NO24G01120, NO24G01120 (gene) Nannochloropsis oceanica

Overview
NameNO24G01120
Unique NameNO24G01120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2402
Alignment locationchr24:310517..312918 -

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Properties
Property NameValue
Description6-phosphogluconate dehydrogenase NAD-binding
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:310517..312918 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0004616phosphogluconate dehydrogenase (decarboxylating) activity
GO:0051287NAD binding
GO:0050661NADP binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR0089276-PGluconate_DH_C-like
IPR029154NADP-bd
IPR0061156PGDH_NADP-bd
Homology
BLAST of NO24G01120 vs. NCBI_GenBank
Match: CBN77038.1 (6-phosphogluconate dehydrogenase NAD-binding [Ectocarpus siliculosus])

HSP 1 Score: 167.5 bits (423), Expect = 7.800e-38
Identity = 115/310 (37.10%), Postives = 161/310 (51.94%), Query Frame = 0
Query:   46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSR-----VSAILEAGKGKIAAEYIQ--AAPSLEALSKECGTICVSLPNEGI----GEKVFHSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTML-QRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQ 344
            L +G VGLG MGSGM  N+A  GF L ++DA++ +TQ           L  G G ++  ++    +P+   L+ +   +CV    + +    GE    ++ S     ++  ++DHGTVS  F +   +   + G  +LDAP+SGGP GA + TLSIMVGG  E     LP+LE MGS + HMG  GAG AAKL+NQ L  ++  AA EAY L+++LG+SD   L  LL  SWG+S ML Q  G LL+  E  D +                 L  S AP+R   KD +++  A  E G    L     AQ
Sbjct:    2 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADKI--IVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKGEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVIINTVAACEAYVLARRLGLSDMGKLKALLGASWGHSQMLDQVLGDLLKVEEAGDDV---------------EVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQ 294          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: OUU77370.1 (hypothetical protein CBC30_01625 [Chloroflexi bacterium TMED70])

HSP 1 Score: 164.5 bits (415), Expect = 6.600e-37
Identity = 114/328 (34.76%), Postives = 167/328 (50.91%), Query Frame = 0
Query:   46 LPIGFVGLGNMGSGMINNLASCGFSLRLF--DADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEG------IGEKVFHSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVV 366
            + +GF+GLGNMG GM  NL S G  L +   + +K+K   +  A              +   SL  L +    I   LP+        +GE    S +S         ++DH TV +  +K+CY+    +G  +LDAP+SGGP GA   TLSIMVGG  ++F  S+P  E MG+ +  MG SG GTA KLINQLLT VH  A+AEA +L+    + D  + + +L  S+G S ML+RS  ++     +D   EG                 S  P RN  KD S+IE+ G++  ++LPLT  +   +   K E G E  D+A +++++
Sbjct:    1 MKVGFIGLGNMGQGMAXNLLSKGADLNVXTRNPEKIKNMEKKGA--------------KGCYSLAQLVESSEIIFTCLPDINTSLDIIVGESGIMSFIS----DESKIIVDHSTVDIATSKKCYEXVKTRGSNFLDAPISGGPVGAKDGTLSIMVGGDSDSFDKSMPYFEMMGTTIKRMGDSGTGTAMKLINQLLTAVHTTASAEALSLANAAKV-DIDSAMEILMVSFGFSRMLERSAPII-----RDRKFEG-----------------SSVPARNIHKDISIIEKMGQDLSVKLPLTEVSKKLYDLLKNE-GKEMDDMAGIIQII 286          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: PCI17572.1 (3-hydroxyisobutyrate dehydrogenase [SAR202 cluster bacterium])

HSP 1 Score: 153.3 bits (386), Expect = 1.500e-33
Identity = 103/321 (32.09%), Postives = 163/321 (50.78%), Query Frame = 0
Query:   48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVF---HSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVV 366
            +GF+GLG MG  M   L + GF L + +    ++Q +V  I  AG         +AA S+  + +E   +   LP+    E++F     +++   P ++  ++DH TV +  +K C      +G  +LDAP+SGG + AA  TL IM GG  EA+  +LP    MG+ V H+GP+G GT  KL+NQLL G+H  AAAEA  +  K G +D A +  +++  WG+S ML R+  ++   +                   F    T    ++ FLKD  +I++  +E G+E+P  A  A  F +   + G  + D AA V ++
Sbjct:    6 VGFIGLGRMGLPMSYRLLAAGFDLTVHN----RSQXKVKEIASAG--------ARAATSVVEVVREADVVLACLPDVATSEEIFLGDDGIVANAKPGQV--LVDHSTVGMATSKACAAAAEAKGAFFLDAPISGGTERAADGTLVIMAGGPVEAYQRALPSFXAMGTTVRHIGPTGTGTVVKLVNQLLVGIHSVAAAEAMVVGAKAG-ADPALVFEVVNSGWGHSFMLDRNXPVMLDRD-------------------FDGARTQ---IKVFLKDMGLIQDLTKELGIEMP-GANLAYSFVKQAVDKGFGDMDSAAAVMLL 288          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_066388369.1 (NAD(P)-dependent oxidoreductase [Bacillus mesonae])

