NO24G01080, NO24G01080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01080 vs. NCBI_GenBank
Match: CBN77287.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 477.6 bits (1228), Expect = 6.700e-131 Identity = 340/687 (49.49%), Postives = 425/687 (61.86%), Query Frame = 0 Query: 3 FVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKS-------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAFTNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTALASSGS----LAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNVKVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLVHLLREEG--NVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEP----LQALDSKVKSALTRAYNSSVHKGQGLGHTAIKGAKK 643 FVV+GV ++ GRE EDL+KQYGG++T +VS +T +L+ G+VL+DGR EG KYK A T+II E L+ M+ S XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX MW KY P + +IG G KL WLQ W+ H K GK+N GARAALLSG PG+GKS+T LVAR G+ V ELNASDTR+K+SL EEL V+ N L+ + + MDEVDGM G DRGG+QELI LIK S+VPII ICNDR K+RSL N+CYDLRF RP K TIA R+ +A EG++ D NA E +VE+ GND+RQVL+ LQMW++ SS+MTYM+ K + AI+KDKN R+ FDAA++IL R DR+ +FF DYSLLPLLV QNY+ + + ++ ++T AA+AAVSD D++ + G QHWELLP QAALNV+VG G S + FP FP+WLG YS NKRRRLLGEL+ H++ +S + ++RL Y+ LK L LREEG ++ L+ YG+SR+DL E + E + G K P +LDSK +SA+TR YNS HK Q L A++ KK Sbjct: 262 FVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMV-MKTRIIDEDGLFKMLRDSNPKGQXXXXXXXXXXXXXXXXXXXKPAVANPYQPXXXXXXXXXXXXXXXXXXXXXXXXXXAVIAGGKGKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQNPGQMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWH---LKGAKAPTGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANXXXXXXXXXXXXXXXXXMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKNQRIGPFDAARSILGGASRTPLRDRYELFFTDYSLLPLLVHQNYLSSL-MQVDAKVRTEVTA--AASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSVGGGS-LGFPEFPKWLGNYSRENKRRRLLGELSTHLNA-SVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVDLLEEYGLSRDDLFEVLPEFVLSGKGMKRPPPDLFGSLDSKTRSAVTRCYNSQAHKSQALA-VALQAPKK 938
BLAST of NO24G01080 vs. NCBI_GenBank
Match: GBG31639.1 (Replication factor C subunit 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 425.6 bits (1093), Expect = 3.000e-115 Identity = 304/641 (47.43%), Postives = 417/641 (65.05%), Query Frame = 0 Query: 2 TFVVTGVTEAF-GREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAFTNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTALASSGSL--AAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLD-RFNMFFIDYSLLPLLVEQNYIDVI--RSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNVKVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLVHLLREEG--NVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQGLGH 635 T V+TG + F REE + +++ G ++TTSVS +T+YL+ G VLEDGR S+ +KYKTAQE T I+ E A + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +W KY P T+ DL+G T + L WL+ WDA+H KT ++ + K+N GA+AA+LSGPPGIGK++ +VAR G+ V ELNASD R+KK ++ +GD + ++ + GS A +KR+++MDEVDGMS DRGG QELI++IK S+VPIICICNDR VRSL+NYC+DLRF RP+ ++ R+++IA +EG++A NA+E +V+S DVRQV+ LQMW +S+ +T+ D + ++ KD+ L+AFDAA + + + D R+N FF+DY L+PL+V +NY + SR + + + ++ AAA A D D+V I G Q W LLPL AAL+++V +G S I FP FP+WLGK S+ K++RLL E AMHM ++ +S +LRL+Y+ AL+ +V L +++ IE + +YG+SR+D+ ETM E+ A K L + +KVKSA TR +N H Q L H Sbjct: 177 TIVITGELDKFSSREEAAEELQRLGAKVTTSVSGRTSYLVAGHVLEDGRPTSQSKKYKTAQEKGTT-ILDEPAFLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRSVDEDNI--------LWVDKYKPMTVADLVGNTKAVADLTRWLRDWDAVHIKKTLQIKY--NKQNPGAKAAILSGPPGIGKTSAATIVARATGYDVIELNASDARSKKVVRAVVGDAAHSASVMALGSRSEAEAKKKAKRVIIMDEVDGMSSDDRGGNQELIQIIKQSRVPIICICNDRQKNAVRSLSNYCFDLRFARPSLPSLTKRVIEIAQKEGMDAMPNAVERLVKSSNGDVRQVIGLLQMWKATSNTITFDDVGRQEASLKKDQTFALTAFDAATFLFGTASKPASFDLRYNAFFVDYDLIPLMVAENYPKSVGAGSRHPPSSLETLKQLSAAADAYCDADIVSQQIRGA-QQWGLLPLSAALHLRVANISGGS-IGFPGFPEWLGKNSARGKKKRLLTETAMHMR-QKTMMNSQTLRLDYMDALRNSIVRPLHNGAPEDIDATIESMQSYGLSRDDVFETMQEVRLENADPK--LFEIPTKVKSAFTRKFNKLGHLSQALVH 801
BLAST of NO24G01080 vs. NCBI_GenBank
Match: OQR91027.1 (replication factor C subunit [Achlya hypogyna]) HSP 1 Score: 417.2 bits (1071), Expect = 1.100e-112 Identity = 251/634 (39.59%), Postives = 361/634 (56.94%), Query Frame = 0 Query: 1 MTFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAFT-NGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTALASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNVKVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALK-TRLVHLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQGL 633 +TF +GV + R E E +VK+YGG + SV++ T YL+TG +LE+G V+E K+K A + KI++++ +++I + +W K+ P++M+D+IG L +L WL+ +DA+H TKKV F +N GA+ LLSGPPGIGK+T AL AR G V ELNASD R+KK+LQ L D++ ALA G A +KR++VMDEVDGMS DRGGM ELI +IK SK PI+CICNDR S KVRSLANY DL+F RP K IA R++ I +G++ ++NA+E E GND+RQ+LN +QMW +S + MTY D + +KD LRL+ F A + I + +F DR +F+DY L+PL+V++NYI I+S++ + DK+ + AAA +++ DLV ++ + +Q W+LL QAALNV +A F+ P F +W+GK SSTNK +RLL EL++ M S + +++R++Y+P +K L LL E +++ I+ LDA +S++DL E+M F P ++ LD+K KSA TR YN VHK Q L Sbjct: 147 LTFAFSGVLSSLTRGEAEAVVKRYGGSVAGSVTRNTKYLVTGELLENGDSVTESSKFKDAVA-KSIKILNQNDFFNLISERAERLVPKASAGKGKAKLGTTAPETM-------------------------------------------LWPDKHKPKSMNDIIGNGELGKRLVQWLRDFDAVHVKGTKKVPFNPKMTDNMGAKTVLLSGPPGIGKTTLAALAARECGMDVLELNASDARSKKTLQSGLADIVGTQALAFGGK--AAMGLTKRVIVMDEVDGMSSGDRGGMAELIAIIKKSKTPIVCICNDRQSPKVRSLANYALDLKFRRPTKSQIATRLLAIGAAQGMQCERNALEEAAERFGNDIRQLLNWMQMWNRSKTTMTYDDVVAHFYQSEKDDVLRLNPFSATQQIF--KNGATFDDRNEAYFVDYDLMPLMVQENYIASIQSKRTSS-DDKLDDITAAADMIAESDLV-SVYIRKEQRWDLLTKQAALNVAACTYA-EGFVSRPEFSRWMGKNSSTNKAKRLLSELSIRMRS-HASGARNAIRMDYVPYMKEVLLTRLLAGEESMDGVIDMLDACEISKDDLTESMEHFKF-PGVVRKSYAELDTKAKSAFTRKYNKGVHKSQAL 727
