NO24G00990, NO24G00990 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO24G00990 vs. NCBI_GenBank
Match: EWM25941.1 (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana]) HSP 1 Score: 474.9 bits (1221), Expect = 7.200e-130 Identity = 225/435 (51.72%), Postives = 305/435 (70.11%), Query Frame = 0
Query: 145 PEALLPYRVIDENDKRAAVEYDVEADSRIHPGSTSPACQWHVKFAFNYTSQGLIEPQASYFAEIITGASAGIAYKIKGRFPPALYFSWQVYNSLFVGEAAKGITDFEIKPHWGKNPVVDATATPETSGGYELYLTPTGEEGYDNELPLPRGITNTLILRTFKPDPVVMGEFGRVEDIEPPVLYVGNNMADGSRQWQALPPCSAAQKRRIGNLATGFYNVNYPQATGTLGRGV--VLQDFNCPLSPERGNTSMVLFEGAWLPTQVQNLVARQSSDSPYLFYCINPNNDYRKYWNSLIKIRFKLPSFPYSLFAPTKVANKEMYDMRFFSIATADSVLPQPTIASLDGAAIKRKYN--NTQGSGWDGWVEIRIAVSEEKARACNFWDDNAIFLPLYSERVEPAKSITIIIRSVLGYGSQTAGAASRACAGGWSAGTRP 576
P A L + +D++DKRAA+E+DV+ + + G + P C WH K+A NYT GLI+P A Y+ +++ G+ A +AYK+KGRFP ++YFSWQVY S + ITDF +KP WG NP + ATPE GGYE+YLTP+GEEGY NEL LP N LILR +KPDP ++G + D+EPP LY+ ++M +G R+W+ALP CSAA+++ + +L+ +Y + YP ATGT GRGV +L++ NCP++P +GN S VLF+G WLP ++ +ARQS DSPY+ YCINP ND+R Y N+L+KIRFKLP LF+ +VAN Y++R+ S++TAD PTIAS+DG ++R YN + S WDGWVEIR+A++E KARACNFW D AIFLPL E V PAKSI + +RS+L +G ++AGAAS+AC G P
Sbjct: 90 PVAALQFPTVDQDDKRAAIEWDVDT-NEVARGYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRLPNATINQLILRMYKPDP-ILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLPPEL--AIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGF--YPTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPLEVEDVHPAKSIVLFLRSILAHGPKSAGAASKACGNSALCGNPP 518
BLAST of NO24G00990 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 119.0 bits (297), Expect = 1.000e-22 Identity = 100/382 (26.18%), Postives = 158/382 (41.36%), Query Frame = 0
Query: 177 STSPACQWHVKFAFNYTSQGLIEPQASYFAEIIT-GASAGIAYKIKGRFPPALYFSWQVYNSLFVGEAAKGITDFEIKPHWGKNPVVDATATPETSGGYELYLTPTGEEGYDNELPLPRGITNTLILRTFKPDPVVMGEFGRVEDI---------------EPPVLYVG------NNMADGSRQWQALPPCSAAQKRRIGNLATGFYNVNYPQATGTLGRGVVLQDFNCPLSPERGNTSMVLFEGAWLPTQVQNLVARQSSDSPYLFYCINPNNDYRKYWNSLIKIRFKLPSFPYSLF-APTKVANKEMYDMRFFSIATADSVLPQPTIASLDGAAIKRKYNNTQGSGWDGWVEIRIAVSEEKARACNFWDDNAIFLPLYSE 536
S P C W + + L++P A Y ++++ A YKI FP +YFS++ Y+ G + D I P WGKNP + T T E +G YE+Y+T G +G+ NE+ RG++ T F RV D +PP ++ G + D + W+ L PCS + + G + DF +++ W + +L++++ +D P LF P+ + + N ++ I P LF P V N Y R++S A AD +P PT +SL ++ Y G GWD +I A S + +AC D +A+FLP +E
Sbjct: 13 SEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYS--LRGHPLTSLPDLRIDPSWGKNPYREET-TEEGAGTYEIYVTRDGNKGWPNEV---RGLSEDHTNAT-------QAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQI--------------GWTVYDFR-----------YLIYHSQWYRLRSCHLLSKREADHPALF----PDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY----GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNE 348
