NO24G01260, NO24G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01260 vs. NCBI_GenBank
Match: EWM24332.1 (abc transporter related protein [Nannochloropsis gaditana]) HSP 1 Score: 641.0 bits (1652), Expect = 4.100e-180 Identity = 362/651 (55.61%), Postives = 432/651 (66.36%), Query Frame = 0 Query: 35 AKWRAIYAKKPPGDTGKKTSPPAVLARLDATKGIVVS-DALEGKEAVVAFAAGKIEDYVLRLGDQL------------------------------KEQEEEQAQGVQSQEVQAKGGKRRGAGGGEDGE---QKRFMFMSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVAT--ELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQ--------SEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGSGDAWNKVYEGRRREREARG 642 AKWR IY++KPP GKK PP LARLDA GI+V+ ++ EG + AFA GK EDYVLR GD + E EE QG +++ + G+ ++ MFMSFSMHG FLA +KDRVVADVLGGSSDPLARRLIVQLGLYPLWYK++ MLSTGEIRKVL+AATLS+SPRVLVLDKPFDGLDAPSRKSL VLSQLC GFPRLLVDLGL+RRS+PRTSMVL+THR EE+P E RLV V +IE++G M+ R A LR P LPKL+RPQVPRA+TL + RENL T+L F VR EHVLL+++ W+VKQGE+WALKGLNGAGKSTLTRL+LE W + L+ERR E G ++ GRVAVGVP +G+VSTELHL LAATC +WP SAVVLSGL+PL + + P +G E E + P LLPLL EWG +LG+SSLYS PFG+LSQGQQKL VIARALIGAPPLLIFDE CQGLDS+HR L+++LL IAK+ASSWLT+LY+SHHEDEAL +VT+HVLELE+GR++F G + WN++ R++E EA G Sbjct: 39 AKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGK-EDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLXXXXXXXXXXXXAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRL-ASLRALGPAPLPPLPR------------TLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAE----------GHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPAXXXXXXXXXXVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGG 665
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_005759949.1 (ABC transporter [Emiliania huxleyi CCMP1516] >EOD07520.1 ABC transporter [Emiliania huxleyi CCMP1516]) HSP 1 Score: 182.6 bits (462), Expect = 4.000e-42 Identity = 171/504 (33.93%), Postives = 239/504 (47.42%), Query Frame = 0 Query: 139 MSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEE-IPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTREN--------LSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLV------ATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGSGDAWN 628 +SF H + LA+ A G P AR L+V+ GL+PL Y+ + +STGEIRKVL+ L SPR LVLD FDGLD SR+SL ++SQ+ GF +LLV G+ R+ T ++L+T R EE +P+ AT + D + + RS A+L P RLP P L E ++E +++ EH +L + W+V E W + G NGAGKSTL+RL+ A + + + V E XXXXXXXXXXXXXXXXXXX +G VSTE HL +A + + +V G D +E R + W LG+ L +PF LSQG+QK+ ++A AL P LL+ DE CQGLD R VL +++ + A S + +LY++HH +E L V THVL L+ G + G + ++ Sbjct: 132 VSFDAHQRLLADGGSVYRA---LGHLGPAARYLVVRFGLHPLLYRPVRAISTGEIRKVLLVRALGTSPRCLVLDNAFDGLDVASRQSLSELISQMLRGFGQLLVQ-GVDARATAHTQVLLLTQRAEEVVPEVAT--MSAFDGEGRLATSAREGRSGAELLADALAPAA----------------RLPARALPSEAEVAALWRGGPGEEAXXXXXXXXPALVEARSLQVRRGEHTILRGLDWRVGSDEHWLIAGGNGAGKSTLSRLLARAGAEPVAAGDFTVLGRRARVEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVGWVSTEAHLSVAGS--ERTAGEMVAEGSD--------------AEAARR------------------VASW---LGVDDLLDRPFRMLSQGEQKVVLVAAALARRPALLVLDEPCQGLDLLRRRRVLEVVQRVCSA--SRMRLLYITHHFEEVLPCV-THVLHLKGGEATYRGPREGYD 573
