannochloropsis gaditana]) HSP 1 Score: 290.4 bits (742), Expect = 3.700e-75 Identity = 139/154 (90.26%), Postives = 149/154 (96.75%), Query Frame = 0 Query: 22 LSLLTAFSTYGHRDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSGLTNSTILPDQYT 176 L +LTAFSTYGH DYG+V+QL++NKLIQLRRVRDNGQTGYHYDQALFNFDLKADL+PAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRI+E KEDA+L+L+AEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRS L NSTILPDQYT Sbjct: 50 LLVLTAFSTYGHGDYGSVQQLNVNKLIQLRRVRDNGQTGYHYDQALFNFDLKADLSPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIIERKEDAVLNLKAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSDLVNSTILPDQYT 203
BLAST of NO24G01290 vs. NCBI_GenBank
Match: XP_002293942.1 (hypothetical protein THAPSDRAFT_9852 [Thalassiosira pseudonana CCMP1335] >EED88951.1 hypothetical protein THAPSDRAFT_9852 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.8 bits (403), Expect = 7.500e-36 Identity = 90/182 (49.45%), Postives = 117/182 (64.29%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGH--RDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDA---ILDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFM---RSGLTNSTILPDQY 175 MHT WVRLNAVVFFG TVLLCLS+L A S GH R + +L++N LR V+++G D+AL +FDL AD+ PAF WNIKQ+FV++V Y++ N +QVV+WDRI+E+ A IL + F+ Y L D ELR K + L L+WDHMPLTGTL+M G + LP +Y Sbjct: 1 MHTVWVRLNAVVFFGLTVLLCLSILAALSKIGHTRRYQPKIHKLALN---NLRSVKNHGGV----DRALLSFDLHADMNPAFHWNIKQIFVYVVATYKTDTNPKNQVVLWDRIIEASSPASSKILKEDNVFVKYGLIDQGNELRGKEVELSLMWDHMPLTGTLYMGQQAEGTASKFTLPAEY 175
BLAST of NO24G01290 vs. NCBI_GenBank
Match: XP_009032338.1 (hypothetical protein AURANDRAFT_18385 [Aureococcus anophagefferens] >EGB12684.1 hypothetical protein AURANDRAFT_18385 [Aureococcus anophagefferens]) HSP 1 Score: 155.6 bits (392), Expect = 1.400e-34 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGHRDY-------GTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSGLTNSTILPDQY 175 MHT+WVRLNAV F+G VLL LS+ FS + V+ + +N+L+ LR +G D+AL +FDL+ADLTPAF WN+KQLFVF++ EY ++ NVL+QV++WD+IV S+E+A LD ++ Y L D ELRN ++ LVWDHMP+TG LFM ++++LP +Y Sbjct: 1 MHTYWVRLNAVFFYGLNVLLGLSVAAWFSCLQQDLHFKTELPRPVVETVRVNELLSLRA---HGGV----DRALLSFDLQADLTPAFHWNLKQLFVFVLAEYYTESNVLNQVILWDKIVTSEEEARLDERNVYVKYALIDQTNELRNTSVNYLLVWDHMPVTGRLFMERETGSTSMLPKEY 174
BLAST of NO24G01290 vs. NCBI_GenBank
Match: GAX13201.1 (signal peptidase complex subunit 3 [Fistulifera solaris]) HSP 1 Score: 151.8 bits (382), Expect = 2.000e-33 Identity = 88/178 (49.44%), Postives = 116/178 (65.17%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGHRDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDP-AVELRNKNITLRLVWDHMPLTGTLFM-RSGLTNST--ILPDQY 175 MHT WVRLNAVVFFG TVLL LS + A S GH T++Q + K +++R+ R G D+AL +FDL DLTPAF WNIKQLFV++V YE+ +QVV+WD+IVE+ + +L + F+ YPL D ELR K +TL+L WDHMP+TG L M + L S+ +LP +Y Sbjct: 1 MHTVWVRLNAVVFFGLTVLLGLSCMAALSKVGH----TLRQRPVVKKLEMRKFRSLKSHG-GVDRALLSFDLDVDLTPAFHWNIKQLFVYVVAIYETNGR-YNQVVLWDKIVEAGDSKVLKEKNTFIKYPLVDKRGGELRGKEVTLQLQWDHMPITGLLHMDKQPLDTSSKFVLPTEY 172
BLAST of NO24G01290 vs. NCBI_GenBank
Match: GAX22639.1 (signal peptidase complex subunit 3 [Fistulifera solaris]) HSP 1 Score: 150.6 bits (379), Expect = 4.500e-33 Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGHRDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDP-AVELRNKNITLRLVWDHMPLTGTLFM-RSGLTNST--ILPDQY 175 MHT WVRLNAVVFFG TVLL LS + A S GH T++Q + K +++R+ R G D+AL +FDL DLTPAF WNIKQLFV++V YE+ +QVV+WD+IVE+ + +L + F+ YPL D ELR K +TL+L WDHMP+TG L M + L S+ LP +Y Sbjct: 1 MHTVWVRLNAVVFFGLTVLLGLSCMAALSKVGH----TLRQRPVVKKLEMRKFRSLKSHG-GVDRALLSFDLDVDLTPAFHWNIKQLFVYVVAIYETNGR-YNQVVLWDKIVEAGDSKVLKEKNTFIKYPLVDKRGGELRGKEVTLQLQWDHMPITGLLHMDKQPLDTSSKFFLPTEY 172
BLAST of NO24G01290 vs. NCBI_GenBank
