NO24G01040, NO24G01040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01040 vs. NCBI_GenBank
Match: XP_005756374.1 (hypothetical protein EMIHUDRAFT_108057 [Emiliania huxleyi CCMP1516] >EOD03945.1 hypothetical protein EMIHUDRAFT_108057 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 87.0 bits (214), Expect = 1.300e-13 Identity = 87/335 (25.97%), Postives = 123/335 (36.72%), Query Frame = 0 Query: 4 SRYLHRIASSSTSRTAYMFGGMGGDGVLHDLWQLQLEGRWGERVRCTSLPLASSPTSPHPSYRFACSFNLVPSLDPPPLPQFST---------------------------XXXXXXXXXXXXXXXXXXXXXXVPP-------ARWGHSSVVVKGQGGRXXXXXXXXXAKVLIFGGSCPGEAFGDLWLWEGGRVGGRWREIEAADPGPGPRGGHSAAIVEEGWEGGEREGLRKRWMYVFGGNTLANSFADVWRLALEDGWLQEGGRRGGKGGGLARWEKVDVMGRERPPARVGHVSFAVGHRLYIYGGRDFIQGTFHSAQEIWCLNTNTFTWKSL 305 +R+LHR A+ T R Y+FGG G G +D+W L + +L A++P SP + R A VPS P P+ + S PP RW HS+V + GR +VL+FGGS PG F DL ++ +W + P R GH A V + M+VFGGNT SF D+W ++ L RW + G P RVGH +VG RL + GGR++ F + + +T+T W + Sbjct: 100 ARFLHR-AACPTGRLMYVFGGQGEAGEFNDMWVLD---------KRVALSEATAPGSPPRARRRAWRRVEVPSDTPAPVQRQSATLTAVGSQLLMFGGRWGESVFLNDAWLYDTLRGRWQCVHESEETYAELEAPPPRADQPCPRWAHSAV----RFGR----------RVLVFGGSAPGRCFSDLHWFDLATC--KWSRVAPEGRSPAQRSGHCACAVGDA------------SMFVFGGNTTRASFNDLWEFQVD----------------LNRWRPIKGSG-AAPSGRVGHTITSVGSRLLVLGGREYATNQFD--RVLHAFDTSTRRWSQV 377
BLAST of NO24G01040 vs. NCBI_GenBank
Match: CBN77449.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.9 bits (211), Expect = 2.900e-13 Identity = 79/280 (28.21%), Postives = 109/280 (38.93%), Query Frame = 0 Query: 110 VPPARWGHSSVVVKGQGGRXXXXXXXXXAKVLIFGGSCPGEAFGDLW------------LWEGGRVGGRWREIEAADPG----PGPRGGHSAAIVEEGWEGGEREGLRKRWMYVFGGNTLANSFADVWRLALEDGWLQEGGRRGGKGGGLARWEKVDVMGRERPPARVGHVSFAVGHRLYIYGGRDFIQGTFHSAQEIWCLNTNTFTWKSLHXXXXXXXXXXXXXXXEAGRTGVAIFPHPAGICVYGGLGPGGG--TMGGFLLLDIV----GLMKHRRRR 368 VP RWGH+ V +G + +FGGS PG AF LW L GR E A+ P RGGHSA +V + +Y+FGGN + F D+W + L D W +V+ + PPAR+GH + AVG+R+ I+GGR+F G F + ++ F TG A G+ + GG+ P G TM + LD+V G + RRRR Sbjct: 389 VPAGRWGHTMVEHRG--------------ALYMFGGSSPGTAFAGLWRLDVSVSPCVWSLMTPGRTAVSLEEGGLAEAAGGERPPARGGHSATVVRD-------------TLYIFGGNITQSMFRDLWAIDLPD---------------CKAWRQVEETD-DFPPARIGHSAVAVGNRILIFGGRNFKSGVFTCGLSCFDVDLQAFVHFPHAEAFSRKSSQPRGMWYGLRMTGHAAMHCSRGLLIVGGMLPIGQSFTMRAW-TLDVVTGCWGRKQQRRRR 624
BLAST of NO24G01040 vs. NCBI_GenBank
