NO24G00850, NO24G00850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00850 vs. NCBI_GenBank
Match: EWM21125.1 (Proteasome assembly chaperone 3 [Nannochloropsis gaditana]) HSP 1 Score: 188.7 bits (478), Expect = 1.000e-44 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 0 Query: 6 YNETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLTQPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPLL 118 Y+ETKEING+ TDV I N+SDR+FL ISQN+RFGTLISAKADDS+ +PGAAPSFDV+VLLGRRDDPLLLIYARQLVE +S+SSSRPLLLSISLRERDP TFE+V WVRPLL Sbjct: 74 YHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185
BLAST of NO24G00850 vs. NCBI_GenBank
Match: XP_009526780.1 (hypothetical protein PHYSODRAFT_351247 [Phytophthora sojae] >EGZ17722.1 hypothetical protein PHYSODRAFT_351247 [Phytophthora sojae]) HSP 1 Score: 100.5 bits (249), Expect = 3.600e-18 Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 0 Query: 8 ETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLT---QPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 E KEING+PTD+ + ++DRVF+V +Q FGTL+ A DS++ QP D++V LGRRDDPLLL+YARQ +E P+L +I L++R TFE VM+ V+ L Sbjct: 15 ERKEINGVPTDIAVSIFADRVFIVATQLGTFGTLVEAHQKDSISGKLQP------DIHVRLGRRDDPLLLVYARQFLEHFGVPVGLPILAAIGLKDRSSDTFEVVMQSVKEL 120
BLAST of NO24G00850 vs. NCBI_GenBank
Match: XP_002899495.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61855.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 100.1 bits (248), Expect = 4.700e-18 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 0 Query: 8 ETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLT---QPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 + K+ING+PTD+ + ++DRVF+ ++Q FGTL+ A DS++ QP D+++ LGRRDDPLLL+YARQ +E P+L +I L++R GTFE VM+ V+ L Sbjct: 15 DRKDINGVPTDIAVSIFADRVFIAVTQLGTFGTLVEAYQKDSISGKFQP------DIHIRLGRRDDPLLLVYARQFLEHFGIPVGLPILAAIGLKDRSSGTFEAVMQSVKEL 120
BLAST of NO24G00850 vs. NCBI_GenBank
Match: OWZ02976.1 (hypothetical protein PHMEG_00025369 [Phytophthora megakarya]) HSP 1 Score: 98.6 bits (244), Expect = 1.400e-17 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 0 Query: 8 ETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLT---QPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 + KEING+PTD+ + ++DRVF+ ++Q FGTL+ A DS++ QP D++V LGRRDDPLLL+YARQ +E P+L +I L++R TFE VM+ V+ L Sbjct: 16 DRKEINGVPTDIAVSIFADRVFIAVTQLGTFGTLVEACQKDSISGKLQP------DIHVRLGRRDDPLLLVYARQFLEHFGVPLGLPILAAIGLKDRSSDTFEVVMQSVKEL 121
BLAST of NO24G00850 vs. NCBI_GenBank
Match: ETI51540.1 (hypothetical protein F443_05131 [Phytophthora parasitica P1569] >ETK91439.1 hypothetical protein L915_04993 [Phytophthora parasitica] >ETL44849.1 hypothetical protein L916_04941 [Phytophthora parasitica] >ETP21328.1 hypothetical protein F441_05131 [Phytophthora parasitica CJ01A1] >ETP49254.1 hypothetical protein F442_05189 [Phytophthora parasitica P10297] >KUF87750.1 Proteasome assembly chaperone 3 [Phytophthora nicotianae]) HSP 1 Score: 97.4 bits (241), Expect = 3.100e-17 Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 0 Query: 8 ETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLT---QPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 + K+ING+ TD+ + ++DRVF+ ++Q FGTL+ A DS++ QP D++V LGRRDDPLLL+YARQ +E P+L +I L++R GTFE VM+ V+ L Sbjct: 15 DRKDINGVSTDIAVSIFADRVFIAVTQLGTFGTLVEAHQKDSISGKFQP------DIHVRLGRRDDPLLLVYARQFLEHFGIPVGLPILAAIGLKDRSSGTFEVVMQSVKEL 120
BLAST of NO24G00850 vs. NCBI_GenBank
