NO24G01110, NO24G01110 (gene) Nannochloropsis oceanica

Overview
NameNO24G01110
Unique NameNO24G01110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4294
Alignment locationchr24:305650..309943 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:305650..309943 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01110.1NO24G01110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672667gene_7339Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01110.1NO24G01110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01110 ID=NO24G01110|Name=NO24G01110|organism=Nannochloropsis oceanica|type=gene|length=4294bp
ATGGCTTACGTATCTTCCTCGTTCTCTTCGCTTGCCCCTCCCTCCTCCTT
CGAGGCCCTCTCCTCTTCTTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTCCATTCTCCTCC
TCCTCCTCTTCCTCTCCTTTTTCCTTACCTCTCACCACCATCGCATCCAG
CTCTGAGCCGGAAGTATTAGCCTTTGAGACGTTGCTGCACGAACGAGGGA
CGTACCCGGACAGCCAGCACTATGATGTCCTGGAGGCAGCTTGGCGGGTA
GCCAGCACACATGGTCAGCAGCAGCAAAACCACGTACAGCAGCAGCAGCA
GCATAGACAGAATCAATTCAACCTCATATCTCATTTTCATTCCACTTCCT
CCCCTTCTTCCTCCTTCCTCTTCAAGTCCACGGTCGAAGAAGCCGTAACT
GCGCATGTCGACCACTTAATCCAACGCGCCCGCCTCTCCCGTGGACGGCT
CCGTGCCATCCTTACCCTCTTCTTGGACACCTGCTGCCCGCCCTGCCTTC
CTCCTTTCCCCATTCGCTTCCTCTGTGAAGACATTCTGTCTTTCTCTGAT
GTAGTACAAGCGACGGACGCGTCCCTTATTCACACCCTGAAAGCGAAGAG
TCTACCCCTCTCTCGAGTCGCTGAGAATTTCGATGCCTTCAAGATGTGTG
TACAGGAAAAGTGTTCCCTTGCCTCAACCTCCGCCCCCCTGTCCTCCTTT
GCCTCCTCCTCCTGCCTCCTATCCTATCCCGCCCAAAGGGAAGAAGGGAC
CGAAAATGGTGGGAAGGATGAAGGGGCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCCGTCTCCTCACTCTCATTCCCGAGCACAATCGTCATTCT
TTCCTCACATGCTGGTGCATCCGACGTGACCCCCACAACTTCCTCCTTTG
TCATGACGCCCACTTGGAGgttaatcacggctggcttcatcgctcccccc
ttgctttcgactactccagcgtgctctgcccgcatgggggtgggtaggaa
ggaagggcgggagggagggagagtgtcgggcatcgctgttgtgcagccat
gcgcattcggtggaggagagcttgtttcatcctgactggctttatactaa
cccatgtcccaagggtaaggcatgccagcttgccgcttcctgccctttca
cccatcctattcctcctcctccatccacacgtcctccttcacttcatcct
actcctccagCGCCTGCACCTTCACTTCCCATTGCCTCTTCCTCCCTTCC
TCCCTTGTTCCCGCTCTCCACTGGTTCTATTGTCTCGCAACTCACGCCGT
CTGCCCCGTCTTTCATTCCGTCATGGGAGAGGCAGCAGCAGCAGCAGCAG
CAGCGGCGGCCCAAAGCCCTCTTCTCTCCTTCCCCCCGCATCCGCTGCCG
CCGCCGCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTTC
TCCATCTCCTCCTCCTCCTCCTCCTTCTCCTCAACATCATCTTCAGCCCC
CCAGAACCCCCGTAACAACCAGCATCATCGCATCAAATCAAGCCCTGTCT
CTCTCACTTCCTCTTCCTCACATAATGCCCTGTCCTCCTCCTCTTTTTAC
CCCCGTCGCAGCAGTGGCTTGAGTCGCCTCTTGTCAGAACTACgtaaggg
aggagggggggaagggagggagagggaaatgatcactgagttcctctaaa
ttatggtataacaagccctgccccctcccccacgccctccttccctcctt
ccctccctccctccctccctccctccctccctcatcacacaattaatcag
GTCGCTATGGCATGGATGTGCTGATCTATCCGACGCCTGGGCTGCATGCC
CTCGTTCTCCTGGTCATCTATCGCTTCTTCCAGGAGCATGCTGCCGAAGA
GGGGTCGTCGCCGTTAACACATAGgtaaagagggagagagggagggaggg
agggagggaaatggggattaaggcctcctgagctaaatttgtttctttcc
tgttcttttaacaaacgttctctcatttatcagcttttctttcaccccca
ctatcttcctcccccttctgcagAGAAATCACCTACCGGCTCTTCTACCG
GCTTACCGGCCTCTCTCAATCCCTCCCCCACATCGACGCCGTCTCCCGCA
CCAAACTCCGAGGAGTCCTCGCCCTCTTAAAGACCACGGGGTGCTTCGTC
TGTCAGAAGACCAGCGATACCGACCTCACCACAATGGCCCTTCGGCCCTC
CCTCTCCTCCTTCCTCCTCTTCCGCGCCCACTACGAGCTTGGTGTCCTTG
CCTACTCAGCTTACGCGTCTGTCTGCCTGAACAGCAGCGACCTCGCCCTC
CTTCTCGACCCTGCTGCTGGCACTGCTGCTCGCCCTGATCTAAAGGACGG
ACTGACCCGTCACATgtggccggtagtgatgagggacttcgaaaccgccc
tccatcctgctttgcctttctggaagatccttgcaaattccacccattct
tccccctcctcctcctctccttctccatccgtctcctcattcacttcttc
tccttcttccgcctcttcttccgcctccttctctacttcctcctctgtct
cctcttttccctcttctacctcaatcttgtccccgtcttcagGCGGGCGG
GCAGGGGGCAGCTGCTGAATCAACGCCAGCCGCATAAGCAACAGGAGCAG
CATCAGGTGTATCAGCAGCACCACCCTTACCAGCAGCACCAACCGTACCA
GCAGCACCAGCAGCATCAGCAGCACCAGCAGCACCAGCAGCACCAGGAGC
TACTGTTGCCGATTCACTCACATCTCCCGCCACCCCCAGGCCTTCACATT
GCTTCCCTTTCCTCCTTCACCACTCCCTCACCCGCCTCCGATTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCGCAA
TTTCTTCTTCCCCGTCCATTCGTGAGGAAGgtgaatcggaagagggaagg
gagaataggcagagccaaatcaacccgcgctgtctcgcctcctccttcct
cccaaccccccccttcacgagtcagacttcccatctttcccctctccctc
cctcctccacgccgtaatgcgtcccctctcaactgccccttgcagcactc
gtcaagGCACAAACTTCTCCTCCGTTCTTGACCGGAGCATACCGACGTAT
CAACGACGCGAACTGCTGCAGTATCACCCGCAGCAACTTCAGGAACAACG
CCAGTGTGAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAATGTAGACTACTGCGTGGGTCCTCCCCCTCCCCC
TCCCTTTTCTCCTGTCTCTCCGCCACCCCTGCCTTTTCCCCTTTTCCCCA
CATTCCTTCCTCCCCTGATGCGGTCTACGAGCAAGAAATTCTCCCTTTGC
TTCAACGGGTGTCGTTGGAGGGGGACGAGCGCTTGCAGGAGGTTGTGGCC