HSP 1 Score: 151.8 bits (382), Expect = 4.400e-33
Identity = 92/232 (39.66%), Postives = 140/232 (60.34%), Query Frame = 0
Query:   46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVF---HSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR 275
            + IGF+G G MGS M   L   G+ L++++    +T+ +V A++E G     AE+   A ++ +L+ EC  IC  L   G  E+V+   H ++    P  +   ID  TV    +K  +++ A++GI YLDAPVSGGP+GA   TL+I+VGG R+AF     +LE +G+ + ++GPSG+G+ AKLINQ L  VH  AA+EA       G+ D+  LL++L  S+G+S ML+R
Sbjct:    1 MKIGFIGTGVMGSRMAGRLLINGYQLKVYN----RTKEKVQALVEKG-----AEH---AETIASLAGECDIICTCLSMPGDVEEVYLGGHGIVKHARPGLI--CIDFTTVGADTSKAVFEKAAERGIDYLDAPVSGGPEGAENGTLTIIVGGDRQAFEKVSSVLEALGATIEYLGPSGSGSIAKLINQYLVAVHSLAASEAMVTGAAFGL-DSEKLLNILKVSYGDSRMLRR 217          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: ACZ40755.1 (6-phosphogluconate dehydrogenase NAD-binding protein [Sphaerobacter thermophilus DSM 20745])

HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32
Identity = 102/324 (31.48%), Postives = 161/324 (49.69%), Query Frame = 0
Query:   48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRL-HTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVVRGFEG 371
            +GF+GLG MG  M  NL   G+        +V   +R  A++E    +++ E  + A S   +++    +   LP     E+V+       P +R    ++D  TV    +++ Y    ++G  +LDAPVSGGP GA   TL+IMVGG ++    ++P+L+ +G+ + H+GPSG+GT  KL+NQLL G+++ A AEA     K G +D  ALL +L  S+G+S ML R   L+ + + +                        G P+   LKD  +I E G    + L L A     F+ G+   GL + D+ A+VK +    G
Sbjct:    3 LGFIGLGKMGKPMTRNLLRAGY--------EVTIHNRSRAVVE----ELSGEGARPATSPREVAEAADLVITCLPTPATVEEVYLGEDGLIPAAREGQILVDCSTVGPALSRQLYAAAQERGAGFLDAPVSGGPAGAESATLTIMVGGDKDVLDRAMPVLQALGTNIHHVGPSGSGTVVKLVNQLLVGINMAAVAEAVVFGVKAG-ADPQALLDVLQSSFGSSRMLTRGLPLIMERQFE-----------------------GGTPINLILKDLGLIHEVGSALDVRLMLGAVAQEAFKEGRAL-GLGDEDMVALVKPLERLAG 289          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_052295408.1 (NAD(P)-dependent oxidoreductase [Sphaerobacter thermophilus])

HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32
Identity = 102/324 (31.48%), Postives = 161/324 (49.69%), Query Frame = 0
Query:   48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRL-HTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVVRGFEG 371
            +GF+GLG MG  M  NL   G+        +V   +R  A++E    +++ E  + A S   +++    +   LP     E+V+       P +R    ++D  TV    +++ Y    ++G  +LDAPVSGGP GA   TL+IMVGG ++    ++P+L+ +G+ + H+GPSG+GT  KL+NQLL G+++ A AEA     K G +D  ALL +L  S+G+S ML R   L+ + + +                        G P+   LKD  +I E G    + L L A     F+ G+   GL + D+ A+VK +    G
Sbjct:    4 LGFIGLGKMGKPMTRNLLRAGY--------EVTIHNRSRAVVE----ELSGEGARPATSPREVAEAADLVITCLPTPATVEEVYLGEDGLIPAAREGQILVDCSTVGPALSRQLYAAAQERGAGFLDAPVSGGPAGAESATLTIMVGGDKDVLDRAMPVLQALGTNIHHVGPSGSGTVVKLVNQLLVGINMAAVAEAVVFGVKAG-ADPQALLDVLQSSFGSSRMLTRGLPLIMERQFE-----------------------GGTPINLILKDLGLIHEVGSALDVRLMLGAVAQEAFKEGRAL-GLGDEDMVALVKPLERLAG 290          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_095306175.1 (NAD(P)-dependent oxidoreductase [Bacillus sp. 7504-2] >PAE22473.1 3-hydroxyisobutyrate dehydrogenase [Bacillus sp. 7504-2])

