NO24G01200, NO24G01200 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G01200
Unique Name	NO24G01200
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2164
Alignment location	chr24:327234..329397 -

Link to JBrowse

Properties


Property Name	Value
Description	Chaperone protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:327234..329397 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0009987	cellular process
GO:0009628	response to abiotic stimulus
GO:0006950	response to stress

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding
GO:0031072	heat shock protein binding
GO:0005515	protein binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036869	J_dom_sf
IPR036410	HSP_DnaJ_Cys-rich_dom_sf
IPR008971	HSP40/DnaJ_pept-bd
IPR001305	HSP_DnaJ_Cys-rich_dom
IPR002939	DnaJ_C
IPR001623	DnaJ_domain

Homology

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: EWM24312.1 (chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 415.6 bits (1067), Expect = 1.700e-112
Identity = 256/323 (79.26%), Postives = 271/323 (83.90%), Query Frame = 0

Query:   75 HQSTAFLPSSNLRFSXXXXXXXXXNSYLQPFISLLPSYSSPSPSLRPSTRLYASSLPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGGXXSPFXXXXFGG--EVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            H++ AF+      FS         +S  +PF S L    S SP LRPSTRL+ASSLPRDYYERLGVTR+AKRE+IKKAYRKLALKYHPDVCKEEDASEKFK +KEAYEALIDDQKRQ+YDQFGEAGVKRGAG    SPF      G  EVDLGDIFETFFGG  XXXXXXXXXXXXXXXXX      PR GDDLRVDLSIPLRTSVFGGQEKLRINH+ETCGTC+GSGVKPGSK XXXXXXXXXX VTQVTRTPLGNFQTQSVCPECGG+GQVVEEYCG+CSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAG+KGG  G
Sbjct:   41 HRALAFV------FSPFRVSLKPLSSAQKPFTSPL---GSTSPLLRPSTRLFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAG----SPFGGGGGAGFNEVDLGDIFETFFGG--XXXXXXXXXXXXXXXXXXXXXXXPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVXXXXXXXXXXMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESG 348

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: XP_002185691.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65161.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 267.3 bits (682), Expect = 7.600e-68
Identity = 162/338 (47.93%), Postives = 194/338 (57.40%), Query Frame = 0

Query:   63 SLLLLSLLLGSFHQSTAFLPSSNLRFSXXXXXXXXXNSYLQPFISLLPSYSSPSPSLRPSTRLYAS---SLPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGV-KRGAGGGXXSPF-XXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            S +  SL L       AF+PS     S              PF+++  S +S SP    ++RL+ S   S  RD+Y  LGV R A +  IK AYRKLA +YHPD     D +EKF+E+  AYE L D   +Q YD+FGE G+    A     SPF      G EVDLGDIF++FFGG                     R +GP  GDDLR DL +  +T+VFGG+EK+RI HLETC TCTGSGVKPGSK              QVTRTPLGNFQTQ  C  C G G+ V+EYCGTC GQG  +KTKQIKV +PAGV DG KLRV+GEGD+G KGG  G
Sbjct:    5 SKVAFSLFLSWSLTGEAFVPS-----SWTPSRNPVQKDAASPFVTMSRSRASQSP-FHQTSRLFMSTRNSTERDFYAILGVGRLADKAAIKAAYRKLAKQYHPDANPGVDTTEKFQELNRAYEVLTDPVLKQKYDRFGERGLGTSAASDAEGSPFGGAGGRGQEVDLGDIFDSFFGGGSSGMGGRNGP----------RRSGPIVGDDLRFDLQVDFKTAVFGGEEKVRIRHLETCDTCTGSGVKPGSKVSMCTLCNGSGVTVQVTRTPLGNFQTQQTCATCRGTGERVDEYCGTCGGQGVNQKTKQIKVTVPAGVEDGNKLRVRGEGDSGPKGGPAG 326

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: XP_005855617.1 (chaperone protein [Nannochloropsis gaditana CCMP526] >EKU20748.1 chaperone protein [Nannochloropsis gaditana CCMP526] >EWM20659.1 chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 265.4 bits (677), Expect = 2.900e-67
Identity = 157/265 (59.25%), Postives = 189/265 (71.32%), Query Frame = 0