BLAST of NO24G01080 vs. NCBI_GenBank
Match: XP_002997350.1 (replication factor C subunit, putative [Phytophthora infestans T30-4] >EEY68800.1 replication factor C subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 414.8 bits (1065), Expect = 5.300e-112 Identity = 264/651 (40.55%), Postives = 359/651 (55.15%), Query Frame = 0 Query: 2 TFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAF-TNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTAL---ASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNV-KVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLV-HLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQG-----LGHTAIKGAK 642 TF +GV E+ RE+ LVK GG I S+++ T YL+ GS LE G V++G KYK A N +I++++ Y++I ++ ++WT KY PQT++ +IG L KL WL W+A+H TKKV F T EN GA+ LLSGPPGIGK+T LVAR GF ELNASDTR+KK LQ L DVL AL A+SG K ++R+++MDEVDGMSG DRGG ELI+L+K SK PIICICNDR S KVRSLAN+ +DLR RP K I R+++I EGL +KNA+E + GND+RQ+L +Q W +++++TY D +KD++LRL+ F A + I LSF R +F+DY L+PL+V++NYI I + + + ++ M A+ +S+ DL+ N + +Q W+LL QAA+NV Y AG FI P F +WLGK SS +K +RLL EL++ M S S +RL+Y+P +K L+ LL E N+ IE LD +SREDL E+M F P ++ LD+K K+A TR YN + HK Q LG T IK A+ Sbjct: 216 TFAFSGVLESLSREDAVHLVKSCGGSIAISITRSTKYLVIGSTLEQGGNVTDGSKYKEAVA-KNVRILTQNEFYNLITEA----------------------------ATAQQTQDLAAEKAKIKAETGALKTSSKGNQKLSTSINDELWTDKYKPQTLNHMIGNIELGKKLKTWLLDWEAMHVKGTKKVPFSTKLSENRGAKTVLLSGPPGIGKTTIANLVARECGFACTELNASDTRSKKMLQTGLKDVLGTQALQFGAASGEFKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLLKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKVQIGKRLMEIGLNEGLHMEKNAVEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIF--QRELSFDARNEAYFVDYDLMPLMVQENYIQSIMNNRRSSDENLEAAMH-ASEFISESDLL-NTYVRVEQRWDLLTKQAAMNVGACVYSAG--FIGHPEFSKWLGKNSSASKSKRLLSELSVRMRA-HASGSREVIRLDYVPYMKEILLKKLLSGEDNIHEVIELLDECEISREDLTESMESFKF-PGVKRHSYSELDTKAKTAFTRMYNKASHKSQAVVEAVLGSTTIKKAR 829
BLAST of NO24G01080 vs. NCBI_GenBank
Match: XP_002904596.1 (replication factor C subunit 1 [Phytophthora infestans T30-4] >EEY53965.1 replication factor C subunit 1 [Phytophthora infestans T30-4]) HSP 1 Score: 413.7 bits (1062), Expect = 1.200e-111 Identity = 264/651 (40.55%), Postives = 359/651 (55.15%), Query Frame = 0 Query: 2 TFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAF-TNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTAL---ASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNV-KVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLV-HLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQG-----LGHTAIKGAK 642 TF +GV E+ RE+ LVK GG + S+++ T YL+ GS LE G V++G KYK A N +I++++ Y++I ++ ++WT KY PQT++ +IG L KL WL W+A+H TKKV F T EN GA+ LLSGPPGIGK+T LVAR GF ELNASDTR+KK LQ L DVL AL A+SG K ++R+++MDEVDGMSG DRGG ELI+L+K SK PIICICNDR S KVRSLAN+ +DLR RP K I R+++I EGL +KNAIE + GND+RQ+L +Q W +++++TY D +KD++LRL+ F A + I LSF R +F+DY L+PL+V++NYI I + + + ++ M A+ +S+ DL+ N + +Q W+LL QAA+NV Y AG FI P F +WLGK SS +K +RLL EL++ M S S +RL+Y+P +K L+ LL E N+ IE LD +SREDL E+M E P ++ LD+K K+A TR YN + HK Q LG T IK A+ Sbjct: 93 TFAFSGVLESLSREDAVHLVKSCGGSVANSITRSTKYLVIGSTLEQGGNVTDGSKYKEAVA-KNVRILTQNEFYNLITEA----------------------------ATAQQTQDLAAEKAKIKAETGALKTSSKGNQKLNTSINDELWTDKYKPQTLNHMIGNIELGKKLKTWLLDWEAMHVKGTKKVPFSTKLSENRGAKTVLLSGPPGIGKTTIANLVARECGFACTELNASDTRSKKMLQTGLKDVLGTQALQFGAASGEFKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLLKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKVQIGKRLMEIGLNEGLHMEKNAIEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIF--QRELSFDARNEAYFVDYDLMPLMVQENYIQSIMNNRRSSDENLEAAMH-ASEFISESDLL-NTYVRVEQRWDLLTKQAAMNVGACVYSAG--FIGHPEFSKWLGKNSSASKSKRLLSELSVRMRA-HASGSREVIRLDYVPYMKEILLKKLLSGEDNIHEVIELLDECEISREDLTESM-ESFKLPGVKRHSYSELDTKAKTAFTRMYNKASHKSQAVVEAVLGSTTIKKAR 706
BLAST of NO24G01080 vs. NCBI_GenBank
Match: GAX23821.1 (replication factor C subunit 1 [Fistulifera solaris]) HSP 1 Score: 412.9 bits (1060), Expect = 2.000e-111 Identity = 298/673 (44.28%), Postives = 389/673 (57.80%), Query Frame = 0 Query: 1 MTFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKII-SEHALYDMIEK-------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAFTNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTALASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAIL----------CETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQ-------DKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNVKVGYHA-GPS--FIP-FPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLVHLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQGL 633 +TF +GV E RE +DLVK GGR+TT+VS KT YL+ GSVLEDGR+ +G KYK A E + I+ E Y +++ SXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX XXX +W KY P +++G KL WL W+ I + + T N +AALLSGPPGIGK+TT LVA+ G V E NASD R+KK+L GD+ S ++ T KR ++MDEVDGM DR GM ELI++IK SKVPI+CICNDR S K++SL YC DLR+ RP K IA R V + +EGL + NA E + ES GND+RQVLN LQMW++ + + + D K R + I+KD LR+S FDAAK +L E +R SF R + FF+DY LLV+QNY+ V++ G+ + + + RM AA A+SD DL N + GG Q+W LLPL ++L VK G+HA GPS F+P FP F WLG+ S+ K+ RLL EL H++ IS S RL YLP L+TRL+ LL+ + + + AI+F+D YG+ R+D+ E + E + + + L SK K++ TR YN + H Q L Sbjct: 171 LTFCFSGVLEQLSREAAQDLVKMLGGRVTTAVSSKTDYLVVGSVLEDGRDYQQGSKYKKAMELQSVVIVQGEELFYGLLQTYHDLCGPVAAPAVASTPVVSXXXXXXXXXXXXXXXXXXXXXXXXKAANPYAATXXXXXXXXXXXPATTTVXXXVTMTVAPVLGDTSSMLWVDKYKPTCAREILGNQDAVKKLTQWLNSWERIF-NTAQNSNKTFSAPNGPWKAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDI------TGSRTIDFNTQAKKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEHNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERENDINKDDILRVSLFDAAKQLLEGRQGLNGSTPEQERNSFFRRHDAFFVDYGFTGLLVQQNYLKVLQGPFGEAKRKNAASQLEVLHRMSDAAEALSDYDLAENQLRGG-QNWSLLPLCSSLIVKTGFHASGPSGGFLPGFPEFTSWLGRNSTKGKKYRLLSELQHHLN-YSISGGGSETRLSYLPVLRTRLLQLLQAD-DAQAAIDFMDEYGLDRDDVFEKLDEFVLS-SSKAAAFNDLSSKQKASFTRLYNQTSHSSQAL 832