HSP 1 Score: 148.7 bits (374), Expect = 3.800e-32
Identity = 94/230 (40.87%), Postives = 132/230 (57.39%), Query Frame = 0
Query:   46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRLHTV-IDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR 275
            + IGF+GLG MGS +   +   G  L +++    KT++            + A   Q A  + +LSKEC  IC  L      E +F +  +  P +R  TV ID  TV V  ++R Y +  + GI+YLDAPVSGGP+G  +RTL+IMVGG +EAF   LP+L+     + ++G SG+G+AAKLINQ L  VH  AA+EA       G+ D   L+HLL+ S+G S ML+R
Sbjct:    1 MKIGFIGLGVMGSRIAKKMLEGGNQLVVYNRTVTKTEN------------LVALGAQRANDIASLSKECEIICSCLSMPEDCEHIFQN--TVLPYARTGTVCIDFSTVGVKTSQRIYTQAKENGISYLDAPVSGGPEGVEQRTLTIMVGGEQEAFVKVLPLLKLFAETIEYLGESGSGSAAKLINQYLVAVHSVAASEAMVAGASFGL-DPEQLVHLLTASYGTSRMLER 215          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: OUM94170.1 (3-hydroxyisobutyrate dehydrogenase [Thermobacillus sp. ZCTH02-B1])

HSP 1 Score: 145.2 bits (365), Expect = 4.100e-31
Identity = 94/228 (41.23%), Postives = 130/228 (57.02%), Query Frame = 0
Query:   48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRLHTVI-DHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR 275
            IGF+GLGNMG  M  NL   GF +   +  K   +       +AG G+I     Q       L+ E   +   LP     E+V+ S     P  R   ++ D  TV    ++R Y+  A +GI +LDAPVSGG  GAA+ TLSIMVGG R AF  ++P  E MG+++ H+GPSG+G+A KLINQL+ G+H QA +EA AL ++ GI D A L+ +L  S+ +S +L R
Sbjct:    4 IGFIGLGNMGLPMAANLVKAGFEVYGLNRSKGAEEK----FAQAG-GRIGLTRAQ-------LAAEMDMVITCLPMPADVEEVYLSEDGLIPNGRPGLLLADCSTVGPELSRRLYEAAAARGIAFLDAPVSGGTVGAAEGTLSIMVGGDRGAFDRAMPAFEAMGNMIRHVGPSGSGSAVKLINQLMVGIHTQAVSEALALGRRAGI-DEALLVDILMASFASSRILGR 218          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: GBD16014.1 (2-hydroxy-3-oxopropionate reductase [bacterium HR26])

HSP 1 Score: 145.2 bits (365), Expect = 4.100e-31
Identity = 106/332 (31.93%), Postives = 161/332 (48.49%), Query Frame = 0
Query:   48 IGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVF---HSLLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSPSPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEEGGLEEWDVAAVVKVVRGFEGGKEEGR 377
            +G +GLG MG  M  NL   GF++       V  +SR          ++A E   AA S   ++++   +  SLP     E+V+   + L+    P ++  +ID  TVS G ++R Y    ++   +LDAPVSGGP GA   TL+IMVGG  E    ++P+ + +G  + H+GPSGAG+  KL+NQLL  +++   AEA     K G +D   LL ++  S+G S ML+R+  L+ + + Q                        G P+   LKD  +I E G+E    L L A     F+  +  G  +E D+ A+ K V    G +  GR
Sbjct:    3 VGVIGLGKMGKPMTRNLLKAGFTV------VVHNRSR------GPVDELAREGAVAAWSPAEVAQQADVVVTSLPTPASVEEVYLGENGLIGAARPGQV--LIDTSTVSPGLSRRLYAAAKERAAGFLDAPVSGGPAGAESATLTIMVGGDAEVVEQAMPVFQALGKNIHHVGPSGAGSVVKLVNQLLVAINMAGVAEAIVFGVKAG-ADPQVLLDVIKTSFGGSRMLERALPLVMERQFQ-----------------------PGTPVNLILKDLGLIHEVGKELDTRLLLGALAQEVFKEARAAGFGDE-DMVALFKPVERLAGVEVRGR 295          
BLAST of NO24G01120 vs. NCBI_GenBank
Match: WP_015256088.1 (beta-hydroxyacid dehydrogenase [Thermobacillus composti] >AGA59358.1 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase [Thermobacillus composti KWC4])

