NO24G01260, NO24G01260 (gene) Nannochloropsis oceanica

Overview
NameNO24G01260
Unique NameNO24G01260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2765
Alignment locationchr24:342870..345634 -

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Properties
Property NameValue
DescriptionAbc transporter related protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:342870..345634 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
Homology
BLAST of NO24G01260 vs. NCBI_GenBank
Match: EWM24332.1 (abc transporter related protein [Nannochloropsis gaditana])

HSP 1 Score: 641.0 bits (1652), Expect = 4.100e-180
Identity = 362/651 (55.61%), Postives = 432/651 (66.36%), Query Frame = 0
Query:   35 AKWRAIYAKKPPGDTGKKTSPPAVLARLDATKGIVVS-DALEGKEAVVAFAAGKIEDYVLRLGDQL------------------------------KEQEEEQAQGVQSQEVQAKGGKRRGAGGGEDGE---QKRFMFMSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVAT--ELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQ--------SEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGSGDAWNKVYEGRRREREARG 642
            AKWR IY++KPP   GKK  PP  LARLDA  GI+V+ ++ EG +   AFA GK EDYVLR GD +                               E  EE  QG  +++ +              G+   ++  MFMSFSMHG FLA +KDRVVADVLGGSSDPLARRLIVQLGLYPLWYK++ MLSTGEIRKVL+AATLS+SPRVLVLDKPFDGLDAPSRKSL  VLSQLC GFPRLLVDLGL+RRS+PRTSMVL+THR EE+P E  RLV V   +IE++G M+  R  A LR     P                   LPKL+RPQVPRA+TL +   RENL T+L F  VR    EHVLL+++ W+VKQGE+WALKGLNGAGKSTLTRL+LE W + L+ERR       E G ++                    GRVAVGVP +G+VSTELHL LAATC +WP SAVVLSGL+PL  +  + P             +G  E E  + P       LLPLL EWG +LG+SSLYS PFG+LSQGQQKL VIARALIGAPPLLIFDE CQGLDS+HR L+++LL  IAK+ASSWLT+LY+SHHEDEAL +VT+HVLELE+GR++F G  + WN++   R++E EA G
Sbjct:   39 AKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGK-EDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLXXXXXXXXXXXXAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRL-ASLRALGPAPLPPLPR------------TLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAE----------GHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPAXXXXXXXXXXVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGG 665          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_005759949.1 (ABC transporter [Emiliania huxleyi CCMP1516] >EOD07520.1 ABC transporter [Emiliania huxleyi CCMP1516])

HSP 1 Score: 182.6 bits (462), Expect = 4.000e-42
Identity = 171/504 (33.93%), Postives = 239/504 (47.42%), Query Frame = 0
Query:  139 MSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEE-IPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTREN--------LSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLV------ATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGSGDAWN 628
            +SF  H + LA+      A    G   P AR L+V+ GL+PL Y+ +  +STGEIRKVL+   L  SPR LVLD  FDGLD  SR+SL  ++SQ+  GF +LLV  G+  R+   T ++L+T R EE +P+ AT  +   D +       +  RS A+L      P                  RLP    P       L      E            ++E   +++   EH +L  + W+V   E W + G NGAGKSTL+RL+  A  + +    + V        E      XXXXXXXXXXXXXXXXXXX         +G VSTE HL +A +  +     +V  G D              +E  R                   +  W   LG+  L  +PF  LSQG+QK+ ++A AL   P LL+ DE CQGLD   R  VL +++ +  A  S + +LY++HH +E L  V THVL L+ G   + G  + ++
