NO24G01230, NO24G01230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01230 vs. NCBI_GenBank
Match: EWM24330.1 (80 kda mcm3-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 428.3 bits (1100), Expect = 5.800e-116 Identity = 207/265 (78.11%), Postives = 232/265 (87.55%), Query Frame = 0 Query: 2 SKIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLTGDLKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEELRELAQSRPWLEV 267 +KIRP+EWLL+SVEYMEDELMDKGR GR GG G +LD DRSWGQVT LENYKFHFQRLRMVAKELIMQNFSYGGNISTTSI+++ERLTRYWII+QHHLN N DFVRDDGKQNTEQLTNTLVPL+ENY YAHML QP+LC HEAEF +Y VLLTGDLKQALKGG GVS SPEVRLA+DVL VETDNFARFF+LLR+APYL CLMAK+VERMR+KALEVW RA+NPTK + T+F ++ ALC+Q E+EL+ LA SRPW+ V Sbjct: 44 AKIRPLEWLLRSVEYMEDELMDKGRSGRVGG-GEGEVLDGDRSWGQVTALENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIEIVERLTRYWIIFQHHLNANEDFVRDDGKQNTEQLTNTLVPLQENYKYAHMLGQPALCAHEAEFQAYGVLLTGDLKQALKGGVGVSRSPEVRLAVDVLTCVETDNFARFFSLLRRAPYLPGCLMAKYVERMREKALEVWGRAYNPTKARGTAFRTADVLRALCMQDEDELKALAVSRPWVVV 307
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_020386878.1 (germinal-center associated nuclear protein isoform X2 [Rhincodon typus]) HSP 1 Score: 114.8 bits (286), Expect = 1.400e-21 Identity = 83/261 (31.80%), Postives = 133/261 (50.96%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEELRELAQ 260 ++RP L +++Y+ ++MD G EG + R W Y F + R R V K++ Q+ + ++ +IE+ TR+ I HHL P D K N E LT L LKE Y + + + C++EAEF Y VLL GD L++ + P V +SPEV+LA+ ++ +NF RFF L+R A YL AC++ ++ +++R +AL+ AF + Q++T F +E + L + EE E + Sbjct: 593 ELRPAAVLKMTMDYLVTKIMDLG----EG---------NYRDW--------YDFVWNRTRGVRKDITQQHL-----CNQLTVMLIEKCTRFHIHCSHHLCEEP-MSSYDAKINDENLTKCLQSLKE--MYQDLATKDTYCENEAEFRGYHVLLNLNEGDILREVQQLRPVVRNSPEVKLAVQAFAALNNNNFVRFFKLVRSASYLNACILHRYFKQVRREALKTLTFAFTVSSQRSTMFPMETLVRMLLFKDCEEAEEFTR 824
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_020386877.1 (germinal-center associated nuclear protein isoform X1 [Rhincodon typus]) HSP 1 Score: 114.8 bits (286), Expect = 1.400e-21 Identity = 83/261 (31.80%), Postives = 133/261 (50.96%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEELRELAQ 260 ++RP L +++Y+ ++MD G EG + R W Y F + R R V K++ Q+ + ++ +IE+ TR+ I HHL P D K N E LT L LKE Y + + + C++EAEF Y VLL GD L++ + P V +SPEV+LA+ ++ +NF RFF L+R A YL AC++ ++ +++R +AL+ AF + Q++T F +E + L + EE E + Sbjct: 593 ELRPAAVLKMTMDYLVTKIMDLG----EG---------NYRDW--------YDFVWNRTRGVRKDITQQHL-----CNQLTVMLIEKCTRFHIHCSHHLCEEP-MSSYDAKINDENLTKCLQSLKE--MYQDLATKDTYCENEAEFRGYHVLLNLNEGDILREVQQLRPVVRNSPEVKLAVQAFAALNNNNFVRFFKLVRSASYLNACILHRYFKQVRREALKTLTFAFTVSSQRSTMFPMETLVRMLLFKDCEEAEEFTR 824
BLAST of NO24G01230 vs. NCBI_GenBank
