NO24G01020, NO24G01020 (gene) Nannochloropsis oceanica

Overview
NameNO24G01020
Unique NameNO24G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1928
Alignment locationchr24:283946..285873 -

Link to JBrowse

Properties
Property NameValue
Description10-formyltetrahydrofolate synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:283946..285873 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004329formate-tetrahydrofolate ligase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000559Formate_THF_ligase
Homology
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: EJK59156.1 (hypothetical protein THAOC_20657 [Thalassiosira oceanica])

HSP 1 Score: 452.6 bits (1163), Expect = 1.000e-123
Identity = 217/318 (68.24%), Postives = 263/318 (82.70%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACE-EPPLKFKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E+TPV+VHAGPFANIA GNSSIVAD++ALKL G DG+VVTE GFGADIGMEKFFNIKCR SGL P  AVIVAT+RALKMHGGGP V+ GKPL   YK EN+ LVT GC NLV HI+NA K+GV  +VAIN+F TDT  E+ A++ AS+ AGAF AV+S+HW++GG GA  LG AVI AC+      FKFLY   + I+EK++TI KE+YG DGV++SE AE+QI+ YE++G+G+LP+C+AKTQYS SCD  AKGVP GF++ VREIR+CVGAGFLY + GDIMTIPGLPTRPGFYDVDID +TG+++GLF
Sbjct:  332 LPTLMQTVERTPVLVHAGPFANIAIGNSSIVADKLALKLAGEDGYVVTEAGFGADIGMEKFFNIKCRESGLKPKCAVIVATVRALKMHGGGPPVSAGKPLASEYKEENIPLVTAGCSNLVKHIQNAKKFGVNVVVAINQFKTDTAEEMNAIRDASLEAGAFDAVVSNHWAEGGKGAEALGHAVIMACKANDETNFKFLYDLNSPIREKVETISKEIYGADGVDFSELAEQQIRQYESSGFGNLPICIAKTQYSFSCDPKAKGVPKGFRIYVREIRSCVGAGFLYPICGDIMTIPGLPTRPGFYDVDIDTSTGQVLGLF 649
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: XP_002288410.1 (formate-tetrahydrofolate ligase [Thalassiosira pseudonana CCMP1335] >EED93846.1 formate-tetrahydrofolate ligase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 452.2 bits (1162), Expect = 1.300e-123
Identity = 213/318 (66.98%), Postives = 265/318 (83.33%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK-FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E+TPV+VHAGPFANIA GNSSIVAD++ALKL G DG+VVTE GFGADIGMEKFFNIKCR SGL P  AVIVAT+RALKMHGGGP V+ GKPL   Y  EN+ LV  GC NLV HI+NA K+GV  +VAIN+F +DTP E+EA++ AS+ AGAF AV+S+HW++GG GA  L +AV++ACE+   + FKFLY     I++K++ I KE+YG DGV++SE AE+Q+K YE++G+G+LP+C+AKTQYS SCDA+AKGVPTGF++ VREIR+C+GAGFLY + GDI TIPGLPTRPGFYDVDID  TG+++GLF
Sbjct:  336 LPTLMQTVERTPVLVHAGPFANIAIGNSSIVADRLALKLAGEDGYVVTEAGFGADIGMEKFFNIKCRESGLKPKCAVIVATVRALKMHGGGPPVSAGKPLAKEYTEENIPLVAAGCANLVKHIQNARKFGVEAVVAINQFKSDTPGEMEAIRQASLNAGAFDAVVSNHWAEGGKGAENLAKAVVSACEKSKSENFKFLYDLNLPIRDKVEAISKEIYGADGVDFSELAEQQMKQYESSGFGNLPICIAKTQYSFSCDASAKGVPTGFRIFVREIRSCIGAGFLYPICGDIQTIPGLPTRPGFYDVDIDVKTGQVIGLF 653
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: ETI52753.1 (hypothetical protein F443_04211, partial [Phytophthora parasitica P1569] >ETL99195.1 hypothetical protein L917_03930, partial [Phytophthora parasitica] >ETM52347.1 hypothetical protein L914_04038, partial [Phytophthora parasitica] >ETO81432.1 hypothetical protein F444_04264, partial [Phytophthora parasitica P1976])