Match: XP_002186347.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65817.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 149.4 bits (376), Expect = 1.000e-32 Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGH--RDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSGLTNSTI---LPDQY 175 MHT WVRLNAVVFFG T LL S L A S GH R V+ L +N LR ++ +G YD+AL +FDL DL PAF WNIKQLFV++V YE++ +Q+V+WD+IVE+ ++ ++D + F+ Y L D + +LR K++TL+L WDHMP+TG L+M S LP +Y Sbjct: 1 MHTVWVRLNAVVFFGLTALLGFSCLAALSKLGHSLRHKPVVEVLKLN---TLRSLKSHG----GYDRALLSFDLMVDLAPAFHWNIKQLFVYVVAIYETEGR-NNQIVLWDKIVEADDEKVIDEKNVFVKYALSDQSDQLRGKDVTLQLQWDHMPITGLLYMDGQAVESASKFRLPAEY 171
BLAST of NO24G01290 vs. NCBI_GenBank
Match: XP_005852747.1 (signal peptidase complex subunit 3, partial [Nannochloropsis gaditana CCMP526] >XP_005855581.1 signal peptidase complex subunit 3, partial [Nannochloropsis gaditana CCMP526] >EKU20773.1 signal peptidase complex subunit 3, partial [Nannochloropsis gaditana CCMP526] >EKU23083.1 signal peptidase complex subunit 3, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 144.8 bits (364), Expect = 2.500e-31 Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0 Query: 101 VLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSGLTNSTILPDQYT 176 VLSQVVVWDRI+E KEDA+L+LEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRS L NSTILPDQYT Sbjct: 74 VLSQVVVWDRIIERKEDAVLNLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSDLVNSTILPDQYT 148
BLAST of NO24G01290 vs. NCBI_GenBank
Match: OQS05828.1 (signal peptidase complex subunit 3 [Thraustotheca clavata]) HSP 1 Score: 142.5 bits (358), Expect = 1.200e-30 Identity = 75/174 (43.10%), Postives = 104/174 (59.77%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGHRDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAILDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSGLTNSTILPDQY 175 MHT W R NA+ TV+ + LT +TY H V+ LS+N + L+R RD D+A+ +FDL ADL+ F+WN KQLFV++V EY SK N ++VV+WD IV SK+DAIL + E + Y L D +LRN +T++L WD MP+ G LF + + +P QY Sbjct: 1 MHTIWTRANALFTLAMTVMSVMCALTTLTTYLHEPAPVVRTLSLNAVHSLKRYRD------RTDKAVLSFDLDADLSSVFNWNTKQLFVYIVAEYASKTNEKNEVVIWDAIVPSKDDAILQRKDEGVKYFLADQFDQLRNAQVTMKLKWDIMPVCGRLFQYTEGSTEFTMPAQY 168
BLAST of NO24G01290 vs. NCBI_GenBank
Match: OWZ10535.1 (Signal peptidase complex subunit 3 [Phytophthora megakarya]) HSP 1 Score: 138.3 bits (347), Expect = 2.300e-29 Identity = 77/176 (43.75%), Postives = 104/176 (59.09%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGHRDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAI-LDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRSGLTNSTI-LPDQY 175 M++ W R NAV F L + LTA ST+ H V++L + KL LR RD D+A +FDL ADL+ F+WN+KQLFV+++ E+E+ N + VVVWD+IV++KE A L E E + Y L D ELR N+TL L WD MP+ G LF+ S T + LPD+Y Sbjct: 243 MYSIWTRANAVFFTSLMALAIMCTLTAISTFVHEPTPVVRRLELTKLHSLRNYRDKA------DRATLSFDLDADLSSVFNWNVKQLFVYVMAEFETTSNARNHVVVWDKIVQTKEAASQLQFEDEGVKYFLADQHDELRGANVTLTLEWDIMPVCGRLFVHSSDTKANFELPDKY 412
BLAST of NO24G01290 vs. NCBI_GenBank
Match: GAY01219.1 (signal peptidase complex subunit 3, putative [Pythium insidiosum]) HSP 1 Score: 138.3 bits (347), Expect = 2.300e-29 Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 0 Query: 1 MHTFWVRLNAVVFFGFTVLLCLSLLTAFSTYGHRDYGTVKQLSINKLIQLRRVRDNGQTGYHYDQALFNFDLKADLTPAFDWNIKQLFVFLVVEYESKKNVLSQVVVWDRIVESKEDAI--LDLEAEFLDYPLRDPAVELRNKNITLRLVWDHMPLTGTLFMRS-GLTNSTILPDQY 175 MH+ W RLNA+VF T + L+ LT STY H V++L + L LR+ RDN D+A F+L ADL+ F+WN+KQLFV++V +++ N ++VV+WDRI+++K+ A L +E E ++Y L D ELR N+TLRL WD MP+ G LF+ S S ++P Y Sbjct: 1 MHSVWTRLNALVFASLTAIAVLAGLTTLSTYNHVATPVVRRLELQSLQSLRKYRDN------TDRATLTFNLDADLSSVFNWNVKQLFVYVVASFQTPSNEQNEVVIWDRIIQTKDAAATQLTVENEGVEYFLADQHDELRGANVTLRLEWDIMPVCGRLFIHSHDQRASFVMPSSY 171 The following BLAST results are available for this feature:
BLAST of NO24G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01290 ID=NO24G01290|Name=NO24G01290|organism=Nannochloropsis oceanica|type=gene|length=2015bpback to top protein sequence of NO24G01290.2 >NO24G01290.2-protein ID=NO24G01290.2-protein|Name=NO24G01290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=140bpback to top protein sequence of NO24G01290.1 >NO24G01290.1-protein ID=NO24G01290.1-protein|Name=NO24G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=176bpback to top Synonyms
Publications
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