NO24G01250, NO24G01250 (gene) Nannochloropsis oceanica

Overview
NameNO24G01250
Unique NameNO24G01250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1131
Alignment locationchr24:338085..339215 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:338085..339215 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01250.1NO24G01250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01250.1NO24G01250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01250 ID=NO24G01250|Name=NO24G01250|organism=Nannochloropsis oceanica|type=gene|length=1131bp
ATGGTTGGTAGGGCTACTCCTGGGGTGCCCCTCCTTCTCATCCTCGGCCT
CGAAACCGTACACGCATTAAACACTTACCTTGCTGCTACTGCCACGCCTG
CTGCCGAGGCTGCTGCTGGTGAGGCTGCTGGAGGAGGAGCTGCAGCAGCA
GCGGTAGGACGGGATGTACGGCAGAAGGTGGCTTTCGTGCTCGGGCTGGG
CCAGCGGGGATTTGCGTCTTCTCAGGAAGACGAGAGAGAGGAGGAAGGGG
AGGAGGAGGAGGAGGGGGTGGGGTTCGAATGGGAAGTCCTTCCCCTCGTC
GTAACTCCCGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGAAGGGGCCCGTGGCGCTCTAGGCGATGGTGTACGGTTCTTGGCTGAGA
TGTGCCCAACGACGCCGATGGTGGTGAGAGAGACGCTGGTATCAGTGGTC
GGCAATGCCGTGAGGAAAGCCTTGTGGAGGGAGGAGGGAGGGAGAGAGGA
ATGGGAGGTGGAGAGCACGGCGGAAAGCTGTCGGCGGACGGTGAACCAGA
CCGTGAGGGAGGTCAAGGAGAGGTTGTGTGCCGCGGAGCTGACGATGCTC
CCGTGGCCTTTGCCTGAATTTCTCCCTTCTTTTCCCTCTGCTGCTGCTGC
TGCAGTTGCAGGTGGTAGGTGTGGGGTCGGAGCTGTGGCTGGAGAGGTGG
TGCCAGGGACGTTATGGTGTGATTTGACAGGCGCTTCCTCTACCTCGTCC
TCCCTCCCTCCCTCCTCCATTCGCAAGGGTAAGCTCTCCCTCCGCACTGA
TAAGATCGAAATCAAGAGCAACAGCAGCAACAGCAGCAGTGGGCTTCCTA
TAGGATGGAACGACCTTTCCCGTCTCCTCCGACTTGAGTCCCTCCTCGAC
GCTATCCTCCTCCCCTCCCTCCCTCCCGCCCTCCCGTCCTCCTCCTCCTC
CTCTCGTCTCCAGAACCCTGTCAAATGGGTTGAGAAGTATTTGGAGCTAA
TAAGGAGGGAGGGAGGGGGGCAGGGCTGGTCAGCTGTCGGGGTCTCTCCT
CAGCTCGCGCAATTTGCGCGAGAGCTGGCCATGGCCGCCTGGGAGGAGTG
GGAGGAAAGGGGGGAGGGAGAGAGAGGGTGA
back to top

protein sequence of NO24G01250.1

>NO24G01250.1-protein ID=NO24G01250.1-protein|Name=NO24G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bp
MVGRATPGVPLLLILGLETVHALNTYLAATATPAAEAAAGEAAGGGAAAA
AVGRDVRQKVAFVLGLGQRGFASSQEDEREEEGEEEEEGVGFEWEVLPLV
VTPEEGGREGGREGGREEGARGALGDGVRFLAEMCPTTPMVVRETLVSVV
GNAVRKALWREEGGREEWEVESTAESCRRTVNQTVREVKERLCAAELTML
PWPLPEFLPSFPSAAAAAVAGGRCGVGAVAGEVVPGTLWCDLTGASSTSS
SLPPSSIRKGKLSLRTDKIEIKSNSSNSSSGLPIGWNDLSRLLRLESLLD
AILLPSLPPALPSSSSSSRLQNPVKWVEKYLELIRREGGGQGWSAVGVSP
QLAQFARELAMAAWEEWEERGEGERG*
back to top
Synonyms
Publications