AGCAGCTTGGCAGGAGGAGGGCAACAGCAGCAAGTGGTGAAAGCGACCAA
ACAATGGCTAGGACTGATGTCGCCGGGGTTGAGAGGCAGAGAGAGAGAAG
ATAAGGGTGCTTCAGCGCTTGGTCCGCCAGAAATGAGAAAGGAAGATGGA
GGTAGGGAAGAAAAGCCGGTAGAGTCGTCGCCGCCCCCTACCGTCCGGCC
TTCTCTTCATTCAGGTTTCGAAATGCCAGGCCTCAAGTCGTATGCTGTCC
ATCATCACCAGCACCACCACCCTCCATATTCCTTCGGCTCTCCCTCATTT
TTCGCCTCCCCCCTCCCAGAGCTATCTCAAATCCCTTTCTCCTCCTTTTC
CTCTTTATCTCACCGGAGCCCTCTCCCGCTGCCGCCAGTGACCACAATAG
ATGGTAACAATAAAAGAGAAGGGGGCCTTGGTGGCGATGGAGATGATGAA
TTGTCCCAACAGGAACACCAGCAGCAGCAACAGTCTCGCCAGCACCAGCA
CCAGCACCAGCACCAGCACCAGCACCAGCAGCAGGTGGTGGTGACCAGCG
GTGGTAGTGTCGGAGCTCTCCTTCTCGGATTTGTGCCCCTTTCTCTCTCG
TCCACTGCCTCGTCTCCGCAGTCTTTGTCTTCCTCGTCGCTTTTAGCGAC
GTCGACTGATAGTTATCGTAGAGGAATTGAAGAGGCAGGAAGGGGAGGAG
TGAAGCCAAATGACGTGGAGGACAAAATGGAGCAGCCGCAGTAA
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protein sequence of NO24G01110.1

>NO24G01110.1-protein ID=NO24G01110.1-protein|Name=NO24G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1098bp
MAYVSSSFSSLAPPSSFEALSSSSFSSSSSSSSSSSSSSSSSSSSSPFSS
SSSSSPFSLPLTTIASSSEPEVLAFETLLHERGTYPDSQHYDVLEAAWRV
ASTHGQQQQNHVQQQQQHRQNQFNLISHFHSTSSPSSSFLFKSTVEEAVT
AHVDHLIQRARLSRGRLRAILTLFLDTCCPPCLPPFPIRFLCEDILSFSD
VVQATDASLIHTLKAKSLPLSRVAENFDAFKMCVQEKCSLASTSAPLSSF
ASSSCLLSYPAQREEGTENGGKDEGASSSSSSSSSSSRLLTLIPEHNRHS
FLTCWCIRRDPHNFLLCHDAHLERLHLHFPLPLPPFLPCSRSPLVLLSRN
SRRLPRLSFRHGRGSSSSSSSGGPKPSSLLPPASAAAAAAASSSSSSSSS
SSFSISSSSSSFSSTSSSAPQNPRNNQHHRIKSSPVSLTSSSSHNALSSS
SFYPRRSSGLSRLLSELRRYGMDVLIYPTPGLHALVLLVIYRFFQEHAAE
EGSSPLTHREITYRLFYRLTGLSQSLPHIDAVSRTKLRGVLALLKTTGCF
VCQKTSDTDLTTMALRPSLSSFLLFRAHYELGVLAYSAYASVCLNSSDLA
LLLDPAAGTAARPDLKDGLTRHMRAGRGQLLNQRQPHKQQEQHQVYQQHH
PYQQHQPYQQHQQHQQHQQHQQHQELLLPIHSHLPPPPGLHIASLSSFTT
PSPASDSSSSSSSSSSSSSSSSSSAISSSPSIREEGTNFSSVLDRSIPTY
QRRELLQYHPQQLQEQRQCERQQQQQQQQQQQQQQQQQQCRLLRGSSPSP
SLFSCLSATPAFSPFPHIPSSPDAVYEQEILPLLQRVSLEGDERLQEVVA
SSLAGGGQQQQVVKATKQWLGLMSPGLRGREREDKGASALGPPEMRKEDG
GREEKPVESSPPPTVRPSLHSGFEMPGLKSYAVHHHQHHHPPYSFGSPSF
FASPLPELSQIPFSSFSSLSHRSPLPLPPVTTIDGNNKREGGLGGDGDDE
LSQQEHQQQQQSRQHQHQHQHQHQHQQQVVVTSGGSVGALLLGFVPLSLS
STASSPQSLSSSSLLATSTDSYRRGIEEAGRGGVKPNDVEDKMEQPQ*
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Synonyms
Publications