NO24G01140, NO24G01140 (gene) Nannochloropsis oceanica

Overview
NameNO24G01140
Unique NameNO24G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1803
Alignment locationchr24:316729..318531 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:316729..318531 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01140.1NO24G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01140.1NO24G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01140 ID=NO24G01140|Name=NO24G01140|organism=Nannochloropsis oceanica|type=gene|length=1803bp
ATGAAGGGGGGCGGTTTCCTCCTTTTCAAGCTCTTCCCCAACCATTCTCC
CTCCCTGCCTACCTCCACCTCCACCTCGTCTTTTCACGCAACGATCGCGC
TCCTCGGTCTGATATCCGACGTTCAAATGCGCAAGGAGGCAGGGTTGCAG
GTTAGCGGGCGAGAAGGGAGAGGAAGAGGATGTGGAAATCGTGGAGGAGG
AGGGGGAAAGGTTGGGAGGGAGGGAGGGAGGGAAGGGTTCAAAACAGTAG
CGCTTGCATTAGCGGCATGTGCCTTGCTGGGTGTGAGTGCTTTGGTGCTG
CTGCGGTACTACCAGACAGCAGCTGCAGCAGCAGCAGAAGCAGTAGAAGC
AACAGGAGGAGGGGAAGAGAGGGATGGAGGGAGGAAGGGAGGGACGGAGA
GGCGACAGAGCACGATCATAGGCTTAAAGAGGAGGAAGAGAAGGCGGCGG
GCGCTAGAGCTGGAGGAAGAGGAGCAGGAGGAAGAAAAGCATGAACAGCA
ACACCAGCCACAGCACCAGCACCAGCATCAGCACCAGCAGCATCAGCACC
AGCAACACCACCATCAGCATCAGCACCAGCAACGGGAGCCGATGGAAGAG
AAATGGGAGGGACACGAAGCAGGAATGGGAGGGAGGGAGGGAGGGATCGT
TTGCGATTCCTTGAGTCTAGCTGCCTCCTCTTCCTCCTACCCCTCCTCCT
CTTCTTTCTTCTCCTCCTCGTCTTCCCACCCCTCGTCCTCCCTCCTGCCC
TCCCCCTCCTCCTCGCTCTCCCTTGATCCGGCAGTGGAAGACGTGGATCC
ACTCCTATGGCGCGAAGGAGATCGGgtaagtaacaccaccgcccgcccgc
ccttcctccctccctccccctcccccaaaattatcagcaaaaatcttttc
gatcacatccctccctccctccctccctcctttcctctttccctccctct
ctcgattacccttctatcatgactttcttttctcttcctccccttctcca
tccgtcccctttctccctccccatcctcctccccaacagATGATGGGCCT
AAGAGATATGCAAGGCCTCGATGGGGAGGAAGGGGCCGAGGAAGGGAGGG
AGGAAGAGGGAGACGAGTGGACGATGGTAGGATTTTCGGACGTGGAAAGA
ATGGAGGGAGGAAGAGAGGGAAGAAGAGAGGGAGGGAGGGGATCGGGTCA
GTCTTAAAGGGGGGATGAGGAGAGAGCATTACGTGAATATATTCTGGGAC
ACGGGATGGGGGGAAAAAAGGGAGAGAGGGAGGGAAGAAGGACGCAGTGT
AAAAAAGAAGTCGGCCACGGCAGCCTTGTAAGAAAGTGGTGATAGTTACG
GGGATGATGGGACGAAGGGAAAGGGGCAGGGAAGGGGGATGTTGATATCT
ATCGGCGCGGAGGGTGGGAGGGAGGGAGGGGGAGGGAGGGAAGGAGGGAA
GGAAGGACAAAGGGCAACCACCACTCGCGTAAATAGAAGAAAGGGTGGGA
GTGGATCTGTCAACGCCGATGATAAAACAAGGCAGGGAGGGAGGGAGGGA
GGGAGGAAGAGGGAGGAGCAGCAAAACCTATCGCCTCTTGTCGCGCTTCA
TGTTGCCCAGAAAGGAAGGGGAGAAGGAGGGAGGGGGGCAGGGTTATACA
TGCTGAGCACCAACACAGGAAAGAGAGAAAGAAGAGAAAGGAGAGGGAGA
AGAGAAGAGAAAGAGGAGGAGACCGAAAAAAGGAAGAGTCAAGACAAGAA
ATAAACAAAGGATGAAAAGATGTCAGAAGGCTCGCTTGAGGGAGAGAGGG
AGG
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protein sequence of NO24G01140.1

>NO24G01140.1-protein ID=NO24G01140.1-protein|Name=NO24G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MKGGGFLLFKLFPNHSPSLPTSTSTSSFHATIALLGLISDVQMRKEAGLQ
VSGREGRGRGCGNRGGGGGKVGREGGREGFKTVALALAACALLGVSALVL
LRYYQTAAAAAAEAVEATGGGEERDGGRKGGTERRQSTIIGLKRRKRRRR
ALELEEEEQEEEKHEQQHQPQHQHQHQHQQHQHQQHHHQHQHQQREPMEE
KWEGHEAGMGGREGGIVCDSLSLAASSSSYPSSSSFFSSSSSHPSSSLLP
SPSSSLSLDPAVEDVDPLLWREGDRMMGLRDMQGLDGEEGAEEGREEEGD
EWTMVGFSDVERMEGGREGRREGGRGSGQS*
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Synonyms
Publications