NO24G01010, NO24G01010 (gene) Nannochloropsis oceanica

Overview
NameNO24G01010
Unique NameNO24G01010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4680
Alignment locationchr24:278851..283530 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:278851..283530 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01010.1NO24G01010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01010.1NO24G01010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01010 ID=NO24G01010|Name=NO24G01010|organism=Nannochloropsis oceanica|type=gene|length=4680bp
GGCCTCCGAGCAAATGTCTGGAGGGACAGAGTCCAGGCCGCTCTCTGTTG
TATTGTTTAACGAATGTACGTGCCATGGGTTTCGCTTCTTTTTTTTTTAA
ACAACGATTCCGGGAGCGAATAGTCGACATACACTCGTAAAGCCCAGACC
TGGCAGAATTCGTTGTCTGTGTGGTGTGCCCATGCACATATATACATGTT
GCATTTACCATTTGGGCGGCGAAAATGCCTCTTCCATGGGACACCACCAG
CCATCCAATACAGACCGAATGCTTCAGAGTCTACAGATCCTTAGCATGAA
ATCTTATGGACCAAGAAATTTTAACCCTCTCCATCAAAACAAGCGCGATC
TCCCCGGCGCATCGTGCCAGTCCCTCTCGTCGCTGCTGTTCTTGCTTGCT
GCAGCCCGCTTCTTCGCTCTTTACGCCGTTGCACCCGTTGCTTGGAGGCT
CATGCGCATTCTGCGAAGCATTTTCTGGGAAGTCAGAAAAGTGCATGGCT
GCGACAAGCTCTGAAAGATAGGGCACAAATTTCCTCGAAGCCTTGACTTT
GACGCCACTGCTGCGGTGATCAAAGCGTGGCAGTCTTCTGCGGTGTACAT
CACCGCCTCTCCGCATAAAGCAACGAAGGAAAAGGCGCCCAAGCCTTTGT
GTCTTTGTGGGCAGCCACCTTGCGGCGCAAATATAAACACAGAGGAATGG
TCACACTGGCAACGGTGGCATCAGGCTGTAGAGAGATGAGCACGTTTGCG
TGCCCTCTGCCGTAGTGTAGTGCCCATGTAGACATCAAGGCGGGAGTGCG
CGTCATTCTTCTTTGCCCACGCGCCCCCCTCAGCTCCAGGCACACTTCAT
TCAATGGCATCCTCTCGATCCTCACCACACCCAAATCCCTCAGGAGTAGA
ACCCTGTTCTATCAGTCGGCATATCCAGCAACAACAAGCTGTGTTCGGAT
CAGCAGGCATAGTTTTGTTCAGAAGTGAGGAGGAGCACGAGACTTGTCTT
TTCTTCTTTCTTCTCACCTAGTCATTCAAGCGACCAAGACTAGAAAAATC
TCGGCATCAGATAAGAAAGACCAAAGAGCATCATGTACAAGTCTTACAGC
CGGGATTATTGGGGTGGAGGGCCGCAGCAGCAGCGGCAGCAGCAACAGCA
GCAACCTCGACTGGAAGACGGGGAGAGGGAGGAGAAACAGCGGCAGCAAC
AGCTCGCGCAGCCACAACAAGAGCAACACCCATATCTGGCGTCGTCCCTC
TTCGAATCCAACGCATTTTACAACCTCGGCCGGGTCCTGTCGATGGAGCA
GCAGCACCACCATCACCACCAGCACCAGCACCAGCACCAGGAGAAGCAGC
AGGAAGGAGGCGACACAGAGGGGGAGGTGTACCATGGAGGGTACCAGTAC
CACCACTATCAGAATCTAACCTTGAATGGGCTGGCAGACTCAGCACCCGT