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_005855583.1 (atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526] >EKU20775.1 atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 181.4 bits (459), Expect = 8.800e-42 Identity = 105/184 (57.07%), Postives = 120/184 (65.22%), Query Frame = 0 Query: 101 EQEEEQAQGVQSQEVQAKGGKRRGAGGGEDGE---QKRFMFMSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQI 282 E EE QG +++ G+ ++ MFMSFSMHG FLA +KDRVVADVLGGSSDPLARRLIVQLGLYPLWYK++ MLSTGEIRKVL+AATLS+SP QLC GFPRLLVDLGL+RRSIPRTSMVL+THR EE+P E RLV V +I Sbjct: 4 EDTEESFQGADAKQXXXXXXXXXXXXXXXXGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSP-------------------------QLCQGFPRLLVDLGLARRSIPRTSMVLVTHRREEVPQEVGRLVSVDGFEI 162
BLAST of NO24G01260 vs. NCBI_GenBank
Match: GAX27259.1 (molybdate transport system ATP-binding protein [Fistulifera solaris]) HSP 1 Score: 177.2 bits (448), Expect = 1.700e-40 Identity = 137/461 (29.72%), Postives = 218/461 (47.29%), Query Frame = 0 Query: 162 GSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRV-AVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVG 622 G+ + A+ LIV+ GL+PL ++ + LS G+I+KVL+ LS P +L+LD FDGLD SR L+ ++S+ GF R ++ G+S R+ RT +V +T R EEI DE R++ D E G +R+ A+ ++ + L ++ P T N ++ + ++ + + +E N LL ++ W++ +GE + + GLNGAGKSTL+RL+ E+ T + H G + AV ++G VSTE H+ LA S V + + P + L W LG+ L + F ++SQG+Q+L +IA A+ P LL+FDE CQGLD HR VL L+E I +A ++++Y++HH +E ++ V H L L +G + F G Sbjct: 121 GNLNKAAQFLIVRFGLFPLLHQDVRTLSNGQIKKVLIVRALSHRPALLLLDNAFDGLDVASRDVLKQLVSKTLQGFTRDILVQGVSARNTARTQVVQVTQRAEEIVDE-FRIMTFLDRTAEINGK---WRTTARDTMSSTELLHLALHSPSAEPPLPDRNTLEGWWQSLHPVDT---NHPIDDDSALLVRLNQLTIERNGKALLKNLTWQIHKGERYIVGGLNGAGKSTLSRLLAHREEE----------TTIVH----------------------GTIQAVEADQVGWVSTERHMALA-------NSNVCVKDMFP---------------------------------VCQLPAVW---LGVDHLMERSFAEISQGEQRLVLIASAIAMRPQLLVFDEPCQGLDLLHRQRVLDLVERICEATD--MSLIYITHHMEERIEAV-QHALHLVEGEIVFSG 496
