NO24G00800, NO24G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00800 vs. NCBI_GenBank
Match: EWM21113.1 (Thioredoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 454.5 bits (1168), Expect = 2.600e-124 Identity = 224/263 (85.17%), Postives = 234/263 (88.97%), Query Frame = 0 Query: 2 MAPVSARGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAHQNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAKIASS 265 MAPVS+RGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFI STTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHD+ F GF+AG +YVFANFYAPWCVWCQRL PTWEAFAE +E+QQF+IKVVKIDCVEHRDLCA+ VIRAFPTLRLYK GKAI+PDYREDRTVEALTSYIERTLDLHAK+ASS Sbjct: 1 MAPVSSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDXXXXXXXXXXXXXXXXXXXXXXFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASS 263
BLAST of NO24G00800 vs. NCBI_GenBank
Match: XP_005853522.1 (hypothetical protein NGA_0271420 [Nannochloropsis gaditana CCMP526] >EKU22839.1 hypothetical protein NGA_0271420 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.5 bits (859), Expect = 1.800e-88 Identity = 173/263 (65.78%), Postives = 183/263 (69.58%), Query Frame = 0 Query: 2 MAPVSARGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAHQNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAKIASS 265 MAPVS+RGIKSFDFYRK IRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHD+ F GF+AG +YVFANFYAPWCVWCQRL PTWEAFAE +E+QQF+IKVVKIDCVEHRDLCA+ VIRAFPTLRLYK GKAI+PDYREDRTVEALTSYIERTLDLHAK+ASS Sbjct: 1 MAPVSSRGIKSFDFYRK----------------------------------------------------IRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDXXXXXXXXXXXXXXXXXXXXXXFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASS 211
BLAST of NO24G00800 vs. NCBI_GenBank
Match: EWM21843.1 (Thioredoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 316.6 bits (810), Expect = 8.500e-83 Identity = 147/260 (56.54%), Postives = 195/260 (75.00%), Query Frame = 0 Query: 6 SARGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAHQNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAKIASSP 266 SARG+ D YR+VP DLTE + GGL SI+A +FM++LF+VEL SF++ T + VV+D + DQ I+INFN+TMLD+PC +A VDVLDVLGTN+ NV+KNIEKWNLD+ +RR FQGRNRE+R ++HDEHH AL++ QNGE+A+P+ + F ++ N++ F +FYAPWC+WCQRL PTWEAFAE +E+ Q +KV KIDCV H LC DQ + AFPTLR++ + + PDY DRT+ ALTS++ R L + K S P Sbjct: 7 SARGM---DLYRRVPADLTETSTLGGLFSIVAGVFMVALFIVELISFMSHRTETMVVLDHSHDQLIQINFNVTMLDLPCRYAVVDVLDVLGTNRMNVSKNIEKWNLDEAGRRRYFQGRNREERSILHDEHHGALEVLLQNGEHAVPLAADSFDEYLESNEFTFVSFYAPWCIWCQRLAPTWEAFAEHVEEAQIPVKVAKIDCVTHAQLCRDQKVHAFPTLRMFNRARPLPPDYNTDRTLVALTSFVTRKLAVEEKKKSWP 263
BLAST of NO24G00800 vs. NCBI_GenBank
Match: CBN74236.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 278.5 bits (711), Expect = 2.600e-71 Identity = 128/246 (52.03%), Postives = 179/246 (72.76%), Query Frame = 0 Query: 10 IKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAHQNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQ---QFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIE 253 IK+FDFYRK+PLDLTE T G ++S A+ ML LF+ EL +F+T ++TV +D N+D ++RINFNITML +PC++A+VDVLD+LGTN+ N+T+NI KW+ D+N +R F GRN+ Q + HD+HH LD+AH++GE+A+P+ +F FI GND V +F+APWCVWC +L PTWEAFAE +E+ + V K+DCVE R+LC+ Q + AFPT+R +KGG DY +DR+V +L Y + Sbjct: 4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDFFAPWCVWCIKLAPTWEAFAEEVERDASLNGKLMVAKVDCVEERELCSTQNLMAFPTIRYFKGGVQDGTDYSKDRSVTSLVQYAQ 249
BLAST of NO24G00800 vs. NCBI_GenBank
Match: GAX20665.1 (hypothetical protein FisN_32Hh054 [Fistulifera solaris]) HSP 1 Score: 273.5 bits (698), Expect = 8.200e-70 Identity = 131/254 (51.57%), Postives = 173/254 (68.11%), Query Frame = 0 Query: 8 RGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAH-QNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAK 261 + + S DFYR+VP DLTEAT G +S A++ M LF E +F T+ T +T+ VD N QIR+NFNITMLD+ C+F +VDV D LGTN+QNVTKN++KW LD+ +RR+F GRNRE R+L HDEH L+ H + G +AI + KE+F F+ N F + YAPWCVWCQRL PTWE A+ ++K + + V K+DC+ DLC +Q I AFPTLR Y G+ ++PDY+ DRTV AL Y +R LD+ K Sbjct: 12 QALSSVDFYRRVPKDLTEATTLGAFMSACAMIVMAVLFFSETLAFATTETVTTIAVDENTSPQIRLNFNITMLDLHCDFVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFIDLYAPWCVWCQRLAPTWETLAQEVKKLEMPVGVAKVDCMAEADLCREQKIMAFPTLRWYHDGEPVSPDYKMDRTVTALIGYAKRKLDMDEK 265