GCCCCCGTGCAGAGGGCGACGGCCGGATGGGAAGTTTGGGGAGGGGGAAC
AGGAGGAGGGGCAGGACAGGAGGAGCAGCACGGGCAAGGGGAGGTGTTTG
AGGAGCGAGACGGGTCGTATTTGGTGTGCAGCATTCGCCCGCAGgtacgg
aggaggagaagggaaaaatgcgtgtaggaagagaggaggaagaggaggag
gatgggggaagaagaaaccgcatgtcgaatgcctgatacctcgtggttac
tcccacttctctccgctggctttcctgccgccagtcaggtctggcctgtc
atccttgtgctcgtctccaccaaccctcaccttctcgccttcccttctgc
cttccttctatctgtcccttcccatcagGATGTCCCCCTCCCGGCGCCGT
CCCCCTGCCCTCCTACTTTCAGACCGGCGAGCAGGAGCTGGCCACGCAAG
AGCAGGAGGCCCGCTGCCGGTCCGTCTGCGACCAGCTCTCCCTTCTCCGC
TTCCCTCCCTCCCTGCTGCCCTCCCTGCCGTCCCTCTCCTCCCTGTCCCC
TTCCTCCTCCCCCTTCAAGTTTTCCCGGGAGGTCTACCTCCCGCATCGAA
GCCAGGGCAGGGGGCGGGGGGGAGGAGCGTCCGCGGCGTCCTTGGCCTCG
ATGAAGTCGGGGGGGACGGGCTTCTGCAAGgtacgggacgacggacggac
ggacggacggacggacggaaggagggacggaacgactgagaaagctttta
cagttccctctctccgtgttgtcatgttctctgcccctttttgctcacac
cactaccgctccgtccctccctccctccctccctcccttctttcttgcag
gccaagcttttatagttccctccctccgtgttgtcatgttctctgcccct
ttttgctcacaccactaccgctccgtccctctttccctccctccctccct
tctttcttgcagGCCCTCCTGACCCTCCAAGCATTGCAGATTTCCTCCGG
GACGTCATGCCGCCCTCTTCCCTCCCCTCCTTCTCCTCTATCTCCTCCCC
CTCCTCCTCCCCTCGCCCCTCCTCTCCTCCCTCCATCTCTTCCTTCTCCT
CGTCCTCCCACTCCTCTGTCATCAGCTTGGACAATTTCCGGGTCCTGTAC
CGCTCTTTCGCTCACTTTCTCTACACCTCTTTCAAGAGCGGCAGCAGTGC
TAAGGGAGGGAGGGAAGGAGGGAATCTGCGGTTGTCGAAAGAGGGAGGGT
GTTGCTTCCTTCTAGGAGTGGCCTTGGGCTGTGTGCTGTGTGTCTCCATC
CTGCTGGCTCCGGCGGGGAGGGAGGGAGGGGGGGAGAGCTCGAGGGAGGG
CTGCTGCGGACGGCGACGACGGGAAGGCGCCCGATCTTCCCGGCTCTAGG
AAACTTTCGTGgtaaagaggggggggagagggagggagggagggagggag
ggaaggagggaggattttcccgattcttgttatcgtgctaactaaaccaa
cgcggcgttctccctcgccgcacaacaattacacgcacagATGTCCTTTG
CATCTCGTCCCCTTCCTCACCCTCCCACTCCCGCTCCTCCTCTTGCGCTG
GTGGCGGCATCCTGGACCGTGTGATGAAGGAATGGGAGCACTCATCCAAG
GCCCCCAGCACCTCCCCTTCGCTTTCCTCCCCGgtacgacctccctccct
ctctcgaccgcccgcacttctctatcgccctattgtttctcatctttccc
tccctccttttctcccctagCTCCCTCTGCCGTCGCCGCCACCACTATAA
GCAGCGACGACGACAACGACCCCAGCAGCAGCAGCGGCAAGGAAACCCTT
CCCACCCCGCCTTCCTCCCCCTTTCCTCCCTCTCCCTCTCCCTGGGCGGG
CAACGCAAGTCCCAGCACATCATTACCAAGCCTGTCCTCACCTCTCCCTC