BLAST of NO24G00990 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 107.8 bits (268), Expect = 2.300e-19 Identity = 84/320 (26.25%), Postives = 144/320 (45.00%), Query Frame = 0
Query: 218 YKIKGRFPPALYFSWQVYNSLFVGEAAKGITDFEIKPHWGKNPVVDATATPETSGGYELYLTPTGEEGYDNELPLPRGITNT----LILRTFKPDPVV----MGEFGRVEDIEPPVLYVGNNMADGSRQWQALPPCS----AAQKRRIGNLATGFYNVNYPQATGTLGRGVVLQDFNCPLSPERGNTSMVLFEGAWLPTQVQNLVARQSSDSPYLFYCINPNNDYRKYWNSLIKIRFKLPSFPYSLFAPTKVANKEMYDMRFFSIATADSVLPQPTIASLDGAAIKRKYNNTQ-GSGWDGWVEIRIAVSEEKARACNFWD 525
Y+I+G+FP YFS+ VY++ ++ + D +I+P GKNP D T + G YE+Y++ G +GY NE+ R + + L R DP G+ ++ P++ + N+ + +W + CS A + I NL F N +P+ N + E T LF+ P ++ VA ++++ Y+F+C+ + Y +I+I KLP PY LF +VA+ YD R+ S +AD++ P+ ++ I Y+ GS WD + A+ C ++
Sbjct: 159 YRIRGKFPYVRYFSFTVYDASL--QSISTLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPYALLAFRLQLLDPRAGEDRSGKNREWGYVDMPLVEILNHR---NGEWDIIRRCSDEFQARTEEVIENLDLTF-NTWWPK--------------NLQIGTECNATEFSLFDPEQNPI-IRRGVAVRNANENYIFWCMPKEIGKKDY---IIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKCGLYN 454
BLAST of NO24G00990 vs. NCBI_GenBank
Match: EWM24273.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 84.7 bits (208), Expect = 2.100e-12 Identity = 107/418 (25.60%), Postives = 169/418 (40.43%), Query Frame = 0
Query: 179 SPACQWHVKFAFNYTSQGLIEPQASYFAEIITGASAGIAYKIKGR-FPPALYFSWQVYNSLFVGEAAKGI-TDFEIKPHWGKN--PVVDATATPETSGGYELYLTPTGEEGYDNEL-PLPRGITNTLILRTFK-------PDPVV------MGEFGRVED---IEPPVLYVGNNMADGSRQWQALPPCSAAQKRRIGNLATGFYNVNYPQATGTLGRGVVLQDFNCP-------LSPERGNTSMVLFEGAWLPTQVQNLVARQSSDSPYLFYCINPNNDYRKYWNSLIKIRFKLPSFPYSLFAPTKVANKEMYDMRFFSIATADSVLPQPTIASLDGAAIKRKYNNT---QGSGWDG----WVEIRIAVSEEKARACNFWDDNAIFLPLYSERVEPAKSITIIIRSVLGYGSQTAGAA 562
+P C W + + N + QAS+ + ++ + G Y ++ P + +FS+Q Y+ G+ + GI D EI G N + A A E GGY LYLTP G +GY NEL L G + + F+ P P+ G+ + + PP + V M GS W+ +P C Q G L + Y LG L+D P + P R N + + + + LV+ + P D W ++ KLP P SL++P +AN+ YD+R+ S +A P T +L +I++ Y + WDG W+ A E+AR +NA+ + + E PA ++ +L +GAA
Sbjct: 62 APLCSWRLSQSLNV---AWTDTQASHHS-MVMFLNEGEEYTVESESLPYSRFFSFQTYS--LDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQRWGWTPPPRVSVRRTMRQGS--WREIPSCVTRQGPG-GKLWSKTY---------ILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAI----------PAVDVGDVW---ARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQARL-----ENALIM-RWGEVARPA----LLYNQLLSSSRAASGAA 438
BLAST of NO24G00990 vs. NCBI_GenBank
Match: EWM21087.1 (hypothetical protein Naga_102165g1 [Nannochloropsis gaditana]) HSP 1 Score: 79.0 bits (193), Expect = 1.200e-10 Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0
Query: 394 MVLFEGAWLPTQVQNLVARQSSDSPYLFYCINPNNDYRKYWNSLIKIRFKLPSFPYS 451
MVLFEG+WLP+QVQNLVARQSSD+PYLFYCINPNN+Y L+ LPS P S
Sbjct: 1 MVLFEGSWLPSQVQNLVARQSSDTPYLFYCINPNNNYH-----LLTSFSLLPSLPPS 52
