NO24G01120, NO24G01120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01120 vs. NCBI_GenBank
Match: CBN77038.1 (6-phosphogluconate dehydrogenase NAD-binding [Ectocarpus siliculosus]) HSP 1 Score: 167.5 bits (423), Expect = 7.800e-38 Identity = 115/310 (37.10%), Postives = 161/310 (51.94%), Query Frame = 0 Query: 46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSR-----VSAILEAGKGKIAAEYIQ--AAPSLEALSKECGTICVSLPNEGI----GEKVFHSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTML-QRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQ 344 L +G VGLG MGSGM N+A GF L ++DA++ +TQ L G G ++ ++ +P+ L+ + +CV + + GE ++ S ++ ++DHGTVS F + + + G +LDAP+SGGP GA + TLSIMVGG E LP+LE MGS + HMG GAG AAKL+NQ L ++ AA EAY L+++LG+SD L LL SWG+S ML Q G LL+ E D + L S AP+R KD +++ A E G L AQ Sbjct: 2 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADKI--IVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKGEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVIINTVAACEAYVLARRLGLSDMGKLKALLGASWGHSQMLDQVLGDLLKVEEAGDDV---------------EVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQ 294
BLAST of NO24G01120 vs. NCBI_GenBank
Match: OUU77370.1 (hypothetical protein CBC30_01625 [Chloroflexi bacterium TMED70]) HSP 1 Score: 164.5 bits (415), Expect = 6.600e-37 Identity = 114/328 (34.76%), Postives = 167/328 (50.91%), Query Frame = 0 Query: 46 LPIGFVGLGNMGSGMINNLASCGFSLRLF--DADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEG------IGEKVFHSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVV 366 + +GF+GLGNMG GM NL S G L + + +K+K + A + SL L + I LP+ +GE S +S ++DH TV + +K+CY+ +G +LDAP+SGGP GA TLSIMVGG ++F S+P E MG+ + MG SG GTA KLINQLLT VH A+AEA +L+ + D + + +L S+G S ML+RS ++ +D EG S P RN KD S+IE+ G++ ++LPLT + + K E G E D+A +++++ Sbjct: 1 MKVGFIGLGNMGQGMAXNLLSKGADLNVXTRNPEKIKNMEKKGA--------------KGCYSLAQLVESSEIIFTCLPDINTSLDIIVGESGIMSFIS----DESKIIVDHSTVDIATSKKCYEXVKTRGSNFLDAPISGGPVGAKDGTLSIMVGGDSDSFDKSMPYFEMMGTTIKRMGDSGTGTAMKLINQLLTAVHTTASAEALSLANAAKV-DIDSAMEILMVSFGFSRMLERSAPII-----RDRKFEG-----------------SSVPARNIHKDISIIEKMGQDLSVKLPLTEVSKKLYDLLKNE-GKEMDDMAGIIQII 286
BLAST of NO24G01120 vs. NCBI_GenBank
Match: PCI17572.1 (3-hydroxyisobutyrate dehydrogenase [SAR202 cluster bacterium]) HSP 1 Score: 153.3 bits (386), Expect = 1.500e-33 Identity = 103/321 (32.09%), Postives = 163/321 (50.78%), Query Frame = 0 Query: 48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVF---HSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVV 366 +GF+GLG MG M L + GF L + + ++Q +V I AG +AA S+ + +E + LP+ E++F +++ P ++ ++DH TV + +K C +G +LDAP+SGG + AA TL IM GG EA+ +LP MG+ V H+GP+G GT KL+NQLL G+H AAAEA + K G +D A + +++ WG+S ML R+ ++ + F T ++ FLKD +I++ +E G+E+P A A F + + G + D AA V ++ Sbjct: 6 VGFIGLGRMGLPMSYRLLAAGFDLTVHN----RSQXKVKEIASAG--------ARAATSVVEVVREADVVLACLPDVATSEEIFLGDDGIVANAKPGQV--LVDHSTVGMATSKACAAAAEAKGAFFLDAPISGGTERAADGTLVIMAGGPVEAYQRALPSFXAMGTTVRHIGPTGTGTVVKLVNQLLVGIHSVAAAEAMVVGAKAG-ADPALVFEVVNSGWGHSFMLDRNXPVMLDRD-------------------FDGARTQ---IKVFLKDMGLIQDLTKELGIEMP-GANLAYSFVKQAVDKGFGDMDSAAAVMLL 288