Match: XP_008902512.1 (hypothetical protein PPTG_09334 [Phytophthora parasitica INRA-310] >ETL98004.1 hypothetical protein L917_04840 [Phytophthora parasitica] >ETM51165.1 hypothetical protein L914_04948 [Phytophthora parasitica] >ETN12554.1 hypothetical protein PPTG_09334 [Phytophthora parasitica INRA-310] >ETO80301.1 hypothetical protein F444_05168 [Phytophthora parasitica P1976]) HSP 1 Score: 96.3 bits (238), Expect = 6.800e-17 Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = 0 Query: 8 ETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLT---QPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 + K+ING+ TD+ + + DRVF+ ++Q FGTL+ A DS++ QP D++V LGRRDDPLLL+YARQ +E P+L +I L++R GTFE VM+ V+ L Sbjct: 15 DRKDINGVSTDIAVSIFVDRVFIAVTQLGTFGTLVEAHQKDSISGKFQP------DIHVRLGRRDDPLLLVYARQFLEHFGIPVGLPILAAIGLKDRSSGTFEVVMQSVKEL 120
BLAST of NO24G00850 vs. NCBI_GenBank
Match: XP_024577762.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG41393.1 Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 94.0 bits (232), Expect = 3.400e-16 Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0 Query: 10 KEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLTQPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 K ING+PTD + ++DRVF+ ++Q FGTL+ A D+++ G S D++V LGRRDDPLLL+YARQL+E P+L++I L++R TFE VM+ V+ L Sbjct: 17 KIINGLPTDFAVSIFADRVFIAVTQLGTFGTLLEAYQKDTIS--GKLQS-DIHVRLGRRDDPLLLVYARQLLEHFGVPVGLPVLVAIGLKDRSSQTFEVVMKCVKEL 120
BLAST of NO24G00850 vs. NCBI_GenBank
Match: CCA19592.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 89.4 bits (220), Expect = 8.300e-15 Identity = 44/112 (39.29%), Postives = 75/112 (66.96%), Query Frame = 0 Query: 6 YNETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLTQPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPLL 118 ++ +EING T+++I +S+++F+++SQ FGT++ A+ DSL++ + +V + LGRRDDPLLL+YARQ +E I P++ +I L++R TFE+VM + L+ Sbjct: 19 FSAYEEINGHATNLSISIFSNQLFIIVSQIDTFGTVVQARKRDSLSENFQS---EVQIRLGRRDDPLLLVYARQFLERIGSPLGLPIVAAIGLKDRSSDTFERVMNQLLALI 127
BLAST of NO24G00850 vs. NCBI_GenBank
Match: KYR01656.1 (proteasome assembly chaperone 3 [Tieghemostelium lacteum]) HSP 1 Score: 87.8 bits (216), Expect = 2.400e-14 Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 0 Query: 7 NETKEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLTQPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVME 112 N +K IN I TD+ I ++S+++F+ ISQN +F T I +S P + V LLG D LL+IYARQL+E I +SS++ LLLSIS++++ TF+ +M+ Sbjct: 34 NISKLINNIQTDIVISSFSNQIFITISQNQKFNTWIQGYKQESTFSD--EPCYTVETLLGNNQDQLLMIYARQLIENIGQSSNKTLLLSISIQDKSKDTFKIIMQ 136
BLAST of NO24G00850 vs. NCBI_GenBank
Match: GAY02598.1 (Hypothetical protein PINS_010430 [Pythium insidiosum]) HSP 1 Score: 87.4 bits (215), Expect = 3.200e-14 Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 10 KEINGIPTDVTIINYSDRVFLVISQNSRFGTLISAKADDSLTQPGAAPSFDVNVLLGRRDDPLLLIYARQLVEAISKSSSRPLLLSISLRERDPGTFEKVMEWVRPL 117 + ING+ T+ + + DR+F+V++Q FGTLI A+ DS++ A +++V LGRRDDPLLL+Y RQL+E P++ ++ L++R TFE VM+ V L Sbjct: 16 QSINGVDTEFVLTVFVDRIFIVVTQVGTFGTLIEARQKDSISGKFQA---EIHVRLGRRDDPLLLVYGRQLLEHFGVPLGLPVVAALGLKDRSTATFEVVMKQVEAL 119 The following BLAST results are available for this feature:
BLAST of NO24G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00850 ID=NO24G00850|Name=NO24G00850|organism=Nannochloropsis oceanica|type=gene|length=2521bpback to top protein sequence of NO24G00850.1 >NO24G00850.1-protein ID=NO24G00850.1-protein|Name=NO24G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=118bpback to top Synonyms
Publications
|