Sbjct:  132 VSFDAHQRLLADGGSVYRA---LGHLGPAARYLVVRFGLHPLLYRPVRAISTGEIRKVLLVRALGTSPRCLVLDNAFDGLDVASRQSLSELISQMLRGFGQLLVQ-GVDARATAHTQVLLLTQRAEEVVPEVAT--MSAFDGEGRLATSAREGRSGAELLADALAPAA----------------RLPARALPSEAEVAALWRGGPGEEAXXXXXXXXPALVEARSLQVRRGEHTILRGLDWRVGSDEHWLIAGGNGAGKSTLSRLLARAGAEPVAAGDFTVLGRRARVEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVGWVSTEAHLSVAGS--ERTAGEMVAEGSD--------------AEAARR------------------VASW---LGVDDLLDRPFRMLSQGEQKVVLVAAALARRPALLVLDEPCQGLDLLRRRRVLEVVQRVCSA--SRMRLLYITHHFEEVLPCV-THVLHLKGGEATYRGPREGYD 573          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_005855583.1 (atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526] >EKU20775.1 atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 181.4 bits (459), Expect = 8.800e-42
Identity = 105/184 (57.07%), Postives = 120/184 (65.22%), Query Frame = 0
Query:  101 EQEEEQAQGVQSQEVQAKGGKRRGAGGGEDGE---QKRFMFMSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQI 282
            E  EE  QG  +++                G+   ++  MFMSFSMHG FLA +KDRVVADVLGGSSDPLARRLIVQLGLYPLWYK++ MLSTGEIRKVL+AATLS+SP                         QLC GFPRLLVDLGL+RRSIPRTSMVL+THR EE+P E  RLV V   +I
Sbjct:    4 EDTEESFQGADAKQXXXXXXXXXXXXXXXXGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSP-------------------------QLCQGFPRLLVDLGLARRSIPRTSMVLVTHRREEVPQEVGRLVSVDGFEI 162          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: GAX27259.1 (molybdate transport system ATP-binding protein [Fistulifera solaris])

HSP 1 Score: 177.2 bits (448), Expect = 1.700e-40
Identity = 137/461 (29.72%), Postives = 218/461 (47.29%), Query Frame = 0
Query:  162 GSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRV-AVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVG 622
            G+ +  A+ LIV+ GL+PL ++ +  LS G+I+KVL+   LS  P +L+LD  FDGLD  SR  L+ ++S+   GF R ++  G+S R+  RT +V +T R EEI DE  R++   D   E  G    +R+ A+  ++ +                     L   ++   P  T   N    ++ + ++  + + +E N   LL ++ W++ +GE + + GLNGAGKSTL+RL+    E+          T + H                      G + AV   ++G VSTE H+ LA        S V +  + P                                 +  L   W   LG+  L  + F ++SQG+Q+L +IA A+   P LL+FDE CQGLD  HR  VL L+E I +A    ++++Y++HH +E ++ V  H L L +G + F G
Sbjct:  121 GNLNKAAQFLIVRFGLFPLLHQDVRTLSNGQIKKVLIVRALSHRPALLLLDNAFDGLDVASRDVLKQLVSKTLQGFTRDILVQGVSARNTARTQVVQVTQRAEEIVDE-FRIMTFLDRTAEINGK---WRTTARDTMSSTELLHLALHSPSAEPPLPDRNTLEGWWQSLHPVDT---NHPIDDDSALLVRLNQLTIERNGKALLKNLTWQIHKGERYIVGGLNGAGKSTLSRLLAHREEE----------TTIVH----------------------GTIQAVEADQVGWVSTERHMALA-------NSNVCVKDMFP---------------------------------VCQLPAVW---LGVDHLMERSFAEISQGEQRLVLIASAIAMRPQLLVFDEPCQGLDLLHRQRVLDLVERICEATD--MSLIYITHHMEERIEAV-QHALHLVEGEIVFSG 496          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_002179784.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48770.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 174.9 bits (442), Expect = 8.300e-40