Match: ETE65289.1 (80 kDa MCM3-associated protein, partial [Ophiophagus hannah]) HSP 1 Score: 114.4 bits (285), Expect = 1.900e-21 Identity = 84/255 (32.94%), Postives = 129/255 (50.59%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP E L +++Y+ ++MDKG EG + R W Y F + R R + K++ Q+ S ++ +IE+ TR+ I HHL P D K N E +T L LKE Y + ++ CK EAEF Y+VLL GD L++ + P V +SPEVR A+ ++ ++NF +FF L++ A YL ACL+ + ++R AL+ A+ Q++T F LE I L + EE Sbjct: 676 ELRPSEVLSMTMDYLVTQIMDKG----EG---------NYREW--------YDFVWNRTRGIRKDITQQHL-----CSPLTVSLIEKCTRFHIHCSHHLCEEP-MSSFDAKINNENMTKCLQSLKE--MYQDLANKGIYCKGEAEFRGYNVLLNLNKGDILREVQQFRPSVRNSPEVRFAVQAFAALNSNNFVKFFKLVQTASYLNACLLHCYFNQIRKDALKCLNFAYTVNYQRSTIFPLENIVRMLLFRNLEE 901
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_012402867.1 (germinal-center associated nuclear protein-like, partial [Sarcophilus harrisii]) HSP 1 Score: 113.6 bits (283), Expect = 3.200e-21 Identity = 83/255 (32.55%), Postives = 130/255 (50.98%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP L +++Y+ ++MD+ REGR R W Y F + R R + K++ Q+ T ++ +IE+ TR+ I H + P D K N E LT L LKE Y + ++ LC EAEF Y+VLL GD L++ + P V +SPEV+ A+ ++ ++NFARFF L+R A YL ACL+ + ++R AL A+ + Q++TSF L+++ L + EE Sbjct: 256 ELRPPGVLSMTMDYLVTQIMDQ-REGR------------SRDW--------YDFVWNRTRGIRKDITQQDL-----CDTLTVSLIEKCTRFHIHCAHSMCEEP-MCSFDAKINYENLTKCLQSLKE--MYQDLANKGVLCASEAEFRGYNVLLNLHKGDILREVQQFRPDVRNSPEVKFAVQAFAALNSNNFARFFKLVRSASYLNACLLHCYFNQIRKDALRALNVAYTASAQRSTSFPLDKLVPMLLFRDAEE 481
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_013925898.1 (PREDICTED: germinal-center associated nuclear protein [Thamnophis sirtalis] >XP_013925901.1 PREDICTED: germinal-center associated nuclear protein [Thamnophis sirtalis]) HSP 1 Score: 113.6 bits (283), Expect = 3.200e-21 Identity = 84/255 (32.94%), Postives = 128/255 (50.20%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP E L +++Y+ +MDKG EG + R W Y F + R R + K++ Q+ S ++ +IE+ TR+ I HHL P D K N E +T L LKE Y + ++ CK EAEF Y+VLL GD L++ + P V +SPEVR A+ ++ ++NF +FF L++ A YL ACL+ + ++R AL+ A+ Q++T F LE I L + EE Sbjct: 677 ELRPSEVLSMTMDYLVTHIMDKG----EG---------NYREW--------YDFVWNRTRGIRKDITQQHL-----CSPLTVSLIEKCTRFHIHCSHHLCEEP-MSSFDAKINNENMTKCLQSLKE--MYQDLANKGIYCKGEAEFRGYNVLLNLNKGDILREVQQFRPSVRNSPEVRFAVQAFAALNSNNFVKFFKLVQTASYLNACLLHCYFNQIRKDALKCLNFAYTVNYQRSTIFPLENIVRMLLFRNLEE 902
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_006022113.1 (PREDICTED: germinal-center associated nuclear protein [Alligator sinensis]) HSP 1 Score: 112.8 bits (281), Expect = 5.400e-21 Identity = 83/255 (32.55%), Postives = 131/255 (51.37%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP E L +++Y+ ++MD+G EG + R W Y F + R R + K++ Q+ ++ +IE+ TR+ I HHL P D K N E LT L LKE Y + ++ CK EAEF Y+VLLT GD L++ + P V +SPEVR A+ ++ ++NF RFF L+R A YL ACL+ + ++R +AL+ A+ + Q++T F L+ + L + +E Sbjct: 690 ELRPSEVLSMTMDYLVTQIMDQG----EG---------NYREW--------YDFVWNRTRGIRKDITQQHL-----CDPLTVSLIEKCTRFHIHCAHHLCEEP-MSSFDAKINNENLTKCLQSLKE--MYQDLGNKGLYCKSEAEFRGYNVLLTLNKGDILREVQQFHPSVRNSPEVRFAVQAFAALNSNNFVRFFKLVRAASYLNACLLHCYFNQIRREALKSLNFAYTVSPQRSTVFPLDSVVRMLLFKDCQE 915