Match: XP_022839173.1 (Kelch-type beta propeller [Ostreococcus tauri] >CEF98267.1 Kelch-type beta propeller [Ostreococcus tauri]) HSP 1 Score: 74.3 bits (181), Expect = 8.800e-10 Identity = 56/180 (31.11%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 111 PPARWGHSSVVVKGQGGRXXXXXXXXXAKVLIFGGSCPGEAFGDLWLW----EGGRVGGRWREIEAAD--PGPGPRGGHSAAIVEEGWEGGEREGLRKRWMYVFGGNTLANSFADVWRLALEDGWLQEGGRRGGKGGGLARWEKVDVMGRERPPA-RVGHVSFAVGHRLYIYGGRDFIQG 284 P ARWGHS+V + G K+++FGGS F D WL E ++ W + + P P PR G +A +V ++Y+FGG +++ F DVWRL L G RWE+ G PPA RVGH + +G R+ + GGR +G Sbjct: 283 PAARWGHSAVSLDG--------------KLILFGGSNTTHCFNDTWLLELVVENNKLVATWTLLVDGNKMPAPPPRAGQTACLV-------------GTFLYIFGGCHISDVFNDVWRLDL-----------SAVGRSSLRWERFLADG--TPPAPRVGHAAVVLGDRIILCGGRGSARG 422
BLAST of NO24G01040 vs. NCBI_GenBank
Match: OUS48575.1 (hypothetical protein BE221DRAFT_203722 [Ostreococcus tauri]) HSP 1 Score: 74.3 bits (181), Expect = 8.800e-10 Identity = 56/180 (31.11%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 111 PPARWGHSSVVVKGQGGRXXXXXXXXXAKVLIFGGSCPGEAFGDLWLW----EGGRVGGRWREIEAAD--PGPGPRGGHSAAIVEEGWEGGEREGLRKRWMYVFGGNTLANSFADVWRLALEDGWLQEGGRRGGKGGGLARWEKVDVMGRERPPA-RVGHVSFAVGHRLYIYGGRDFIQG 284 P ARWGHS+V + G K+++FGGS F D WL E ++ W + + P P PR G +A +V ++Y+FGG +++ F DVWRL L G RWE+ G PPA RVGH + +G R+ + GGR +G Sbjct: 283 PAARWGHSAVSLDG--------------KLILFGGSNTTHCFNDTWLLELVVENNKLVATWTLLVDGNKMPAPPPRAGQTACLV-------------GTFLYIFGGCHISDVFNDVWRLDL-----------SAVGRSSLRWERFLADG--TPPAPRVGHAAVVLGDRIILCGGRGSARG 422
BLAST of NO24G01040 vs. NCBI_GenBank
Match: GAQ79092.1 (Acyl CoA Binding Protein [Klebsormidium nitens]) HSP 1 Score: 67.0 bits (162), Expect = 1.400e-7 Identity = 73/308 (23.70%), Postives = 104/308 (33.77%), Query Frame = 0 Query: 3 PSRYLHRIASSSTSRTAYMFGGMGGDGVLHDLWQLQLEGRWGERVRCTSLPLASSPTSPHPSYRFACSFNLVPSLDPPPLPQFS--------TXXXXXXXXXXXXXXXXXXXXXXVPPARWGHSSVVVKGQGGRXXXXXXXXXAKVLIFGG-SCPGEAFGDLWLWEGGRVGGRWREIEAADPGPGPRGGHSAAIVEEGWEGGEREGLRKRWMYVFGGNTLANSFADVWRLALEDGWLQEGGRRGGKGGGLARWEKVDVMGRERPPARVGHVSFAVGHRLYIYGGRDFIQGTFHSAQEIWCLNTNTFTW 302 P RY H +A ++ GG G L+DLW L LE RV + +P S P L PPPLP + + ++W R +++++FGG + D+ + + W + P PR H+A + R+M VFGG TLAN + D+ L LE W + + G + P R GH S A+G YI GG D H + LN N+FTW Sbjct: 197 PPRYQHEVA--VVGDQLFVVGGNSGGRYLNDLWVLSLENFTWSRVE----QIGPAPPSKEED---------APLLAPPPLPPLAGHSIIASGSTLLAVGGHTKEPAPTVQVRSFDTTTSKWSILETTGDAPAARGGQTVVKAGSRLVLFGGEDRKRKLLNDVHVLD--LETKAWDSPSTSGAPPSPRCDHTATL------------HNGRYMLVFGGGTLANCYNDLHLLDLE----------------TFEWSRPETHG-DTPHPRSGHASVAIGDTWYIVGGGD----NAHGIADTLALNLNSFTW 454 The following BLAST results are available for this feature:
BLAST of NO24G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01040 ID=NO24G01040|Name=NO24G01040|organism=Nannochloropsis oceanica|type=gene|length=3089bpback to top protein sequence of NO24G01040.1 >NO24G01040.1-protein ID=NO24G01040.1-protein|Name=NO24G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bpback to top Synonyms
Publications
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