HSP 1 Score: 448.7 bits (1153), Expect = 1.500e-122
Identity = 215/320 (67.19%), Postives = 254/320 (79.38%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+T+RALKMHGGGP V  GKPLDPVY  EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P EVE VK  ++ AGA AAV S HWS+GG GA ELG AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  383 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDPVYVEENLEMLERGCANMQHHIRNALKFGVAVVVAVNVFATDSPREVELVKQKALEAGATAAVESTHWSEGGKGAKELGRAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 702
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: ETK92632.1 (hypothetical protein L915_04071 [Phytophthora parasitica] >ETL46042.1 hypothetical protein L916_04023 [Phytophthora parasitica] >ETP22591.1 hypothetical protein F441_04162 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 448.7 bits (1153), Expect = 1.500e-122
Identity = 215/320 (67.19%), Postives = 254/320 (79.38%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+T+RALKMHGGGP V  GKPLDPVY  EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P EVE VK  ++ AGA AAV S HWS+GG GA ELG AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  384 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDPVYVEENLEMLERGCANMQHHIRNALKFGVAVVVAVNVFATDSPREVELVKQKALEAGATAAVESTHWSEGGKGAKELGRAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 703
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: ETP50558.1 (hypothetical protein F442_04181 [Phytophthora parasitica P10297])

HSP 1 Score: 448.7 bits (1153), Expect = 1.500e-122
Identity = 215/320 (67.19%), Postives = 254/320 (79.38%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+T+RALKMHGGGP V  GKPLDPVY  EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P EVE VK  ++ AGA AAV S HWS+GG GA ELG AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  384 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDPVYVEENLEMLERGCANMQHHIRNALKFGVAVVVAVNVFATDSPREVELVKQKALEAGATAAVESTHWSEGGKGAKELGRAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 703
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: KUF98623.1 (hypothetical protein AM588_10009387 [Phytophthora nicotianae])

HSP 1 Score: 448.7 bits (1153), Expect = 1.500e-122
Identity = 215/320 (67.19%), Postives = 254/320 (79.38%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+T+RALKMHGGGP V  GKPLDPVY  EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P EVE VK  ++ AGA AAV S HWS+GG GA ELG AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  319 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDPVYVEENLEMLERGCANMQHHIRNALKFGVAVVVAVNVFATDSPREVELVKQKALEAGATAAVESTHWSEGGKGAKELGRAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 638
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: OWZ21277.1 (Formate-tetrahydrofolate ligase [Phytophthora megakarya])

HSP 1 Score: 448.0 bits (1151), Expect = 2.500e-122
Identity = 213/320 (66.56%), Postives = 256/320 (80.00%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+TIRALKMHGGGP V  GKPLDPVY  EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P+EVE VK  ++ AGA AAV S+HW++GG GA +LG AV+ +C++   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  319 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRTSGLTPQCVVLVSTIRALKMHGGGPNVVAGKPLDPVYVEENLEMLDRGCANMQHHIRNALKFGVAVVVAVNVFATDSPSEVELVKKKALEAGATAAVESNHWAEGGKGAKDLGRAVVTSCDKMRAQGSPFKFLYPLEFSIPEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 638
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: XP_009529488.1 (hypothetical protein PHYSODRAFT_333950 [Phytophthora sojae] >EGZ15739.1 hypothetical protein PHYSODRAFT_333950 [Phytophthora sojae])

HSP 1 Score: 446.8 bits (1148), Expect = 5.500e-122
Identity = 213/320 (66.56%), Postives = 255/320 (79.69%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+TIRALKMHGGGP V  GKPLDPVY  EN+E++  GC N+ HHI+NA K+GV  +VA+N F TD+P E+E VK  ++ AGA AAV S+HW+ GG GA +LG+AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG+LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  359 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRTSGLTPQCVVLVSTIRALKMHGGGPNVVAGKPLDPVYVEENLEMLEVGCANMQHHIRNALKFGVAVVVAVNVFATDSPREIELVKQKALEAGATAAVESNHWALGGKGAKDLGQAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSERGYGNLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYVLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 678
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: XP_008901413.1 (hypothetical protein PPTG_08223, partial [Phytophthora parasitica INRA-310] >ETN13372.1 hypothetical protein PPTG_08223, partial [Phytophthora parasitica INRA-310])