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_002179784.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48770.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 174.9 bits (442), Expect = 8.300e-40 Identity = 145/515 (28.16%), Postives = 229/515 (44.47%), Query Frame = 0 Query: 154 RVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVK----------------DMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRE------NLSTILEFHD---VRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLI--------LEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKA--------ASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGSGDAWN 628 +V+A+ GG A+ LIV+ GLYPL +++I LSTGEIRKVL+ L+ PR+L+LD FDGLD SR++L +++ Q GF + ++ G+ ++ RT + L+T R EE+ DE T + + D++ + + + AQ T S + P L P + + N ++ + +T L D +R++ V+L + WKV + W + G NGAGKSTL+RL+ E + + L +R L ++ QQ P +G VSTE HL D T+ +L L E +++ + EW L L + F LSQGQQKL ++A A+ P +L+ DE CQGLD HR L+L L+E + +A +S +T++Y++HH +E L + V+ L+ G+ + GS +N Sbjct: 169 KVIAE--GGQVSKAAQFLIVRFGLYPLLHREISTLSTGEIRKVLLVRALATRPRLLILDNAFDGLDVASRENLLDLVRQTLRGFKQDILVQGIDAKNAARTQICLVTQRPEEVADEFTNVAFLDPPHTDRVSPETSAQGGDLRTMVRNGQRATQIFAQSLGTTSPLEEGDLDDSPWDSRKDEYWNAPGL--PTLTEMSIWWNHGRKDDDDGTSSTNTTLPLVDAQGLRIQKGSTVVLQELDWKVWPSQHWLVAGGNGAGKSTLSRLLAYCETDSDTEGYLRVLHGKRNLPQIDIDDGQQTVVGSQFVHRR---------------PGVGWVSTESHLQ---RVHDQRTAREIL---------------------LEEASSDS--------YIVQTVTEWFNLTHDPKLLEQHFADLSQGQQKLVLLAAAISSRPRILVLDEPCQGLDIVHRRLLLGLVERLCQATDTNDTDTSSRSITLIYITHHMEEVLPSI-NQVVHLKDGQAVYQGSRKLYN 631
BLAST of NO24G01260 vs. NCBI_GenBank
Match: EJK45808.1 (hypothetical protein THAOC_35560 [Thalassiosira oceanica]) HSP 1 Score: 171.8 bits (434), Expect = 7.000e-39 Identity = 142/489 (29.04%), Postives = 221/489 (45.19%), Query Frame = 0 Query: 139 MSFSMHGQFLAEHKDRVVADVLGGSS--DPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPD--EATRLVGVKDMQIEFQGPMQIYRSDAQL-RLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENL-STILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVG 622 +SF H L+ A + GG + A+ LIV+LG+YPL K + LSTG+IR+VLV L P +L+LD FDGLDA RK L +V+ ++ GF ++ G+ R RT +VL++HR EEI D + + M E + RS +L R +R F R+N+ S ++E + +L + W V++GE W L G NG+GKSTL+RL+++A +G+ + G++ V +G VSTELH+H A ++W +V S + + PS + S + + + LL GE ++ ++ F + SQG+QKL +IA A+ L++ DE CQGLD +R VL+L+E + +++Y++HHEDE + + L LE GR + G Sbjct: 136 VSFESHADLLSMDISVHKALIPGGGNRLSTTAKFLIVRLGMYPLLSKPVNALSTGQIRRVLVVRALVSKPEILLLDNAFDGLDAEGRKGLHDVIERVLSGFKMDVLVQGIDARETARTQVVLLSHRAEEISDGFRTFSFLNNRKMHTEHRNG----RSPNELVRSIMNREDFPVRAWEAIDHYDVLNF---------------WHGSDLRDNVKSVLIETKGFYFSQENNAILSDLSWSVRRGERWHLAGSNGSGKSTLSRLLVQA--------------SIGNHPE----------------VTRGKLDVSTVNIGWVSTELHIHAA---RNWMNISV--SEILDIGPSALFFREKFDSGHSAKFDVNASVNVAIWLGLLEEGGE-------AAFLARRFSEFSQGEQKLLLIAAAISQGSQLIVLDEPCQGLDLINRGRVLSLVERLCGLTDR--SLIYITHHEDELVPSIRQR-LVLEGGRATYCG 560