BLAST of NO24G01080 vs. NCBI_GenBank
Match: GAX18261.1 (replication factor C subunit 1 [Fistulifera solaris]) HSP 1 Score: 412.5 bits (1059), Expect = 2.600e-111 Identity = 270/673 (40.12%), Postives = 367/673 (54.53%), Query Frame = 0 Query: 1 MTFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKII-SEHALYDMIE-------------------KSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAFTNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTALASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAIL----------CETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQ-------DKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNVKVGYHA-GPS--FIP-FPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLVHLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQGL 633 +TF +GV E R+ +DLVK GGR+TT+VS KT YL+ G+VLEDGR+ +G KYK A E + I+ E Y +++ + XXXXXXXXXXXXX +W KY P + +++G KL WL W+ I + T+ T N +AALLSGPPGIGK+TT LVA+ G V E NASD R+KK+L GD+ S ++ T KR ++MDEVDGM DR GM ELI++IK SKVPI+CICNDR S K++SL YC DLR+ RP K IA R V + +EGL ++NA E + ES GND+RQVLN LQMW++ + + + D K R + I+KD LR+S FDAAK +L E +R SF R + FF+DY LLV+QNY+ V++ G+ + + + RM AA A+SD DL N + GG Q+W LLPL ++L VK G+HA GP+ F+P FP F WLG+ S+ K+ RLL EL H++ IS S RL YLP L+TRL+ LL+ + + + AI+F+D YG+ R+D+ E + E + + + L SK K++ TR YN + H Q L Sbjct: 194 LTFCFSGVLEQLSRDAAQDLVKTLGGRVTTAVSSKTDYLVVGNVLEDGRDYQQGSKYKKAMELKSVVIVRGEELFYGLLQTYHDLCGPVVAPAVASTLVSAPPSVPSNPYSTATAATKVNPYAKXXXXXXXXXXXXXSYGRKAAPAMTSVTSNTTTMAVAPVLGDTSSMLWVDKYKPTSAREILGNQDAVKKLTQWLNSWERIF-NTTQNSNKTFSAPNGPWKAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDI------TGSQTIDFTTQAKKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERANDINKDDILRVSLFDAAKQLLEGRQGLNGSTPEQERDSFFRRHDAFFVDYGFTGLLVQQNYLKVLQGPFGEAKRKNAASQLEVLHRMSDAAEALSDYDLAENQLRGG-QNWSLLPLCSSLIVKTGFHASGPNGGFLPGFPEFTSWLGRNSTKGKKYRLLSELQHHLN-YSISGGGSETRLSYLPVLRTRLLQLLQAD-DAQAAIDFMDEYGLDRDDVFEKLDEFMLS-SSKAATFNDLSSKKKASFTRLYNQTAHSSQAL 855
BLAST of NO24G01080 vs. NCBI_GenBank
Match: CCA23408.1 (replication factor C subunit putative [Albugo laibachii Nc14]) HSP 1 Score: 410.2 bits (1053), Expect = 1.300e-110 Identity = 266/673 (39.52%), Postives = 366/673 (54.38%), Query Frame = 0 Query: 2 TFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAFTNG-KENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTALASSGSLAAKTSN------SKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNVKVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLVHLLR--EEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQGLGHTAIKGAKKGGGAGLATGVAVDEDGTPLESEA 666 TF ++G+ E R++ L+K GG IT