BLAST of NO24G00990 vs. NCBI_GenBank
Match: XP_005855631.1 (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >EKU20720.1 hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 75.9 bits (185), Expect = 9.700e-10 Identity = 87/377 (23.08%), Postives = 144/377 (38.20%), Query Frame = 0
Query: 182 CQWHVKFAFNYTSQGLIEPQASYFAEIITGASAGIAYKIKGRFPP--ALYFSWQVYNSLFVGEAAKGITDFEIK---PHWGKNPVVDATATPETSGGYELYLTPTGEEGYDNELPL-PRGIT-------NTLILRTF------------KPDPVVMGEFGRVEDIEPPVLYVGNNMA----DGSR-QWQALPPCSAAQKRRIGNL-ATGFYNVNYPQATGTLGRGVVLQDFNCPLSPERGNTSMVLFEGAWLPTQVQNLVARQSSDSPYLF---YCINPNNDYRKYWNSLIKIRFKLPSFPYSLFAPTKVANKEMYDMRFFSIATADSVLPQPTIASLDGAAIKRKYNNTQGSGWDGWVEIRIAVSEEKARACNFWD 525
C W + + QA Y ++ + ++++G FP YFS Q N++ VG I D+EI+ P +NP + + P G Y + +TP G++G NEL L P +T N ++L F K DP R+ P + D SR +W+ P C + ++ +L + FY + P A P N + VL+ G + D+ YL + ++P + + ++ LP +LF K+AN + D+R+ S ++ V PT+ +LD AA R Y Q G +E+ R C ++
Sbjct: 134 CAWQAYITGKQYNVAYPDLQAIYQVLVMLKTTEKNIFRVRGSFPQEGVRYFSLQ-SNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDSDRP--IGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFA---------------PPVRHNKNNNFVLYLG----EDTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAEDPERTCGLYN 488
BLAST of NO24G00990 vs. NCBI_GenBank
Match: EWM30096.1 (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana]) HSP 1 Score: 72.8 bits (177), Expect = 8.200e-9 Identity = 82/341 (24.05%), Postives = 134/341 (39.30%), Query Frame = 0
Query: 218 YKIKGRFPP--ALYFSWQVYNSLFVGEAAKGITDFEIK---PHWGKNPVVDATATPETSGGYELYLTPTGEEGYDNELPL-PRGIT-------NTLILRTF------------KPDPVVMGEFGRVEDIEPPVLYVGNNMA----DGSR-QWQALPPCSAAQKRRIGNL-ATGFYNVNYPQATGTLGRGVVLQDFNCPLSPERGNTSMVLFEGAWLPTQVQNLVARQSSDSPYLF---YCINPNNDYRKYWNSLIKIRFKLPSFPYSLFAPTKVANKEMYDMRFFSIATADSVLPQPTIASLDGAAIKRKYNNTQGSGWDGWVEIRIAVSEEKARACNFWD 525
++++G FP YFS Q N++ VG I D+EI+ P +NP + + P G Y + +TP G++G NEL L P +T N ++L F K DP R+ P + D SR +W+ P C + ++ +L + FY + P A P N + VL+ G + D+ YL + ++P + + ++ LP +LF K+AN + D+R+ S ++ V PT+ +LD AA R Y Q G +E+ R C ++
Sbjct: 10 FRVRGSFPQEGVRYFSLQ-SNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDSDRP--IGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFA---------------PPVRHNKNNNFVLYLG----EDTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAEDPERTCGLYN 328 The following BLAST results are available for this feature:
BLAST of NO24G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00990 ID=NO24G00990|Name=NO24G00990|organism=Nannochloropsis oceanica|type=gene|length=9825bpback to top protein sequence of NO24G00990.1 >NO24G00990.1-protein ID=NO24G00990.1-protein|Name=NO24G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1204bpback to top Synonyms
Publications
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