HSP 1 Score: 143.7 bits (361), Expect = 1.200e-30
Identity = 98/242 (40.50%), Postives = 133/242 (54.96%), Query Frame = 0
Query:   46 LPIGFVGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEYIQAAPSLEALSKECGTICVSLPNEGIGEKVFHS---LLSTPPPSRLHTVIDHGTVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFSCSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKLGISDTAALLHLLSKSWGNSTMLQR--SGALLQQA 283
            + IGF+GLGNMG  M  NL   GF +   +  K   +       +AG GK      Q       L+ E   +   LP     E V+ S   L+    P  L  ++D  TV     +R +   A +GI +LDAPVSGG  GAA+ TLSIMVGG REAF  + P  E MG  + ++GPSG+G+  KLINQL+ G+H QA +EA AL +K G+ D AAL+ +L  S+ +S ML R  SG + ++A
Sbjct:    1 MKIGFIGLGNMGLPMAINLVKAGFEVYGLNRSKGAEEK----FAQAG-GKTGLTRAQ-------LAAEMDMVITCLPMPADVEAVYTSEDGLIPNGRPGLL--LVDCSTVGPDLNRRLFDAAAARGIAFLDAPVSGGTVGAAEGTLSIMVGGEREAFDRAKPAFEAMGKQIYYVGPSGSGSVVKLINQLMVGIHTQAVSEALALGRKAGL-DEAALVDILMASFASSRMLGRHYSGFIAKEA 227          
The following BLAST results are available for this feature:
BLAST of NO24G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN77038.17.800e-3837.106-phosphogluconate dehydrogenase NAD-binding [Ecto... [more]
OUU77370.16.600e-3734.76hypothetical protein CBC30_01625 [Chloroflexi bact... [more]
PCI17572.11.500e-3332.093-hydroxyisobutyrate dehydrogenase [SAR202 cluster... [more]
WP_066388369.14.400e-3339.66NAD(P)-dependent oxidoreductase [Bacillus mesonae][more]
ACZ40755.12.200e-3231.486-phosphogluconate dehydrogenase NAD-binding prote... [more]
WP_052295408.12.200e-3231.48NAD(P)-dependent oxidoreductase [Sphaerobacter the... [more]
WP_095306175.13.800e-3240.87NAD(P)-dependent oxidoreductase [Bacillus sp. 7504... [more]
OUM94170.14.100e-3141.233-hydroxyisobutyrate dehydrogenase [Thermobacillus... [more]
GBD16014.14.100e-3131.932-hydroxy-3-oxopropionate reductase [bacterium HR2... [more]
WP_015256088.11.200e-3040.50beta-hydroxyacid dehydrogenase [Thermobacillus com... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01120.1NO24G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632199gene_7340Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101286g1gene9345Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01120.1NO24G01120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01120 ID=NO24G01120|Name=NO24G01120|organism=Nannochloropsis oceanica|type=gene|length=2402bp
ATGTGGCGGTGTCTTCTCCGCTACCACCGGAGAGGACCAAGAGTCCCTTT
CTCCCTCCTGCCCCTGTCTGCCAGGGAGGGAGGGAGGGAGGGAGGGAGGG
CCTTCAGTAGCCACAAAAGCAGCAGCAGCCACCAGCTTCCGATCGGCTTT
GTTGGGCTAGGAAACATGGGCAGgtaggtcggtagggagagagggagcgc
gcgaggattgatgcgacgggtgatgatagggacttactttccccccactt
cttttccgtccttcccttcctccctccctttccccctccctccgttcctc
cctaagTGGGATGATCAACAACCTAGCTTCTTGTGGCTTCTCCCTCCGCC
TCTTCGACGCCGACAAGGTGAAGACTCAGAGCAGAGTCTCTGCCATATTA