Identity = 145/515 (28.16%), Postives = 229/515 (44.47%), Query Frame = 0
Query:  154 RVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVK----------------DMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRE------NLSTILEFHD---VRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLI--------LEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKA--------ASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGSGDAWN 628
            +V+A+  GG     A+ LIV+ GLYPL +++I  LSTGEIRKVL+   L+  PR+L+LD  FDGLD  SR++L +++ Q   GF + ++  G+  ++  RT + L+T R EE+ DE T +  +                 D++   +   +  +  AQ   T S                   +  P L  P +   +   N   ++      + +T L   D   +R++    V+L  + WKV   + W + G NGAGKSTL+RL+         E + + L  +R L   ++   QQ                          P +G VSTE HL       D  T+  +L                     L E             +++  + EW  L     L  + F  LSQGQQKL ++A A+   P +L+ DE CQGLD  HR L+L L+E + +A        +S  +T++Y++HH +E L  +   V+ L+ G+  + GS   +N
Sbjct:  169 KVIAE--GGQVSKAAQFLIVRFGLYPLLHREISTLSTGEIRKVLLVRALATRPRLLILDNAFDGLDVASRENLLDLVRQTLRGFKQDILVQGIDAKNAARTQICLVTQRPEEVADEFTNVAFLDPPHTDRVSPETSAQGGDLRTMVRNGQRATQIFAQSLGTTSPLEEGDLDDSPWDSRKDEYWNAPGL--PTLTEMSIWWNHGRKDDDDGTSSTNTTLPLVDAQGLRIQKGSTVVLQELDWKVWPSQHWLVAGGNGAGKSTLSRLLAYCETDSDTEGYLRVLHGKRNLPQIDIDDGQQTVVGSQFVHRR---------------PGVGWVSTESHLQ---RVHDQRTAREIL---------------------LEEASSDS--------YIVQTVTEWFNLTHDPKLLEQHFADLSQGQQKLVLLAAAISSRPRILVLDEPCQGLDIVHRRLLLGLVERLCQATDTNDTDTSSRSITLIYITHHMEEVLPSI-NQVVHLKDGQAVYQGSRKLYN 631          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: EJK45808.1 (hypothetical protein THAOC_35560 [Thalassiosira oceanica])

HSP 1 Score: 171.8 bits (434), Expect = 7.000e-39
Identity = 142/489 (29.04%), Postives = 221/489 (45.19%), Query Frame = 0
Query:  139 MSFSMHGQFLAEHKDRVVADVLGGSS--DPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPD--EATRLVGVKDMQIEFQGPMQIYRSDAQL-RLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENL-STILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVG 622
            +SF  H   L+       A + GG +     A+ LIV+LG+YPL  K +  LSTG+IR+VLV   L   P +L+LD  FDGLDA  RK L +V+ ++  GF   ++  G+  R   RT +VL++HR EEI D       +  + M  E +      RS  +L R   +R                  F                     R+N+ S ++E          + +L  + W V++GE W L G NG+GKSTL+RL+++A               +G+  +                   G++ V    +G VSTELH+H A   ++W   +V  S +  + PS     +   S    + + +          LL   GE       ++  ++ F + SQG+QKL +IA A+     L++ DE CQGLD  +R  VL+L+E +        +++Y++HHEDE +  +    L LE GR  + G