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_007432218.1 (PREDICTED: germinal-center associated nuclear protein isoform X1 [Python bivittatus]) HSP 1 Score: 112.8 bits (281), Expect = 5.400e-21 Identity = 84/255 (32.94%), Postives = 128/255 (50.20%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP E L +++Y+ +MDKG EG + R W Y F + R R + K++ Q+ S ++ +IE+ TR+ I HHL P D K N E +T L LKE Y + ++ CK EAEF Y+VLL GD L++ + P V +SPEVR A+ ++ ++NF RFF L++ A YL ACL+ + ++R AL+ A+ Q++T F L+ I L + EE Sbjct: 679 ELRPSEVLSMTMDYLVTHIMDKG----EG---------NYREW--------YDFVWNRTRGIRKDITQQHL-----CSPLTVSLIEKCTRFHIHCSHHLCEEP-MSSFDAKINNENMTKCLQSLKE--MYQDLANKGIYCKGEAEFRGYNVLLNLNKGDILREVQQFRPSVRNSPEVRFAVQAFAALNSNNFVRFFKLVQTASYLNACLLHCYFNQIRRDALKCLNFAYTVNYQRSTIFPLDNIVRMLLFRDLEE 904
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_007432219.1 (PREDICTED: germinal-center associated nuclear protein isoform X2 [Python bivittatus]) HSP 1 Score: 112.8 bits (281), Expect = 5.400e-21 Identity = 84/255 (32.94%), Postives = 128/255 (50.20%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP E L +++Y+ +MDKG EG + R W Y F + R R + K++ Q+ S ++ +IE+ TR+ I HHL P D K N E +T L LKE Y + ++ CK EAEF Y+VLL GD L++ + P V +SPEVR A+ ++ ++NF RFF L++ A YL ACL+ + ++R AL+ A+ Q++T F L+ I L + EE Sbjct: 679 ELRPSEVLSMTMDYLVTHIMDKG----EG---------NYREW--------YDFVWNRTRGIRKDITQQHL-----CSPLTVSLIEKCTRFHIHCSHHLCEEP-MSSFDAKINNENMTKCLQSLKE--MYQDLANKGIYCKGEAEFRGYNVLLNLNKGDILREVQQFRPSVRNSPEVRFAVQAFAALNSNNFVRFFKLVQTASYLNACLLHCYFNQIRRDALKCLNFAYTVNYQRSTIFPLDNIVRMLLFRDLEE 904
BLAST of NO24G01230 vs. NCBI_GenBank
Match: XP_007432220.1 (PREDICTED: germinal-center associated nuclear protein isoform X3 [Python bivittatus]) HSP 1 Score: 112.8 bits (281), Expect = 5.400e-21 Identity = 84/255 (32.94%), Postives = 128/255 (50.20%), Query Frame = 0 Query: 3 KIRPVEWLLKSVEYMEDELMDKGREGREGGRAGGRLLDSDRSWGQVTVLENYKFHFQRLRMVAKELIMQNFSYGGNISTTSIQVIERLTRYWIIYQHHLNYNPDFVRDDGKQNTEQLTNTLVPLKENYSYAHMLHQPSLCKHEAEFHSYSVLLT---GD-LKQALKGGPGVSSSPEVRLAIDVLGSVETDNFARFFALLRKAPYLMACLMAKHVERMRDKALEVWARAFNPTKQKATSFSLEEICYALCLQGEEE 254 ++RP E L +++Y+ +MDKG EG + R W Y F + R R + K++ Q+ S ++ +IE+ TR+ I HHL P D K N E +T L LKE Y + ++ CK EAEF Y+VLL GD L++ + P V +SPEVR A+ ++ ++NF RFF L++ A YL ACL+ + ++R AL+ A+ Q++T F L+ I L + EE Sbjct: 93 ELRPSEVLSMTMDYLVTHIMDKG----EG---------NYREW--------YDFVWNRTRGIRKDITQQHL-----CSPLTVSLIEKCTRFHIHCSHHLCEEP-MSSFDAKINNENMTKCLQSLKE--MYQDLANKGIYCKGEAEFRGYNVLLNLNKGDILREVQQFRPSVRNSPEVRFAVQAFAALNSNNFVRFFKLVQTASYLNACLLHCYFNQIRRDALKCLNFAYTVNYQRSTIFPLDNIVRMLLFRDLEE 318 The following BLAST results are available for this feature:
BLAST of NO24G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01230 ID=NO24G01230|Name=NO24G01230|organism=Nannochloropsis oceanica|type=gene|length=2876bpback to top protein sequence of NO24G01230.1 >NO24G01230.1-protein ID=NO24G01230.1-protein|Name=NO24G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=908bpback to top Synonyms
Publications
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