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_009537230.1 (hypothetical protein PHYSODRAFT_319379 [Phytophthora sojae] >EGZ07664.1 hypothetical protein PHYSODRAFT_319379 [Phytophthora sojae]) HSP 1 Score: 168.7 bits (426), Expect = 5.900e-38 Identity = 150/492 (30.49%), Postives = 223/492 (45.33%), Query Frame = 0 Query: 128 GEDGEQKRFMFMSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPR--VLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVD-LGLSRRSIP-RTSMVLITHRGEEI-PDEATRLVGVKDMQIEFQGPMQIYRSDA-----------QLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEE--HQXPXXXXXPHLLPLLGEWGTLLGL-SSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDE 601 GE R +S H +F+AE+ RVVADVLGG P AR LIV+LGL+P+W +++ LSTGE+RK+L+A L ++PR VL+LD+PFDGLD +R+ L+ +L QL GF RLLV+ G + +T ++L+ +R E++ P+ + V +K + E QG A + + L + A T ET L+ + +D + +LLD++ + K E W L G NG+GKS+L R++++ L E +V E A PR +ST+ H+ L LH S Q +G E + P L +LL L ++ ++ +LSQG+QKL +IARAL P LLI DE GLD +R VL ++E I + A+ M+ ++HHEDE Sbjct: 124 GELPASCRLASLSLDAHREFVAENGHRVVADVLGGIGSPTARDLIVRLGLFPVWEQRVRHLSTGEMRKLLLAVALLETPRATVLILDQPFDGLDVKARRQLQWMLGQLTRGFTRLLVETTGAKHEAFAYKTQVLLVANRLEQVFPEIFSHTVLLKQGEDE-QGEQDTVEVVAWPEDKEDDVRNKAMMKRLEEFYGEEHEKRLKMTDTELVSLVEQLFDCKDEAETGSTETPAVQLNGVSISYD-----QKRILLDNVDFARKTHEHWVLLGPNGSGKSSLMRVLMQTPGHGLTEGEVVVVGE-------------PVRPSSAVPSNEDSTASSKPRREAISTDQHIQL-------------------LHKSL-------QRDGAAEDQTAFSLIASNAESPETAKLA---KSLLALPDAIETRSLSELSQGEQKLVLIARALAARPKLLILDEITHGLDPFNRAHVLRVIEAIGQHAAQQTHMVLITHHEDE 567
BLAST of NO24G01260 vs. NCBI_GenBank
Match: OGP70740.1 (hypothetical protein A2W09_00820 [Deltaproteobacteria bacterium RBG_16_50_11]) HSP 1 Score: 168.7 bits (426), Expect = 5.900e-38 Identity = 138/481 (28.69%), Postives = 217/481 (45.11%), Query Frame = 0 Query: 153 DRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGP----------MQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTIL-EFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGS 623 DR V V + + +LG+ PL + I LSTGEIRK L+A L +SP++L+LD+PFDGLD SR+SL + L R ++L+ HR EEI T ++ VKD ++ QGP Q+Y L ++ R +++ P T + ++L IL E + ++ + V+LD + W +K+GE WA+ G NG+GKST+ RLIL + + L G + R+G VS+EL + +S D + F + S GL +Q P P ++ EW +L + + +P+ +LS GQ+++ ++ARA++ +P LLI DE C GLD +R +L +LE I + + +LYV++H+DE L V THV+ + KG++ GS Sbjct: 129 DRTVTPV----DEERCAEIAFRLGIQPLLPQPITSLSTGEIRKALIARALMKSPQLLILDEPFDGLDEASRQSLAESIDHLMTASMR----------------VILVVHRLEEIVPNVTHVLLVKDGRLFMQGPKDEVLISENISQLYECQLHLEKSNGR------------------YQVTHGTEGSGPIDTDFWCQENHQDLPDILIEMKETTVQYDGRVVLDKLNWVMKRGENWAILGPNGSGKSTILRLILGENLQGYANQITLFGRRKGTGETLWEIK---------------------KRIGAVSSELQVQYRKK----------MSAYDVIASGF------YDSIGL-----YQYP----TPEQKKIVDEWIRVLRIEDIAGQPYHQLSYGQKRMILLARAMVKSPALLIVDEPCHGLDIPNRKRILEVLERIGQTQTH---LLYVTNHKDEILSCV-THVMRIHKGKVLKQGS 521
BLAST of NO24G01260 vs. NCBI_GenBank