Sbjct:  136 VSFESHADLLSMDISVHKALIPGGGNRLSTTAKFLIVRLGMYPLLSKPVNALSTGQIRRVLVVRALVSKPEILLLDNAFDGLDAEGRKGLHDVIERVLSGFKMDVLVQGIDARETARTQVVLLSHRAEEISDGFRTFSFLNNRKMHTEHRNG----RSPNELVRSIMNREDFPVRAWEAIDHYDVLNF---------------WHGSDLRDNVKSVLIETKGFYFSQENNAILSDLSWSVRRGERWHLAGSNGSGKSTLSRLLVQA--------------SIGNHPE----------------VTRGKLDVSTVNIGWVSTELHIHAA---RNWMNISV--SEILDIGPSALFFREKFDSGHSAKFDVNASVNVAIWLGLLEEGGE-------AAFLARRFSEFSQGEQKLLLIAAAISQGSQLIVLDEPCQGLDLINRGRVLSLVERLCGLTDR--SLIYITHHEDELVPSIRQR-LVLEGGRATYCG 560          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: XP_009537230.1 (hypothetical protein PHYSODRAFT_319379 [Phytophthora sojae] >EGZ07664.1 hypothetical protein PHYSODRAFT_319379 [Phytophthora sojae])

HSP 1 Score: 168.7 bits (426), Expect = 5.900e-38
Identity = 150/492 (30.49%), Postives = 223/492 (45.33%), Query Frame = 0
Query:  128 GEDGEQKRFMFMSFSMHGQFLAEHKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPR--VLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVD-LGLSRRSIP-RTSMVLITHRGEEI-PDEATRLVGVKDMQIEFQGPMQIYRSDA-----------QLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEE--HQXPXXXXXPHLLPLLGEWGTLLGL-SSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDE 601
            GE     R   +S   H +F+AE+  RVVADVLGG   P AR LIV+LGL+P+W +++  LSTGE+RK+L+A  L ++PR  VL+LD+PFDGLD  +R+ L+ +L QL  GF RLLV+  G    +   +T ++L+ +R E++ P+  +  V +K  + E QG        A           +  +                        L +        A T   ET    L+ +   +D      + +LLD++ +  K  E W L G NG+GKS+L R++++     L E   +V  E                            A   PR   +ST+ H+ L                   LH S        Q +G  E +            P    L     +LL L  ++ ++   +LSQG+QKL +IARAL   P LLI DE   GLD  +R  VL ++E I + A+    M+ ++HHEDE
Sbjct:  124 GELPASCRLASLSLDAHREFVAENGHRVVADVLGGIGSPTARDLIVRLGLFPVWEQRVRHLSTGEMRKLLLAVALLETPRATVLILDQPFDGLDVKARRQLQWMLGQLTRGFTRLLVETTGAKHEAFAYKTQVLLVANRLEQVFPEIFSHTVLLKQGEDE-QGEQDTVEVVAWPEDKEDDVRNKAMMKRLEEFYGEEHEKRLKMTDTELVSLVEQLFDCKDEAETGSTETPAVQLNGVSISYD-----QKRILLDNVDFARKTHEHWVLLGPNGSGKSSLMRVLMQTPGHGLTEGEVVVVGE-------------PVRPSSAVPSNEDSTASSKPRREAISTDQHIQL-------------------LHKSL-------QRDGAAEDQTAFSLIASNAESPETAKLA---KSLLALPDAIETRSLSELSQGEQKLVLIARALAARPKLLILDEITHGLDPFNRAHVLRVIEAIGQHAAQQTHMVLITHHEDE 567          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: OGP70740.1 (hypothetical protein A2W09_00820 [Deltaproteobacteria bacterium RBG_16_50_11])

HSP 1 Score: 168.7 bits (426), Expect = 5.900e-38
Identity = 138/481 (28.69%), Postives = 217/481 (45.11%), Query Frame = 0
Query:  153 DRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGP----------MQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTIL-EFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFVGS 623
            DR V  V     +     +  +LG+ PL  + I  LSTGEIRK L+A  L +SP++L+LD+PFDGLD  SR+SL   +  L     R                ++L+ HR EEI    T ++ VKD ++  QGP           Q+Y     L  ++ R                  +++        P  T    +   ++L  IL E  +  ++ +  V+LD + W +K+GE WA+ G NG+GKST+ RLIL    +    +  L     G  +                            R+G VS+EL +               +S  D +   F      + S GL     +Q P     P    ++ EW  +L +  +  +P+ +LS GQ+++ ++ARA++ +P LLI DE C GLD  +R  +L +LE I +  +    +LYV++H+DE L  V THV+ + KG++   GS