Query:  132 RDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVK-RGAGGGXXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            +DYY+ LGV+R+A ++EIKKAYRKLAL++HPDVCKEE A++KFKEV +AYEAL D++KR  YD+FGEAGV+ RG GGG         F  + D+GDIF++FFGG    XXXXXXXXXXXXXXX+        GDDLR+DL++P  TS+FG +EK+RINHLETC TC GSG K GS             V QV RT  G  QTQ VC +C G G+VV E CG C G G L+  KQIK+DIPAGV DG KLR+KGEGDAG +GG  G
Sbjct:  104 KDYYDILGVSRSATKQEIKKAYRKLALRWHPDVCKEEGAADKFKEVNKAYEALSDEEKRARYDRFGEAGVEGRGFGGG-------AQFVDDFDIGDIFDSFFGGAGGGXXXXXXXXXXXXXXXQ-----VVPGDDLRLDLTVPFSTSIFGAEEKVRINHLETCKTCNGSGAKKGSPSRVCGKCQGNGVVVQVQRTAFGIMQTQVVCDQCDGTGEVVAEKCGDCKGAGALQTNKQIKIDIPAGVQDGTKLRIKGEGDAGQRGGPSG 356

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: GAX27821.1 (molecular chaperone DnaJ [Fistulifera solaris])

HSP 1 Score: 252.3 bits (643), Expect = 2.500e-63
Identity = 166/294 (56.46%), Postives = 197/294 (67.01%), Query Frame = 0

Query:  112 YSSPSPSLRPSTRLYA-----SSLPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGG--XXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTA---GPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            Y+  +PS   +TRL++     S+  RD+Y  LGV+R A   +IK+AYRKLA +YHPD    +D +EKF+E+  AYE L D   +Q YD FGE G+   A       SPF    F  EVDLGDIF+TFFG           XXXXXXXXX RRTA   GP  GDDLR DL I  +T+VFGG++K++I HLETC TC G+GVKPG+ XXXXXXXXXXXX  QVTRTPLGNFQTQ       G GQ VEEYCG+C GQG  +KTKQIKV +P GV +G KLRV+GEGDAG  GG  G
Sbjct:   36 YTHHAPSTTSTTRLFSTRNRNSTNNRDFYAILGVSRNADAAQIKQAYRKLAKQYHPDANPGQDTTEKFQEINRAYEVLTDPNLKQKYDMFGEQGIGTSAASDSTAGSPFGGGGFTQEVDLGDIFDTFFG-----------XXXXXXXXXXRRTARQRGPVIGDDLRFDLEIDFKTAVFGGEQKVKIRHLETCDTCGGNGVKPGAXXXXXXXXXXXXXXMQVTRTPLGNFQTQQTXXXXRGTGQRVEEYCGSCGGQGLNQKTKQIKVTVPPGVENGNKLRVRGEGDAGPNGGPAG 318

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: CBN79951.1 (Heat shock protein 40 [Ectocarpus siliculosus])

HSP 1 Score: 250.4 bits (638), Expect = 9.700e-63
Identity = 173/285 (60.70%), Postives = 203/285 (71.23%), Query Frame = 0

Query:  111 SYSSPSPSLRPSTRLYASSLPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGGXXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            S SS + S RPS +  A  + RD YE LGV R A + ++K A+RKLA +YHPDV     ASEKF E+  AY  L DD++RQ YDQFGEA       G XX   XXXX   +VDL DIF++          XXXXXXXXXXXXX     GP  GDDLRVDL +  +++ FG +EK+RI HLETC TC+GSGVKPG+K XXXXXXXXXXX  Q TRTPLG FQTQ+ CP C G G+VVEEYCG+CSGQG +EKTKQ+KV +PAGV+DG KLRVKGEGDAGAKGG +G
Sbjct:   84 SSSSRARSSRPS-QGGALRMGRDLYEVLGVDRGADKSQLKSAFRKLAREYHPDVNDSPGASEKFNEISTAYSVLNDDEQRQRYDQFGEA-------GXXXXXXXXXXXXXQVDLSDIFDS----------XXXXXXXXXXXXXXXXXXGPVRGDDLRVDLDLDFKSACFGVEEKVRIRHLETCNTCSGSGVKPGAKVXXXXXXXXXXXXIQATRTPLGAFQTQTTCPTCRGTGEVVEEYCGSCSGQGVVEKTKQVKVKVPAGVDDGNKLRVKGEGDAGAKGGPVG 350

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: GAX12611.1 (molecular chaperone DnaJ [Fistulifera solaris])

HSP 1 Score: 243.8 bits (621), Expect = 9.000e-61
Identity = 164/276 (59.42%), Postives = 188/276 (68.12%), Query Frame = 0