SV++ T YL+ G+ LE+G + KYK A E N +IIS+ LYD+I+++ +W KYAP+++D++IG L +LG WL W+ IH K KKV TN EN GA+ LLSGPPGIGK+T LV++ GF E NASDTR+KK L+ LGD+L + AL S K ++ S+R+V+MDEVDGMSG DRGG ELI+LIK SK P+ICICNDR STKVRSLAN+ YDLR RP K I R+++I EGL+ +KNA+E VE GND+RQ L +Q W ++++TY D + +KD LRL+ F A + I LSF R +F+DY LLPL++E+NY+ I S + T +K+ + AA+ +++ D+V + Q W+LL QAALNV +A F+ P F +WLGK SS NK +RLL EL++ M S S +RL+Y+P +K L+ L EE + +E LDA +SREDL E+M F P ++ L+SK K++ TR+YN + H Q L A+ KK G T A D P+ S+A Sbjct: 106 TFALSGIFENCSRDDCIHLIKVCGGSITNSVTRNTNYLVLGTKLENGNDPKTSMKYKDAIE-KNVQIISQADLYDLIKEAPETPAKQASKPNMQQQSPVNKTSTNY------------------------------------------LWVDKYAPKSLDNMIGNIELGRRLGQWLNDWNNIHVKKVKKVPLTNKLSENRGAKCILLSGPPGIGKTTIATLVSKHCGFECIEFNASDTRSKKILKATLGDILGSQALNMHSSNTRKINSRSAIQLSRRVVIMDEVDGMSGGDRGGTAELIQLIKKSKTPVICICNDRQSTKVRSLANHSYDLRMRRPTKTQIVKRLLEIGTEEGLQIEKNAMEEAVERCGNDIRQSLMQMQKWKMVTNKVTYADLVGQ-QPHEKDDVLRLNPFSATQQIF--QQNLSFAKRNEAYFVDYDLLPLMIEENYVQSIMSTR-KTSDEKLEAIMKAASFIAEGDIVSKYVR-MQQRWDLLTKQAALNVGACIYAS-GFLGHPEFSRWLGKNSSANKSKRLLSELSIRMRS-HASGSRKVIRLDYVPYMKEILLTQLASGEEDCIGAVVERLDACEISREDLTESMESFKF-PGVKRHSYADLNSKDKASFTRSYNKAKHTSQVLVELALTSGKKTRG----TASAPRNDELPIPSDA 723
BLAST of NO24G01080 vs. NCBI_GenBank
Match: ETL97778.1 (hypothetical protein L917_04986 [Phytophthora parasitica]) HSP 1 Score: 410.2 bits (1053), Expect = 1.300e-110 Identity = 266/655 (40.61%), Postives = 362/655 (55.27%), Query Frame = 0 Query: 2 TFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAF-TNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTAL---ASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNV-KVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLV-HLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQG-----LGHTAIKGAKKGGG 646 TF +GV E+ RE+ LVK GG + S+++ T +L+ G+ LE G V++G KYK A N +I++++ Y++I ++ ++WT KY PQT+D +IG L KL WL W+A+H TKKV F T EN GA+ LLSGPPGIGK+T LVAR GF ELNASDTR+KK LQ L DVL AL A +G K ++R+++MDEVDGMSG DRGG ELI+LIK SK PIICICNDR S KVRSLAN+ +DLR RP K I R+++I +EGL +KNAIE E GND+RQ+L +Q W +++++TY D +KD++LRL+ F A + I + D LSF R +F+DY L+PL+V++NYI I + + + ++ M A+ +S+ DL+ N + +Q W+LL QAA+NV Y AG FI P F +WLGK SS +K +RLL EL++ M S S +RL+Y+P +K L+ LL E N+ IE LD ++REDL E+M F P ++ LD+K K+A TR YN + HK Q LG T I KKG G Sbjct: 183 TFTFSGVLESLSREDAVHLVKSCGGSVANSITRSTKFLVIGATLEQGGNVTDGSKYKEAVA-KNVRILTQNEFYNLITEA----------------------------ATAQQSQDLAAEKAKIKAEAGGKTASTKGKQKLSSSINDELWTDKYKPQTLDHMIGNIELGRKLKTWLLDWEAMHVKGTKKVPFSTKLSENRGAKTVLLSGPPGIGKTTIANLVAREVGFECTELNASDTRSKKMLQTGLKDVLGTQALQFGAPTGKSKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLIKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKIQIGKRLMEIGLKEGLNMEKNAIEEAAERCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIF-QRD-LSFDARNEAYFVDYDLMPLMVQENYIQSIMNNRRSSDENLEAAMH-ASEFISESDLL-NTYVRVEQRWDLLTKQAAMNVGACVYSAG--FIGHPEFSKWLGKNSSASKSKRLLSELSVRMRS-HASGSREVIRLDYVPYMKEILLKKLLSGEDNIHEVIELLDECEITREDLTESMESFKF-PGVKRHSYSELDTKAKTAFTRMYNKASHKSQAVVESVLGSTTI---KKGRG 797