Sbjct:  129 DRTVTPV----DEERCAEIAFRLGIQPLLPQPITSLSTGEIRKALIARALMKSPQLLILDEPFDGLDEASRQSLAESIDHLMTASMR----------------VILVVHRLEEIVPNVTHVLLVKDGRLFMQGPKDEVLISENISQLYECQLHLEKSNGR------------------YQVTHGTEGSGPIDTDFWCQENHQDLPDILIEMKETTVQYDGRVVLDKLNWVMKRGENWAILGPNGSGKSTILRLILGENLQGYANQITLFGRRKGTGETLWEIK---------------------KRIGAVSSELQVQYRKK----------MSAYDVIASGF------YDSIGL-----YQYP----TPEQKKIVDEWIRVLRIEDIAGQPYHQLSYGQKRMILLARAMVKSPALLIVDEPCHGLDIPNRKRILEVLERIGQTQTH---LLYVTNHKDEILSCV-THVMRIHKGKVLKQGS 521          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: WP_062422123.1 (hypothetical protein [Leptolinea tardivitalis] >GAP21810.1 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Leptolinea tardivitalis])

HSP 1 Score: 167.2 bits (422), Expect = 1.700e-37
Identity = 144/473 (30.44%), Postives = 206/473 (43.55%), Query Frame = 0
Query:  153 DRVVADVLGGSSD---PLARR--LIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFV 621
            DR+++     S D     ARR   I  LG+  L  +K+  LS GE RKVL+A  L QSP++L+LD PF GLD+ SRK L N L+ L            L  R   +  ++L+T R EEIPD  T ++G+ D  I  QG      +                              LP+      P  T L            +EF +  +      +L  I W +KQGE WA++G NGAGKSTL  LIL    +       +   + G  +                             +G V+ E+H++            VV SG                S GL +            P    +  +W  +LG+  L  + F ++S G+Q+L ++ARAL+  P LLI DE CQGLDS +R+ +L +L+ + +     +++LYV+HH DE L +  THVL LEKGRM  V
Sbjct:  135 DRIISKTDSTSMDEQTASARREEAIALLGIGHLLNRKVTHLSNGEGRKVLLARALMQSPKLLILDDPFSGLDSDSRKMLINSLTVL------------LEHR---QQRLLLVTSREEEIPDGITHVLGIADHHIVVQGEKSAVCAS----------PFAQGVFKTNSVTEIKDIHLPETDWSTCPPGTPL------------VEFQNACVSYQGVNVLQDITWTMKQGEHWAIRGPNGAGKSTLLSLILADNPQVYANDVKIFGQQRGTGESIWEIK---------------------QHIGWVAPEIHMYYPRRAD---CLMVVCSGF-------------FDSVGLYQ---------TVTPEQSQIAEKWMQVLGIDGLSDRSFQEVSLGEQRLVLLARALVKQPRLLILDEPCQGLDSLNRSRILQVLDALCRQTP--VSLLYVTHHNDE-LPQSITHVLHLEKGRMKIV 521          
BLAST of NO24G01260 vs. NCBI_GenBank
Match: KPL70720.1 (hypothetical protein ADM99_13885 [Leptolinea tardivitalis])

HSP 1 Score: 167.2 bits (422), Expect = 1.700e-37
Identity = 144/473 (30.44%), Postives = 206/473 (43.55%), Query Frame = 0
Query:  153 DRVVADVLGGSSD---PLARR--LIVQLGLYPLWYKKIFMLSTGEIRKVLVAATLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRSIPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTHSRPXXXXXXXXXXXXXXXXXFRLPKLFRPQVPRATTLKNETTRENLSTILEFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWEKQLQERRWLVATELGHSQQXXXXXXXXXXXXXXXXXXXGRVAVGVPRLGMVSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEEHQXPXXXXXPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARALIGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDEALDKVTTHVLELEKGRMAFV 621
            DR+++     S D     ARR   I  LG+  L  +K+  LS GE RKVL+A  L QSP++L+LD PF GLD+ SRK L N L+ L            L  R   +  ++L+T R EEIPD  T ++G+ D  I  QG      +                              LP+      P  T L            +EF +  +      +L  I W +KQGE WA++G NGAGKSTL  LIL    +       +   + G  +                             +G V+ E+H++            VV SG                S GL +            P    +  +W  +LG+  L  + F ++S G+Q+L ++ARAL+  P LLI DE CQGLDS +R+ +L +L+ + +     +++LYV+HH DE L +  THVL LEKGRM  V