Query:  122 STRLYASSLPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGG--XXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            STR   S+  RD+Y  LGV+R A   +IK+AYRKLA +YHPD    +D +EKF+E+  AYE L D   +Q YD FGE G+   A       SPF    F  EVDLGDIF++F        XXXXXXXXXXXXXX  R  GP  GDDLR DL I  +T+VFGG+EK+RI HLETC TC G+GVKPG+ XXXXXXXXXXXX  QVTRTPLGNFQTQ         GQ VEEYCGTC GQG  +KTKQIKV +P GV +G KLRV+GEGDAG  GG  G
Sbjct:   51 STRNRNSTNNRDFYAILGVSRNADAAQIKQAYRKLAKQYHPDANPGQDTTEKFQEINRAYEVLTDPSLKQKYDMFGEQGIGTSAASDSTAGSPFGGGGFSQEVDLGDIFDSF--------XXXXXXXXXXXXXXTARQRGPVIGDDLRFDLEIDFKTAVFGGEEKVRIRHLETCDTCGGNGVKPGAXXXXXXXXXXXXXXMQVTRTPLGNFQTQQTXXXXXXXGQRVEEYCGTCGGQGLNQKTKQIKVTVPPGVENGNKLRVRGEGDAGPNGGPAG 318

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: WP_002756045.1 (molecular chaperone DnaJ [Microcystis aeruginosa] >CCH94375.1 Chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK [Microcystis aeruginosa PCC 9432])

HSP 1 Score: 240.0 bits (611), Expect = 1.300e-59
Identity = 139/266 (52.26%), Postives = 170/266 (63.91%), Query Frame = 0

Query:  130 LPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGGXXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            +P DYYE LGV+R A +E+IK+AYR+LA KYHPDV KE  A E+FKE+  AYE L + + R  YD+FGEAGV  GA G     F     GG     DIFET F G                    RR  GP  G+DLR+D  +  R +VFGG++++RI HLETC TC GSG +PG+   XXXXXXXXX V + TRTP G F   SVCP C GAG+V+EE C  C G GR ++TK++K+ IPAGV++G KLRV  EGDAG KGG  G
Sbjct:    1 MPTDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAG-----FDPDNMGG---FADIFETIFSG----------FGGMGGQTTARRRTGPTRGEDLRLDFKLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTGSRXXXXXXXXXQVRRATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRKQETKKLKITIPAGVDNGMKLRVAREGDAGLKGGPPG 248

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: WP_002795599.1 (molecular chaperone DnaJ [Microcystis aeruginosa] >B0JW23.1 RecName: Full=Chaperone protein DnaJ >BAG04766.1 heat shock protein 40 [Microcystis aeruginosa NIES-843] >CCI24356.1 Chaperone protein dnaJ [Microcystis aeruginosa PCC 9809])

HSP 1 Score: 239.2 bits (609), Expect = 2.200e-59
Identity = 139/266 (52.26%), Postives = 169/266 (63.53%), Query Frame = 0

Query:  130 LPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGGXXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            +P DYYE LGV+R A +E+IK+AYR+LA KYHPDV KE  A E FKE+  AYE L + + R  YD+FGEAGV  GA G     F     GG     DIFET F G                    RR  GP  G+DLR+D  +  R +VFGG++++RI HLETC TC GSG +PG+   XXXXXXXXX V + TRTP G F   SVCP C GAG+V+EE C  C G GR ++TK++K+ IPAGV++G KLRV  EGDAG KGG  G
Sbjct:    1 MPTDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAG-----FDPDNMGG---FADIFETIFSG----------FGGMGGQATARRRTGPTRGEDLRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRXXXXXXXXXQVRRATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLRVAREGDAGLKGGPPG 248

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: WP_061431019.1 (molecular chaperone DnaJ [Microcystis aeruginosa] >KXS93210.1 molecular chaperone DnaJ [Microcystis aeruginosa NIES-88])

HSP 1 Score: 239.2 bits (609), Expect = 2.200e-59
Identity = 139/266 (52.26%), Postives = 169/266 (63.53%), Query Frame = 0

Query:  130 LPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGGXXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            +P DYYE LGV+R A +E+IK+AYR+LA KYHPDV KE  A E FKE+  AYE L + + R  YD+FGEAGV  GA G     F     GG     DIFET F G                    RR  GP  G+DLR+D  +  R +VFGG++++RI HLETC TC GSG +PG+   XXXXXXXXX V + TRTP G F   SVCP C GAG+V+EE C  C G GR ++TK++K+ IPAGV++G KLRV  EGDAG KGG  G
Sbjct:    1 MPTDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAG-----FDPDNMGG---FADIFETIFSG----------FGGMGGQATARRRTGPTRGEDLRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRXXXXXXXXXQVRRATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLRVAREGDAGLKGGPPG 248

[Close]

BLAST of NO24G01200 vs. NCBI_GenBank
Match: WP_104397712.1 (molecular chaperone DnaJ [Microcystis aeruginosa] >GBE76144.1 heat shock protein 40 [Microcystis aeruginosa NIES-87])

HSP 1 Score: 239.2 bits (609), Expect = 2.200e-59
Identity = 139/266 (52.26%), Postives = 169/266 (63.53%), Query Frame = 0

Query:  130 LPRDYYERLGVTRAAKREEIKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAGVKRGAGGGXXSPFXXXXFGGEVDLGDIFETFFGGQXXXXXXXXXXXXXXXXXXRRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSGVKPGSKXXXXXXXXXXXXVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMG 396
            +P DYYE LGV+R A +E+IK+AYR+LA KYHPDV KE  A E FKE+  AYE L + + R  YD+FGEAGV  GA G     F     GG     DIFET F G                    RR  GP  G+DLR+D  +  R +VFGG++++RI HLETC TC GSG +PG+   XXXXXXXXX V + TRTP G F   SVCP C GAG+V+EE C  C G GR ++TK++K+ IPAGV++G KLRV  EGDAG KGG  G
Sbjct:    1 MPTDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAG-----FDADNMGG---FADIFETIFSG----------FGGAGGQATARRRTGPTRGEDLRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRXXXXXXXXXQVRRATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLRVAREGDAGLKGGPPG 248

The following BLAST results are available for this feature:

BLAST of NO24G01200 vs. NCBI_GenBank

BLAST of NO24G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24312.1	1.700e-112	79.26	chaperone protein [Nannochloropsis gaditana]	[more]
XP_002185691.1	7.600e-68	47.93	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
XP_005855617.1	2.900e-67	59.25	chaperone protein [Nannochloropsis gaditana CCMP52...	[more]
GAX27821.1	2.500e-63	56.46	molecular chaperone DnaJ [Fistulifera solaris]	[more]
CBN79951.1	9.700e-63	60.70	Heat shock protein 40 [Ectocarpus siliculosus]	[more]
GAX12611.1	9.000e-61	59.42	molecular chaperone DnaJ [Fistulifera solaris]	[more]
WP_002756045.1	1.300e-59	52.26	molecular chaperone DnaJ [Microcystis aeruginosa] ...	[more]
WP_002795599.1	2.200e-59	52.26	molecular chaperone DnaJ [Microcystis aeruginosa] ...	[more]
WP_061431019.1	2.200e-59	52.26	molecular chaperone DnaJ [Microcystis aeruginosa] ...	[more]
WP_104397712.1	2.200e-59	52.26	molecular chaperone DnaJ [Microcystis aeruginosa] ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL040	nonsL040	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR030	ncniR030	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR027	ngnoR027	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002871	NSK002871	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO24G01200.1	NO24G01200.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|626028	gene_7346	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100047g4	gene6146	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO24G01200.1	NO24G01200.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO24G01200 ID=NO24G01200|Name=NO24G01200|organism=Nannochloropsis oceanica|type=gene|length=2164bp
ATGGACACGCAAGTCCAAGgtacatcgaaagcacaagcacattactacgt
gcttgtgctctttcctgcaccttgtggtcataatccccgtcattgacctt
gtcctttccttccacacctgactagGCTACTCTCTTACTCCTTCGAGGAG
CAGCAGCAGCAGCAGCGGCGGCAGCAAGGAGCTACAGCAACTACAGCAAG
CGGCGATTACTAGTACTTCCATCATAGCAACAGGAGTTTCAGCAGCCAAT
ATGAGAAAACAACAAAGACCAGTTGACGGCCCCGCCGTCCCGTCCCTGCT
ACTCCTCAGCCTCCTCCTGGGCTCCTTCCACCAAAGCACCGCCTTCCTCC
CCTCTTCTAACCTCCGCTTCTCCTCCTCCTCCTCCTCCTCTTCCTCGTAC
AATTCCTATCTCCAACCATTCATTTCCCTCCTCCCCTCCTACTCCTCCCC
TTCTCCGTCCCTCCGTCCCTCGACCCGCCTCTACGCCTCGTCCCTCCCCC
GCGACTACTACGAGCGCCTCGGTGTCACCCGCGCTGCCAAGCGCGAAGAA
ATCAAAAAAGCCTATAGAAAACTCGCATTGAAGTACCACCCCGACGTGTG
TAAAGAAGAAGATGCTTCCGAGAAATTCAAGGAGGTAAAAGAGGCGTATG
AGGCCCTGATTGATGATCAGAAGAGACAGATGTACGACCAATTTGGGGAG
GCAGGGGTGAAACGAGGGGCCGGCGGAGGAGGAGGGTCTCCTTTCGGTGG
CGCGGGCTTTGGAGGGGAGGTTGACTTGGGTGATATTTTTGAGACCTTTT
TCGGGGGGCAGGGGGGAGGGAGGGGGGGAGGGAGGGGGGGGCCGGGGGCA
GCGGGACCCGGGGCGAGGAGGAGGACAGCAGGGCCTCGGGCGGGGGATGA
TTTGCGGGTGGACTTGAGCATCCCGTTGAGGACGAGTGTGTTTGGGGGTC
AGGAGAAGCTCCGAATCAACCACTTGGAGACATGTGGGACGTGCACGgtg
aggagggaaagatggatggggggagggagggaaagagggagggtgggaaa
gagggagggtgagtgggtgtgccgattggatgtggatgtgaatatggtag
ttggtgggtgggtcgatgtatttcatgagctcaaattaagtaaaagaaac
atggtaatgagaaaaaccaaaagaaatctacgtgctcactcaccaatctt
atgttttcctctcccgctctttcttctacctacccacagGGCTCGGGTGT
CAAGCCCGGGAGCAAGGTAAACACGTGTAAGACCTGCCGTGGCAGCGGCG
TAGTTACCCAGGTGACTCGCACGCCTCTAGGGAACTTCCAGACCCAGAGT
GTGTGTCCGGAATGCGGGGGGGCTGGCCAGGTGGTTGAAGAGTACTGTGG
TACCTGCTCGGGGCAAGGACGATTGGAGAAGACAAAGCAGATTAAGGTTG
ACATACCAGCGGGGGTGAATGACGGGCAGAAGCTGCGCGTGAAGGGGGAG
GGGGACGCGGGGGCCAAGGGGGGGAGAATGGGGACCTGTATATCTTCATC
GGGGTAGAGAAAGACCCGGTGTTTAGGAGGGACGGGACGGACATTTATTC
GGACATAAAAGTCAGTTACATCGATGCCATTCTGGGGACCAAAGTGAAGG
TGGGCGTGATTGACGGGGATGCGGAGATTGCAATCAAGGAAGGGACGCAG
GCCGGGGCGGTGTTGAGATTGAAGGGGCGGGGGGTGCCTAAGTTGATGAG
CGGCGAGGGGGGGCACGGGGGGATCATTACTTCACGGTGGGCGTTGAGAT
CCCCACGACCTTGTCGGAGGAAGAGAGGGAGCTGGTGGAGGGTTTGAGGA
AGGAGAGAAAGGAGAAGGCTAAGGGGGACGGGGAGGGGAAGGGAGGCTTC
TTCAATTTCATATGATGAGGGGGAGGAGGGAGAGGGGAGGGGGGGAGGAG
AAACTAGGATGTGGTTTGAAAAGGACGAATGACGATAAATATGTGATGAG
GACGACTTTGAGGAGGAGGAGGAAGAGATGGAGGTCCAAAGGGACAGAAC
GGGAGAGTACAAGAAAACAGGGGAGGGGTTGAGGGAGGGGATTAGAGGGC
CACAGGCGTGGATTGAGTCGGGAAAGCAATGAAAGTTAAAAAAAACACGT
GATCTGAATCAACA

protein sequence of NO24G01200.1

>NO24G01200.1-protein ID=NO24G01200.1-protein|Name=NO24G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MDTQVQGYSLTPSRSSSSSSGGSKELQQLQQAAITSTSIIATGVSAANMR
KQQRPVDGPAVPSLLLLSLLLGSFHQSTAFLPSSNLRFSSSSSSSSSYNS
YLQPFISLLPSYSSPSPSLRPSTRLYASSLPRDYYERLGVTRAAKREEIK
KAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMYDQFGEAG
VKRGAGGGGGSPFGGAGFGGEVDLGDIFETFFGGQGGGRGGGRGGPGAAG
PGARRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLETCGTCTGSG
VKPGSKVNTCKTCRGSGVVTQVTRTPLGNFQTQSVCPECGGAGQVVEEYC
GTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKGGRMGTCISS
SG*

Synonyms

Publications