Match: WP_062422123.1 (hypothetical protein [Leptolinea tardivitalis] >GAP21810.1 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Leptolinea tardivitalis]) HSP 1 Score: 167.2 bits (422), Expect = 1.700e-37 Identity = 144/473 (30.44%), Postives = 206/473 (43.55%), Query Frame = 0 Query: 153 DRVVADVLGGSSD---PLARR--LIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFV 621 DR+++ S D ARR I LG+ L +K+ LS GE RKVL+A L QSP++L+LD PF GLD+ SRK L N L+ L L R + ++L+T R EEIPD T ++G+ D I QG + LP+ P T L +EF + + +L I W +KQGE WA++G NGAGKSTL LIL + + + G + +G V+ E+H++ VV SG S GL + P + +W +LG+ L + F ++S G+Q+L ++ARAL+ P LLI DE CQGLDS +R+ +L +L+ + + +++LYV+HH DE L + THVL LEKGRM V Sbjct: 135 DRIISKTDSTSMDEQTASARREEAIALLGIGHLLNRKVTHLSNGEGRKVLLARALMQSPKLLILDDPFSGLDSDSRKMLINSLTVL------------LEHR---QQRLLLVTSREEEIPDGITHVLGIADHHIVVQGEKSAVCAS----------PFAQGVFKTNSVTEIKDIHLPETDWSTCPPGTPL------------VEFQNACVSYQGVNVLQDITWTMKQGEHWAIRGPNGAGKSTLLSLILADNPQVYANDVKIFGQQRGTGESIWEIK---------------------QHIGWVAPEIHMYYPRRAD---CLMVVCSGF-------------FDSVGLYQ---------TVTPEQSQIAEKWMQVLGIDGLSDRSFQEVSLGEQRLVLLARALVKQPRLLILDEPCQGLDSLNRSRILQVLDALCRQTP--VSLLYVTHHNDE-LPQSITHVLHLEKGRMKIV 521
BLAST of NO24G01260 vs. NCBI_GenBank
Match: KPL70720.1 (hypothetical protein ADM99_13885 [Leptolinea tardivitalis]) HSP 1 Score: 167.2 bits (422), Expect = 1.700e-37 Identity = 144/473 (30.44%), Postives = 206/473 (43.55%), Query Frame = 0 Query: 153 DRVVADVLGGSSD---PLARR--LIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFV 621 DR+++ S D ARR I LG+ L +K+ LS GE RKVL+A L QSP++L+LD PF GLD+ SRK L N L+ L L R + ++L+T R EEIPD T ++G+ D I QG + LP+ P T L +EF + + +L I W +KQGE WA++G NGAGKSTL LIL + + + G + +G V+ E+H++ VV SG S GL + P + +W +LG+ L + F ++S G+Q+L ++ARAL+ P LLI DE CQGLDS +R+ +L +L+ + + +++LYV+HH DE L + THVL LEKGRM V Sbjct: 116 DRIISKTDSTSMDEQTASARREEAIALLGIGHLLNRKVTHLSNGEGRKVLLARALMQSPKLLILDDPFSGLDSDSRKMLINSLTVL------------LEHR---QQRLLLVTSREEEIPDGITHVLGIADHHIVVQGEKSAVCAS----------PFAQGVFKTNSVTEIKDIHLPETDWSTCPPGTPL------------VEFQNACVSYQGVNVLQDITWTMKQGEHWAIRGPNGAGKSTLLSLILADNPQVYANDVKIFGQQRGTGESIWEIK---------------------QHIGWVAPEIHMYYPRRAD---CLMVVCSGF-------------FDSVGLYQ---------TVTPEQSQIAEKWMQVLGIDGLSDRSFQEVSLGEQRLVLLARALVKQPRLLILDEPCQGLDSLNRSRILQVLDALCRQTP--VSLLYVTHHNDE-LPQSITHVLHLEKGRMKIV 502 The following BLAST results are available for this feature:
BLAST of NO24G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01260 ID=NO24G01260|Name=NO24G01260|organism=Nannochloropsis oceanica|type=gene|length=2765bpback to top protein sequence of NO24G01260.1 >NO24G01260.1-protein ID=NO24G01260.1-protein|Name=NO24G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bpback to top Synonyms
Publications
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