Sbjct:  116 DRIISKTDSTSMDEQTASARREEAIALLGIGHLLNRKVTHLSNGEGRKVLLARALMQSPKLLILDDPFSGLDSDSRKMLINSLTVL------------LEHR---QQRLLLVTSREEEIPDGITHVLGIADHHIVVQGEKSAVCAS----------PFAQGVFKTNSVTEIKDIHLPETDWSTCPPGTPL------------VEFQNACVSYQGVNVLQDITWTMKQGEHWAIRGPNGAGKSTLLSLILADNPQVYANDVKIFGQQRGTGESIWEIK---------------------QHIGWVAPEIHMYYPRRAD---CLMVVCSGF-------------FDSVGLYQ---------TVTPEQSQIAEKWMQVLGIDGLSDRSFQEVSLGEQRLVLLARALVKQPRLLILDEPCQGLDSLNRSRILQVLDALCRQTP--VSLLYVTHHNDE-LPQSITHVLHLEKGRMKIV 502          
The following BLAST results are available for this feature:
BLAST of NO24G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24332.14.100e-18055.61abc transporter related protein [Nannochloropsis g... [more]
XP_005759949.14.000e-4233.93ABC transporter [Emiliania huxleyi CCMP1516] >EOD0... [more]
XP_005855583.18.800e-4257.07atpbinding cassette superfamily [Nannochloropsis g... [more]
GAX27259.11.700e-4029.72molybdate transport system ATP-binding protein [Fi... [more]
XP_002179784.18.300e-4028.16predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK45808.17.000e-3929.04hypothetical protein THAOC_35560 [Thalassiosira oc... [more]
XP_009537230.15.900e-3830.49hypothetical protein PHYSODRAFT_319379 [Phytophtho... [more]
OGP70740.15.900e-3828.69hypothetical protein A2W09_00820 [Deltaproteobacte... [more]
WP_062422123.11.700e-3730.44hypothetical protein [Leptolinea tardivitalis] >GA... [more]
KPL70720.11.700e-3730.44hypothetical protein ADM99_13885 [Leptolinea tardi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002864NSK002864Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01260.1NO24G01260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|132082gene_7351Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100105g3gene6141Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01260.1NO24G01260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01260 ID=NO24G01260|Name=NO24G01260|organism=Nannochloropsis oceanica|type=gene|length=2765bp
ATGCCAGGGGTCCTGCCACGACGGGCCGCGGCGATGACAGTGGTGGCCTG
CAGCAGCGGCGGTGGTGGCGGCCGGAGATTCACGACCAGCAAGGCAGAGG
CGGCCAAATGGAGGGCAATTTACGCGAAAAAACCTCCTGGCGACACCGGG
AAAAAGACCTCACCACCCGCCGTGTTAGCCCGCCTGGACGCCACCAAAGG
AATAGTTGTTTCTGATGCTCTAGAGGGGAAAGAGGCGGTGGTGGCGTTTG
CAGCGGGGAAAATCGAGGATTATGTGTTGCGGTTGGGTGACCAGTTgtgt
gttattggggaaaatggggcggggaaatccctcttttggcaggcactcag
tggaaaggtacacgtcctccccctggtatggaaagGAAGGAGCAAGAGGA
AGAGCAAGCACAGGGCGTGCAAAGCCAGGAGGTGCAAGCAAAGGGAGGAA
AGCGCAGGGGGGCGGGAGGGGGGGAGGACGGGGAACAAAAACGCTTTATG
TTCATGTCGTTTAGTATGCATGGGCAGTTTCTGGCCGAGCATAAGGATAG
AGTGGTGGCAGACGTGTTGGGAGGATCCAGCGATCCATTGGCTCGACGCT
TGATCGTGCAACTGGGGCTTTATCCATTATGgtaagaatgactataggga
tatgaatgaccgtgtttcccctccatatatccatatttcattcccttttt
gcgccccccacttccaaaatggcttgccatcttttgtgggtcacaaatat
tactttcaactggttcttattgcagccatttctctttccctgatttcgcc