GAGGCCGGGAAAGGCAAGATCGCGGCTGAGgttagcctccctccctcccc
cccgtctatctctcattctcctcctcgatttcgccaccttacacgtcatc
aaccattttcctcaccattttcccgccttttgcccccttcctccctccct
ccctccaccagTACATCCAAGCTGCCCCTTCCCTCGAAGCGCTGAGTAAA
GAATGTGGCACCATCTGCGTCTCCCTCCCCAACGAAGGAATAGGAGAGAA
Ggtaacccccctccctcctccctcttcccctccctccctccctcctcaca
agattctcttccttaccctccctccctccctgtctccctccctccttcct
tgagGTCTTTCACTCCCTCCTCTCCACGCCCCCGCCCTCGCGCCTGCACA
CCGTCATTGACCACGGTACGGTATCTGTGGGCTTCACCAAACGATGCTAC
CAGgtgggaagggaggaggggagggagcaagggagaaagggagagaagga
gcggacgtttggaatgggaggttcgagctgtttgacgcagaatgagatca
agggaggcaaggaggaaaggaggcaggccgcccacacctatccgtcgtcc
tcctcctttctcttatagCGTTTTGCCCAGCAAGGCATCACCTACCTCGA
CGCCCCCGTCAGCGGCGGCCCTGATGGTGCGGCCAAAAGAACTTTGTCCA
TAATGGTCGGAGgtacgcgccttcccgccctcccgccctccttccctcct
tccctccttccctccttctctcccttccttctttcctcgctctctccttg
tagtcctttttttaccatgatgccaaaactgtttagcgaagtacattttc
cttcatcacagtcggaggtacactgcacgttctcctattccctccctccc
tccctccttccctacgtcgtcgtcccaatcctccttcctcccttcctccc
tctttccttccctagGCTCTCGTGAAGCCTTTTCCTGCTCGCTCCCAATC
CTAGAAGGGATGGGCAGCCTCGTGATTCACATGGGCCCCTCAGgtacgtc
gttctccctccctcccttcctccctccctccctcacgtcttctctccttc
cttctctgtccagGTGCTGGTACGGCCGCTAAGCTCATCAACCAACTACT
GACGGGCGTGCACATTCAAGCTGCCGCGGAGgtacgttgctcgccctccc
tccttccctccctccttccctccctcctccctccttcccttcctcccccg
tgaattctccgccggatcagtcaggtttctcacgacctcttacctccttc
cctccctccctttctctcttacctcctaagGCTTATGCTCTTTCCAAAAA
GCTGGGTATCTCCGACACTGCCGCCCTCCTCCACCTCCTCAGCAAGAGCT
GGGGGAACAGCACCATGCTGCAGgtgagcccttcctccctacctcctact
ccatcccttcctctctccctctgtcttccaacttctcgccctttttggcc
tctgaagcacaaatcccgaggagtgggcccggctagaagtacgctctccc
tccctccctcgcttattctctctttccttatccttcttaatgtcgtatgt
ccttatttcttcccttccattcctcccatctcccttcccctcctcactct
tctccccccccccccatcctcccagCGTTCCGGCGCCCTCCTCCAACAAG
CCGAGCAACAAGACACGCTGCGTGAAGGTGGAAGCGAGAGAGGGTCATCC
TCCCCCTCCCCCTTCTCCTCCCTCTCGACCTCTGGGGCTCCCCTTCGAAA
TTTCCTTAAAGATTTTTCTATGATAGAAGAGGCAGGGAGGGAGGGAGGTC
TAGAATTGCCCCTTACAGCAGAAACCGCAGCTCAGTTTCGTAGGGGGAAA
GAAGAGGGAGGGTTGGAGGAGTGGGACGTCGCGGCGGTGGTGAAGGTGGT
GAGGGGCTTTGAAGGAGGGAAGGAGGAGGGAAGGAGGGGAGCCAGTGAAT
GA
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protein sequence of NO24G01120.1

>NO24G01120.1-protein ID=NO24G01120.1-protein|Name=NO24G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MWRCLLRYHRRGPRVPFSLLPLSAREGGREGGRAFSSHKSSSSHQLPIGF
VGLGNMGSGMINNLASCGFSLRLFDADKVKTQSRVSAILEAGKGKIAAEY
IQAAPSLEALSKECGTICVSLPNEGIGEKVFHSLLSTPPPSRLHTVIDHG
TVSVGFTKRCYQRFAQQGITYLDAPVSGGPDGAAKRTLSIMVGGSREAFS
CSLPILEGMGSLVIHMGPSGAGTAAKLINQLLTGVHIQAAAEAYALSKKL
GISDTAALLHLLSKSWGNSTMLQRSGALLQQAEQQDTLREGGSERGSSSP
SPFSSLSTSGAPLRNFLKDFSMIEEAGREGGLELPLTAETAAQFRRGKEE
GGLEEWDVAAVVKVVRGFEGGKEEGRRGASE*
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Synonyms
Publications