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_066388369.1 (NAD(P)-dependent oxidoreductase [Bacillus mesonae]) HSP 1 Score: 151.8 bits (382), Expect = 4.400e-33 Identity = 92/232 (39.66%), Postives = 140/232 (60.34%), Query Frame = 0 Query: 46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVF---HSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR 275 + IGF+G G MGS M L G+ L++++ +T+ +V A++E G AE+ A ++ +L+ EC IC L G E+V+ H ++ P + ID TV +K +++ A++GI YLDAPVSGGP+GA TL+I+VGG R+AF +LE +G+ + ++GPSG+G+ AKLINQ L VH AA+EA G+ D+ LL++L S+G+S ML+R Sbjct: 1 MKIGFIGTGVMGSRMAGRLLINGYQLKVYN----RTKEKVQALVEKG-----AEH---AETIASLAGECDIICTCLSMPGDVEEVYLGGHGIVKHARPGLI--CIDFTTVGADTSKAVFEKAAERGIDYLDAPVSGGPEGAENGTLTIIVGGDRQAFEKVSSVLEALGATIEYLGPSGSGSIAKLINQYLVAVHSLAASEAMVTGAAFGL-DSEKLLNILKVSYGDSRMLRR 217
BLAST of NO24G01120 vs. NCBI_GenBank
Match: ACZ40755.1 (6-phosphogluconate dehydrogenase NAD-binding protein [Sphaerobacter thermophilus DSM 20745]) HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32 Identity = 102/324 (31.48%), Postives = 161/324 (49.69%), Query Frame = 0 Query: 48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRL-HTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVVRGFEG 371 +GF+GLG MG M NL G+ +V +R A++E +++ E + A S +++ + LP E+V+ P +R ++D TV +++ Y ++G +LDAPVSGGP GA TL+IMVGG ++ ++P+L+ +G+ + H+GPSG+GT KL+NQLL G+++ A AEA K G +D ALL +L S+G+S ML R L+ + + + G P+ LKD +I E G + L L A F+ G+ GL + D+ A+VK + G Sbjct: 3 LGFIGLGKMGKPMTRNLLRAGY--------EVTIHNRSRAVVE----ELSGEGARPATSPREVAEAADLVITCLPTPATVEEVYLGEDGLIPAAREGQILVDCSTVGPALSRQLYAAAQERGAGFLDAPVSGGPAGAESATLTIMVGGDKDVLDRAMPVLQALGTNIHHVGPSGSGTVVKLVNQLLVGINMAAVAEAVVFGVKAG-ADPQALLDVLQSSFGSSRMLTRGLPLIMERQFE-----------------------GGTPINLILKDLGLIHEVGSALDVRLMLGAVAQEAFKEGRAL-GLGDEDMVALVKPLERLAG 289
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_052295408.1 (NAD(P)-dependent oxidoreductase [Sphaerobacter thermophilus]) HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32 Identity = 102/324 (31.48%), Postives = 161/324 (49.69%), Query Frame = 0 Query: 48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRL-HTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVVRGFEG 371 +GF+GLG MG M NL G+ +V +R A++E +++ E + A S +++ + LP E+V+ P +R ++D TV +++ Y ++G +LDAPVSGGP GA TL+IMVGG ++ ++P+L+ +G+ + H+GPSG+GT KL+NQLL G+++ A AEA K G +D ALL +L S+G+S ML R L+ + + + G P+ LKD +I E G + L L A F+ G+ GL + D+ A+VK + G Sbjct: 4 LGFIGLGKMGKPMTRNLLRAGY--------EVTIHNRSRAVVE----ELSGEGARPATSPREVAEAADLVITCLPTPATVEEVYLGEDGLIPAAREGQILVDCSTVGPALSRQLYAAAQERGAGFLDAPVSGGPAGAESATLTIMVGGDKDVLDRAMPVLQALGTNIHHVGPSGSGTVVKLVNQLLVGINMAAVAEAVVFGVKAG-ADPQALLDVLQSSFGSSRMLTRGLPLIMERQFE-----------------------GGTPINLILKDLGLIHEVGSALDVRLMLGAVAQEAFKEGRAL-GLGDEDMVALVKPLERLAG 290
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_095306175.1 (NAD(P)-dependent oxidoreductase [Bacillus sp. 7504-2] >PAE22473.1 3-hydroxyisobutyrate dehydrogenase [Bacillus sp. 7504-2]) HSP 1 Score: 148.7 bits (374), Expect = 3.800e-32 Identity = 94/230 (40.87%), Postives = 132/230 (57.39%), Query Frame = 0 Query: 46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRLHTV-IDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR 275 + IGF+GLG MGS + + G L +++ KT++ + A Q A + +LSKEC IC L E +F + + P +R TV ID TV V ++R Y + + GI+YLDAPVSGGP+G +RTL+IMVGG +EAF LP+L+ + ++G SG+G+AAKLINQ L VH AA+EA G+ D L+HLL+ S+G S ML+R Sbjct: 1 MKIGFIGLGVMGSRIAKKMLEGGNQLVVYNRTVTKTEN------------LVALGAQRANDIASLSKECEIICSCLSMPEDCEHIFQN--TVLPYARTGTVCIDFSTVGVKTSQRIYTQAKENGISYLDAPVSGGPEGVEQRTLTIMVGGEQEAFVKVLPLLKLFAETIEYLGESGSGSAAKLINQYLVAVHSVAASEAMVAGASFGL-DPEQLVHLLTASYGTSRMLER 215