cagGTACAAGAAAATCTTCATGCTCTCCACAGGCGAGATCCGCAAGGTCC
TTGTCGCCGCTACCCTCAGTCAATCTCCGCGCGTGCTGGTGCTGGACAAG
CCATTTGATGGTCTCGATGCTCCTTCCAGgtatgctggaaaaattggaag
atttctaatttggctttcgttcaagaggctgactttctgatggatgtctt
tccctccttccctccctccctccctccctccttccctccctccctccttc
cctccctccctccctcccccctatcagGAAAAGCCTGCGAAACGTCCTTT
CGCAGCTTTGTCTAGGGTTTCCCCGTCTGCTGGTCGACCTGGGATTGAGC
CGCCGTTCAATACCACGGACAAGCATGGTGCTAATTACGCACAGAGGGGA
GGAGATTCCAGACGAGGCAACGAGACTGGTTGGGGTGAAAGACATGCAGA
TTGgtcggtggaaaaaaggaggggggggaaaggagtgtgagaggaaggaa
gggacgaacggacggatgtgggcgccattttttctccccccgtactcaag
gaaagggagggctgtcccatcaccaaccaccttactcgtcctccccctcc
tcccctcttccaccttcccccaatcatccagAATTCCAAGGCCCCATGCA
AATATACCGTAGCGACGCTCAGCTCCGTCTCACCCACTCCAGACCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACCTTCCTTC
CGTCTCCCCAAGCTCTTCCGGCCTCAAGTCCCCCGAGCCACCACCCTCAA
GAACGAAACAACCCGGGAAAACCTCTCCACCATCCTTGAATTCCACGATG
TCCGCCTCGAAGTAAATGAGCACGTCCTCCTCGACAGCATCCAGTGGAAG
GTCAAGCAAGGGGAAATATGGGCTCTGAAGGGGCTTAACGGCGCCGGGAA
ATCCACTTTAACGAGACTCATCCTCGAAGCCTGGGAGAAGCAACTCCAGG
AACGGCGATGGCTGGTCGCTACCGAGCTTGGACATTCACAGCAGACACCA
CAGCAGCAGCAGCAGCAACAACAACAACAACAGCGGGAGCAGCGGCACCA
AGGGCGTGTGGCAGTGGGCGTGCCTCGTCTAGGGATGGTCTCGACGGAGC
TCCACCTTCACTTAGCAGCCACTTGCCAGGACTGGCCCACCTCCGCCGTC
GTCCTCTCAGGCCTAGACCCTCTGCATCCCTCTTTTTCGATGCAACCACA
GCCACACCAGTCGGAGGGGCTGCGGGAGCAGGAGGAGCACCAGCAGCCTT
ATCACCCGCCACCGCCTCACCTCCTCCCTTTGCTCGGCGAATGGGGAACT
CTCCTTGGTCTTTCCTCCCTTTACTCCAAGCCCTTCGGAAAGCTCTCACA
AGGACAACAAAAATTGGCTGTGATTGCTCGAGCTTTGATCGGGGCGCCTC
CTCTTCTCATTTTTGATGAGGGTTGTCAGGGGTTGGACAGCAAGCATCGG
ACATTGGTCTTGGCTTTGTTGGAGAACATCGCCAAGGCGGCGTCTTCGTG
GTTGACGATGCTATACGTGAGTCATCACGAAGACGAGGCACTGGATAAGG
TGACTACACATGTGTTAGAGCTGGAGAAGGGCCGTATGGCGTTTGTCGGA
TCTGGAGACGCGTGGAACAAGGTGTATGAAGGGAGGAGGAGGGAGAGAGA
AGCGAGGGGTGAGGGAAGCGAGGGGTGAGGATGGGGAACAAAGAAGTCAC
AAAAGAAATTGTGTCAAGGCAGGATAATTCAGTGCATGCATCTTTCCAAA
CTGGACGGATTTTGCGATTAATTTTCTACAAGAGGTCGCCTGCCGGTAGA
AAATGTGAGGGATTAAGAATGGGAAGTAAAATGGAACAGGTAAAATAAAT
GGCTCCGATAAAATTAACAAAACAATTCTTGCACTTAAATCTTGCTGACG
TATGCTTATGTTCAT
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protein sequence of NO24G01260.1

>NO24G01260.1-protein ID=NO24G01260.1-protein|Name=NO24G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bp
MPGVLPRRAAAMTVVACSSGGGGGRRFTTSKAEAAKWRAIYAKKPPGDTG
KKTSPPAVLARLDATKGIVVSDALEGKEAVVAFAAGKIEDYVLRLGDQLK
EQEEEQAQGVQSQEVQAKGGKRRGAGGGEDGEQKRFMFMSFSMHGQFLAE
HKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKKIFMLSTGEIRKVLVAA
TLSQSPRVLVLDKPFDGLDAPSRKSLRNVLSQLCLGFPRLLVDLGLSRRS
IPRTSMVLITHRGEEIPDEATRLVGVKDMQIEFQGPMQIYRSDAQLRLTH
SRPSSSSSSSSSSSSSSSPSFRLPKLFRPQVPRATTLKNETTRENLSTIL
EFHDVRLEVNEHVLLDSIQWKVKQGEIWALKGLNGAGKSTLTRLILEAWE
KQLQERRWLVATELGHSQQTPQQQQQQQQQQQREQRHQGRVAVGVPRLGM
VSTELHLHLAATCQDWPTSAVVLSGLDPLHPSFSMQPQPHQSEGLREQEE
HQQPYHPPPPHLLPLLGEWGTLLGLSSLYSKPFGKLSQGQQKLAVIARAL
IGAPPLLIFDEGCQGLDSKHRTLVLALLENIAKAASSWLTMLYVSHHEDE
ALDKVTTHVLELEKGRMAFVGSGDAWNKVYEGRRREREARGEGSEG*
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Synonyms
Publications