HSP 1 Score: 446.4 bits (1147), Expect = 7.200e-122
Identity = 214/320 (66.88%), Postives = 253/320 (79.06%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+T+RALKMHGGGP V  GKPLDPVY  EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P EVE VK  ++ AGA AAV S HWS+GG GA EL  AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  383 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDPVYVEENLEMLERGCANMQHHIRNALKFGVAVVVAVNVFATDSPREVELVKQKALEAGATAAVESTHWSEGGKGAKELSRAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 702
[Close]
BLAST of NO24G01020 vs. NCBI_GenBank
Match: KUF78594.1 (Formate--tetrahydrofolate ligase [Phytophthora nicotianae])

HSP 1 Score: 445.7 bits (1145), Expect = 1.200e-121
Identity = 214/320 (66.88%), Postives = 253/320 (79.06%), Query Frame = 0 
Query:    1 MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTECGFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPLDPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEAVKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLK---FKFLYPAEASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQYSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 318
            +PTLMQT+E TPV VHAGPFANIAHGNSSI+ADQIALKL G DGFVVTECGFGADIGMEKFFNIKCR SGL P   V+V+T+RALKMHGGGP V  GKPLDPV   EN+E++ +GC N+ HHI+NA K+GV  +VA+N F TD+P EVE VK  ++ AGA AAV S HWS+GG GA ELG AV+ +CE+   +   FKFLYP E SI EK + I KE+YG DGVE+SE A++++  Y   GYG LP+C AKT  SLS D  AKGVPTGF VTVR+IRA VGAGF+Y L GD+MT+PGLPTRPGFYDVD+D  TG+++GLF
Sbjct:  319 LPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDPVXVEENLEMLERGCANMQHHIRNALKFGVAVVVAVNVFATDSPREVELVKQKALEAGATAAVESTHWSEGGKGAKELGRAVVTSCEKMRAQGSPFKFLYPLEFSIAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 638
The following BLAST results are available for this feature:
BLAST of NO24G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EJK59156.11.000e-12368.24hypothetical protein THAOC_20657 [Thalassiosira oc... [more]
XP_002288410.11.300e-12366.98formate-tetrahydrofolate ligase [Thalassiosira pse... [more]
ETI52753.11.500e-12267.19hypothetical protein F443_04211, partial [Phytopht... [more]
ETK92632.11.500e-12267.19hypothetical protein L915_04071 [Phytophthora para... [more]
ETP50558.11.500e-12267.19hypothetical protein F442_04181 [Phytophthora para... [more]
KUF98623.11.500e-12267.19hypothetical protein AM588_10009387 [Phytophthora ... [more]
OWZ21277.12.500e-12266.56Formate-tetrahydrofolate ligase [Phytophthora mega... [more]
XP_009529488.15.500e-12266.56hypothetical protein PHYSODRAFT_333950 [Phytophtho... [more]
XP_008901413.17.200e-12266.88hypothetical protein PPTG_08223, partial [Phytopht... [more]