ATCCTCGCCCTCCACCCCGTCCTCCCGCCCGCCCGCCCTCCCTCCCTCCT
CCTCGGGCGGCTTCCGAGCTCTCTTGGAGTCCTACCTGTGGGCGGAGCGC
GCCCAGGAAGACGGAAAGGAAGGGAGGGAGGGTGAGGCAGGGAAAGAGGA
AGGCCAGAGGCGGTTCACCTTGCCGAACGGGAAAGTGTTGGTGGCGACGG
TAAAGGGGGCGACGAGGGAGGCCTGGCACATCATCTCCTCCTCCCTCTGC
TCCTTCCTTTTCCTCCTCCTCCGCCGCCTCCCCTTCGTCCCTCCCCATAT
AGGCCGGCGGCAGTGGGGGAAGGGGGATAAGGAGGAGGGAAAAGTGGAGT
AGGGGGGAAGGAGCGCGGGAGGGCGGAGGGAAAGCATGAATTGAAGATGT
ACGTAGCGAAGAAAAGACGAGAAAAGAGGTGGTACATAACAAAGATGAGC
ATAGGATCCCATCCTCTATAACCCCTCCTCCTCCTCCTCCTCCTCCTACT
CTATCCCTTTCTCCTCCTCCTCCTTGTGTAGAGAGATAAGTAAGGACCGA
GAGGAAGGGAGTAGAGGGGGGGAGGAGGGAGATGCTTGCACTCATGAACG
AGAACGCCAAAGAGGCAAATTTTGACATTGAAAAACAAATAGAAGAAAGG
AAAAGTGTAGTGTGGAAAACGAACGAAAAGGAGAAAGAGGAAAATGAAGA
GTAGGGGAAAAGTCAACATGAATCCAAGTGAATAACGTGCGAGGGGCGCA
AAGCGAAGGATGAAAGGGCAAGAAAGGGAGAGGATATGGAAGGTAAAGAG
GCTTATGAGGCGCTCCTTGTTATCTTCTTTTCCAACTGTCTCCTCCTTCC
ACGCCTCCCTCCCTCAATGTATGATGTTAAATTCTACAGCTGCAGAGGGA
AGAGAGACTTAGACAAAGACCAAGAGTGTAAGTGAGTAAGGGAGGAAAGA
AAGGAAGCCGGTACAGAAATTAAGAAGACAGGAAGCAGACACGCGACGAT
CGAAGACACGTACATACAAAGAATTCCCCCGCCCTCTCTGCCTTCGCTTT
CCTCCGCGCCAGAGAATTATAAGTCTGAGACCGTTGCGAGAAAAGAAGGA
AGAGAGGGCGGGAGAGAGGAACGCGGGGGTACGTAGATAGAGGGCACAGA
CCGCAGAGGCTACTGGTACAAAGACGTTTGTGGAAAGTGCAATGTTGTGA
TAAGACAAGCAAGTAGTGAGAAAAAAGGGAAGAAAGGTTGATGAGAAAGA
AAGAAAGAAGCGTGTAAGTGTGTGTGAGAG
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protein sequence of NO24G01010.1

>NO24G01010.1-protein ID=NO24G01010.1-protein|Name=NO24G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MYKSYSRDYWGGGPQQQRQQQQQQPRLEDGEREEKQRQQQLAQPQQEQHP
YLASSLFESNAFYNLGRVLSMEQQHHHHHQHQHQHQEKQQEGGDTEGEVY
HGGYQYHHYQNLTLNGLADSAPVPPCRGRRPDGKFGEGEQEEGQDRRSST
GKGRCLRSETGRIWCAAFARRMSPSRRRPPALLLSDRRAGAGHARAGGPL
PVRLRPALPSPLPSLPAALPAVPLLPVPFLLPLQVFPGGLPPASKPGQGA
GGRSVRGVLGLDEVGGDGLLQGPPDPPSIADFLRDVMPPSSLPSFSSISS
PSSSPRPSSPPSISSFSSSSHSSVISLDNFRVLYRSFAHFLYTSFKSGSS
AKGGREGGNLRLSKEGGCCFLLGVALGCVLCVSILLAPAGREGGGESSRE
GCCGRRRREGARSSRL*
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Synonyms
Publications