BLAST of NO24G01120 vs. NCBI_GenBank
Match: OUM94170.1 (3-hydroxyisobutyrate dehydrogenase [Thermobacillus sp. ZCTH02-B1]) HSP 1 Score: 145.2 bits (365), Expect = 4.100e-31 Identity = 94/228 (41.23%), Postives = 130/228 (57.02%), Query Frame = 0 Query: 48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRLHTVI-DHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR 275 IGF+GLGNMG M NL GF + + K + +AG G+I Q L+ E + LP E+V+ S P R ++ D TV ++R Y+ A +GI +LDAPVSGG GAA+ TLSIMVGG R AF ++P E MG+++ H+GPSG+G+A KLINQL+ G+H QA +EA AL ++ GI D A L+ +L S+ +S +L R Sbjct: 4 IGFIGLGNMGLPMAANLVKAGFEVYGLNRSKGAEEK----FAQAG-GRIGLTRAQ-------LAAEMDMVITCLPMPADVEEVYLSEDGLIPNGRPGLLLADCSTVGPELSRRLYEAAAARGIAFLDAPVSGGTVGAAEGTLSIMVGGDRGAFDRAMPAFEAMGNMIRHVGPSGSGSAVKLINQLMVGIHTQAVSEALALGRRAGI-DEALLVDILMASFASSRILGR 218
BLAST of NO24G01120 vs. NCBI_GenBank
Match: GBD16014.1 (2-hydroxy-3-oxopropionate reductase [bacterium HR26]) HSP 1 Score: 145.2 bits (365), Expect = 4.100e-31 Identity = 106/332 (31.93%), Postives = 161/332 (48.49%), Query Frame = 0 Query: 48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVF---HSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVVRGFEGGKEEGR 377 +G +GLG MG M NL GF++ V +SR ++A E AA S ++++ + SLP E+V+ + L+ P ++ +ID TVS G ++R Y ++ +LDAPVSGGP GA TL+IMVGG E ++P+ + +G + H+GPSGAG+ KL+NQLL +++ AEA K G +D LL ++ S+G S ML+R+ L+ + + Q G P+ LKD +I E G+E L L A F+ + G +E D+ A+ K V G + GR Sbjct: 3 VGVIGLGKMGKPMTRNLLKAGFTV------VVHNRSR------GPVDELAREGAVAAWSPAEVAQQADVVVTSLPTPASVEEVYLGENGLIGAARPGQV--LIDTSTVSPGLSRRLYAAAKERAAGFLDAPVSGGPAGAESATLTIMVGGDAEVVEQAMPVFQALGKNIHHVGPSGAGSVVKLVNQLLVAINMAGVAEAIVFGVKAG-ADPQVLLDVIKTSFGGSRMLERALPLVMERQFQ-----------------------PGTPVNLILKDLGLIHEVGKELDTRLLLGALAQEVFKEARAAGFGDE-DMVALFKPVERLAGVEVRGR 295
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_015256088.1 (beta-hydroxyacid dehydrogenase [Thermobacillus composti] >AGA59358.1 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase [Thermobacillus composti KWC4]) HSP 1 Score: 143.7 bits (361), Expect = 1.200e-30 Identity = 98/242 (40.50%), Postives = 133/242 (54.96%), Query Frame = 0 Query: 46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHS---LLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR--SGALLQQA 283 + IGF+GLGNMG M NL GF + + K + +AG GK Q L+ E + LP E V+ S L+ P L ++D TV +R + A +GI +LDAPVSGG GAA+ TLSIMVGG REAF + P E MG + ++GPSG+G+ KLINQL+ G+H QA +EA AL +K G+ D AAL+ +L S+ +S ML R SG + ++A Sbjct: 1 MKIGFIGLGNMGLPMAINLVKAGFEVYGLNRSKGAEEK----FAQAG-GKTGLTRAQ-------LAAEMDMVITCLPMPADVEAVYTSEDGLIPNGRPGLL--LVDCSTVGPDLNRRLFDAAAARGIAFLDAPVSGGTVGAAEGTLSIMVGGEREAFDRAKPAFEAMGKQIYYVGPSGSGSVVKLINQLMVGIHTQAVSEALALGRKAGL-DEAALVDILMASFASSRMLGRHYSGFIAKEA 227 The following BLAST results are available for this feature:
BLAST of NO24G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01120 ID=NO24G01120|Name=NO24G01120|organism=Nannochloropsis oceanica|type=gene|length=2402bpback to top protein sequence of NO24G01120.1 >NO24G01120.1-protein ID=NO24G01120.1-protein|Name=NO24G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bpback to top Synonyms
Publications
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