KUF78594.11.200e-12166.88Formate--tetrahydrofolate ligase [Phytophthora nic... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01020.1NO24G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598318gene_7333Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101504g3gene9340Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01020.1NO24G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01020 ID=NO24G01020|Name=NO24G01020|organism=Nannochloropsis oceanica|type=gene|length=1928bp
ATGCCCACGCTGATGCAGACCATCGAGCAGACCCCTGTCATGGTGCACGC
Ggtacgcccctccctccctctcttcctcccttcttgcgcggtggtgttcg
aggaggaggttgagccctcattcccgcctcgccgtcgcgctcaccgaccc
tcccctccctctctccctcccttcctccctccagGGCCCTTTCGCCAATA
TCGCTCACGGGAACAGCAGCATCGTGGCGGATCAGATTGCCCTCAAGCTT
GTCGGCCCCGACGGCTTCGTCGTCACCGAGTGCGGCTTCGGCGCTGATAT
CGgtacgtcttcctcccctctctcgctttgcacctgtttcccccagaccc
tcggtttctctcgccctatctctcgccctatctcacacatttccttctcc
actccacaactttcaccaccttatccgccctctcgccctccctccctccc
ttgcttccccccttacccccttatttgtctagGCATGGAGAAGTTCTTCA
ACATCAAGTGCCGCAACTCGGGCCTGGTGCCCGACGTAGCCGTCATCGTC
GCCACCATCCGCGCCCTCAAGATGCACGGCGGgtacgtcctccctccctc
cctccctcccttccttcctccctccctttccctctcatgtccttgccccg
cgcccatctcgcctcttgagatctcccctttctccttccctccctcccgc
cttgcctctctccccagAGGCCCAGCAGTGGCGGGTGGGAAGCCCCTCGA
CCCCGTCTACAAGACGGAGAACGTGGAGCTGGTGACCAAGGGCTGCGAAA
ATCTCGTGCACCACATCAAGAACGCAGCCAAGTACGGCGTGCGCTGCATC
GTGGCCATCAATAAGTTCGTCACCGACACACCCGCGGAGGTGGAGGCTGT
CAAGgtacgcgccctccactgctccttccctacatccctcccttccttcc
tcagtcacgcgcaaacttagaccctcaccaggaaacggggcagtcggtca
gtaaaacaaaaaattcataccttttaatcaccccttccctccctccctcc
ccctctctcctcttcccccctccctccttcccttcctcagGCTGCCTCCA
TGGCCGCCGGCGCCTTCGCGGCCGTCATGTCCGACCACTGGTCCCAGGGA
GGGGCCGGCGCAGTTGAGCTGGGCGAGGCCGTGATCGCAGCCTGCGAAGA
GCCCCCCCTGAAGTTCAAATTCCTCTACCCGGCCGAGGCCTCGATCAAGg
tgggtcttccccctctccctccctctctcgtctatctatggtgggattgc
ccttcgtttctactgtcattcacgcccccccccccccccccgcttctttc
gtcccccctctggtcctcttgcagGAGAAGCTGGACACCATCGTGAAGGA
AATGTACGGCGGGGACGGGGTGGAGTACTCGGAGACGGCCGAAGAGCAGA
TCAAGGCCTACGAGGCCGCGGGCTACGGCCACCTGCCGCTGTGCGTGGCC
AAGACCCAGTACTCCCTCTCGTGCGATGCGGCGGCCAAGGgtacggaagc
tcatgccctcctttctcattcaccgttccctttgcccttcccccttccct
gtctcgctgcctgctttactctcctgcctccttgatcagacgagcccccg
tgctgtctgcactcttctcccccctccacgtaccctccaagacgtatgcg
cacacacccacttctcacactctcaacacactcttgaaccaacacacacg
cgcagGCGTGCCCACGGGCTTCAAGGTGACGGTGCGGGAGATCCGCGCGT
GCGTCGGGGCCGGGTTCCTGTACGCCCTGGCTGGCGATATCATGACTATT
CCCGGCCTCCCCACCCGCCCGGGCTTCTACGACGTGGACATCGACTTTGC
CACGGGCAGGATTGTCGGCTTATTTTAA
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protein sequence of NO24G01020.1

>NO24G01020.1-protein ID=NO24G01020.1-protein|Name=NO24G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp
MPTLMQTIEQTPVMVHAGPFANIAHGNSSIVADQIALKLVGPDGFVVTEC
GFGADIGMEKFFNIKCRNSGLVPDVAVIVATIRALKMHGGGPAVAGGKPL
DPVYKTENVELVTKGCENLVHHIKNAAKYGVRCIVAINKFVTDTPAEVEA
VKAASMAAGAFAAVMSDHWSQGGAGAVELGEAVIAACEEPPLKFKFLYPA
EASIKEKLDTIVKEMYGGDGVEYSETAEEQIKAYEAAGYGHLPLCVAKTQ
YSLSCDAAAKGVPTGFKVTVREIRACVGAGFLYALAGDIMTIPGLPTRPG
FYDVDIDFATGRIVGLF*
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Synonyms
Publications