BLAST of NO24G01080 vs. NCBI_GenBank
Match: ETL97779.1 (hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 410.2 bits (1053), Expect = 1.300e-110 Identity = 266/655 (40.61%), Postives = 362/655 (55.27%), Query Frame = 0 Query: 2 TFVVTGVTEAFGREEVEDLVKQYGGRITTSVSKKTTYLLTGSVLEDGREVSEGRKYKTAQENNNTKIISEHALYDMIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWTSKYAPQTMDDLIGATGLASKLGNWLQQWDAIHRHKTKKVAF-TNGKENAGARAALLSGPPGIGKSTTVALVARLQGFTVYELNASDTRNKKSLQEELGDVLDNTAL---ASSGSLAAKTSNSKRLVVMDEVDGMSGQDRGGMQELIRLIKLSKVPIICICNDRGSTKVRSLANYCYDLRFPRPNKGTIAARMVDIAHREGLEADKNAIEHIVESVGNDVRQVLNTLQMWAKSSSRMTYMDAKTRLHAIDKDKNLRLSAFDAAKAILCETDRLSFLDRFNMFFIDYSLLPLLVEQNYIDVIRSRKGDTLQDKITRMDAAAAAVSDQDLVGNMIMGGDQHWELLPLQAALNV-KVGYHAGPSFIPFPAFPQWLGKYSSTNKRRRLLGELAMHMSGRRISTSSSSLRLEYLPALKTRLV-HLLREEGNVERAIEFLDAYGMSREDLMETMVELCFTPAGQKEPLQALDSKVKSALTRAYNSSVHKGQG-----LGHTAIKGAKKGGG 646 TF +GV E+ RE+ LVK GG + S+++ T +L+ G+ LE G V++G KYK A N +I++++ Y++I ++ ++WT KY PQT+D +IG L KL WL W+A+H TKKV F T EN GA+ LLSGPPGIGK+T LVAR GF ELNASDTR+KK LQ L DVL AL A +G K ++R+++MDEVDGMSG DRGG ELI+LIK SK PIICICNDR S KVRSLAN+ +DLR RP K I R+++I +EGL +KNAIE E GND+RQ+L +Q W +++++TY D +KD++LRL+ F A + I + D LSF R +F+DY L+PL+V++NYI I + + + ++ M A+ +S+ DL+ N + +Q W+LL QAA+NV Y AG FI P F +WLGK SS +K +RLL EL++ M S S +RL+Y+P +K L+ LL E N+ IE LD ++REDL E+M F P ++ LD+K K+A TR YN + HK Q LG T I KKG G Sbjct: 182 TFTFSGVLESLSREDAVHLVKSCGGSVANSITRSTKFLVIGATLEQGGNVTDGSKYKEAVA-KNVRILTQNEFYNLITEA----------------------------ATAQQSQDLAAEKAKIKAEAGGKTASTKGKQKLSSSINDELWTDKYKPQTLDHMIGNIELGRKLKTWLLDWEAMHVKGTKKVPFSTKLSENRGAKTVLLSGPPGIGKTTIANLVAREVGFECTELNASDTRSKKMLQTGLKDVLGTQALQFGAPTGKSKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLIKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKIQIGKRLMEIGLKEGLNMEKNAIEEAAERCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIF-QRD-LSFDARNEAYFVDYDLMPLMVQENYIQSIMNNRRSSDENLEAAMH-ASEFISESDLL-NTYVRVEQRWDLLTKQAAMNVGACVYSAG--FIGHPEFSKWLGKNSSASKSKRLLSELSVRMRS-HASGSREVIRLDYVPYMKEILLKKLLSGEDNIHEVIELLDECEITREDLTESMESFKF-PGVKRHSYSELDTKAKTAFTRMYNKASHKSQAVVESVLGSTTI---KKGRG 796 The following BLAST results are available for this feature:
BLAST of NO24G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01080 ID=NO24G01080|Name=NO24G01080|organism=Nannochloropsis oceanica|type=gene|length=5336bpback to top protein sequence of NO24G01080.1 >NO24G01080.1-protein ID=NO24G01080.1-protein|Name=NO24G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=724bpback to top Synonyms
Publications
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