BLAST of NO24G00800 vs. NCBI_GenBank
Match: GAX12875.1 (hypothetical protein FisN_32Lh054 [Fistulifera solaris]) HSP 1 Score: 271.9 bits (694), Expect = 2.400e-69 Identity = 130/254 (51.18%), Postives = 173/254 (68.11%), Query Frame = 0 Query: 8 RGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAH-QNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAK 261 + + S DFYR+VP DLTEAT G +S A++ M LF E +F T+ T +T+ VD N QIR+NFNITMLD+ C++ +VDV D LGTN+QNVTKN++KW LD+ +RR+F GRNRE R+L HDEH L+ H + G +AI + KE+F F+ N F + YAPWCVWCQRL PTWE A+ ++K + + V K+DC+ DLC +Q I AFPTLR Y G+ ++PDY+ DRTV AL Y +R LD+ K Sbjct: 12 QALSSVDFYRRVPKDLTEATILGAFMSACAMIVMAVLFFSETLAFATTETVTTIAVDENTSPQIRLNFNITMLDLHCDYVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFIDLYAPWCVWCQRLAPTWETLAQEVKKLEMPVGVAKVDCMAEADLCREQKIMAFPTLRWYHDGEPVSPDYKMDRTVTALIGYAKRKLDMDEK 265
BLAST of NO24G00800 vs. NCBI_GenBank
Match: XP_002182871.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45607.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 261.9 bits (668), Expect = 2.500e-66 Identity = 124/252 (49.21%), Postives = 174/252 (69.05%), Query Frame = 0 Query: 10 IKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAH-QNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAK 261 + S DFYR+VP DLTEAT G ++S+ A++ M LF+ E ++F + +++ +D N QIR+NFNIT+ D+ C++ ++DV D LGTN+QNVTKNI+KW LD RR+F GRNRE R++VHD H +LD H ++G+ + + + F F+ ++ F + YAPWCVWCQRL PTWE FA+ ++K+ I V KIDC+ DLC Q + AFPTLR Y GKA+APDY+ DRT+ ALTS+ +R LD+ K Sbjct: 1 MSSVDFYRRVPKDLTEATSLGAIMSVCALVVMGVLFLSETAAFARTGIATSITLDENTSPQIRLNFNITLTDLQCDYVSIDVWDALGTNKQNVTKNIDKWQLDAQGIRRIFSGRNREGREVVHDSHDRSLDEIHSEDGKAVVDLTADTFDDFMEEHEMAFVDLYAPWCVWCQRLAPTWELFAQEVKKEGMPIGVAKIDCMAEADLCRAQRVMAFPTLRWYHEGKAVAPDYKMDRTIPALTSFAKRKLDMDEK 252
BLAST of NO24G00800 vs. NCBI_GenBank
Match: OEU22912.1 (DUF1692-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 259.2 bits (661), Expect = 1.600e-65 Identity = 119/252 (47.22%), Postives = 175/252 (69.44%), Query Frame = 0 Query: 10 IKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAH-QNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAK 261 + + DFYR+VP DLTEAT G +S++A+ M LF E +F + +++ +D N Q+R+NFNITMLD+ C++ +VDV D LGTN+QNVTKN+EKW L ++ R+F GRNREQR++ H+EH L+ H ++G A + K++F G++ ++ F + YAPWCVWCQRLGPTWE FA+ ++ + + V K+DC++ DLC D+ + AFPTLR Y GKA+AP+Y+ DRTV AL + +R L+++ K Sbjct: 1 MSNVDFYRRVPKDLTEATTLGAAMSLVALSIMGILFFSETMAFARTKIATSITLDENTQPQLRLNFNITMLDIHCDYVSVDVWDALGTNRQNVTKNVEKWQLSEDGNTRLFSGRNREQREVRHEEHDRTLEEMHEEDGVQAFELKKDNFKGWLEEHEMAFVDMYAPWCVWCQRLGPTWEKFAQEVKTLKMPVGVGKLDCMQEADLCRDEKVMAFPTLRWYDNGKAVAPEYKMDRTVTALVGFAKRKLEMNDK 252
BLAST of NO24G00800 vs. NCBI_GenBank
Match: EJK74922.1 (hypothetical protein THAOC_03372 [Thalassiosira oceanica]) HSP 1 Score: 253.4 bits (646), Expect = 8.800e-64 Identity = 119/241 (49.38%), Postives = 166/241 (68.88%), Query Frame = 0 Query: 20 PLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAHQNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAK 261 PL +AT G L+SI AI M LF+ E +F +T + + +D N QIR+NFNIT++D+ C++ +VDV D LGTN+QNVTKNIEKW LD++ QRR+F GRNR+QR++VH+EH L+ H++G A+ + + F F+ ++ F + YAPWC+WCQRL PTWE FAE + Q + V K++CV + LC D+ + AFPTLR YKGG+AI PDY+ DRTV AL+ Y +R L++ K Sbjct: 118 PLFTFQATSLGALMSICAISVMGILFLSETLAFARTTMRTAIALDENDQPQIRLNFNITLMDLHCDYVSVDVWDTLGTNRQNVTKNIEKWQLDESGQRRIFSGRNRDQREVVHEEHEETLEELHEDGAQAVELTPDSFKPFLMSHEMAFIDMYAPWCIWCQRLHPTWEKFAEEVYSQGMPVGVGKVNCVVYGQLCKDEKVMAFPTLRWYKGGEAILPDYKMDRTVAALSGYAKRKLEMEQK 358
BLAST of NO24G00800 vs. NCBI_GenBank
Match: XP_002295231.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87535.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 237.3 bits (604), Expect = 6.500e-59 Identity = 119/257 (46.30%), Postives = 153/257 (59.53%), Query Frame = 0 Query: 4 PVSARGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFITSTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDEHHPALDIAHQNGENAIPIGKEDFPGFIAGNDYVFANFYAPWCVWCQRLGPTWEAFAETMEKQQFDIKVVKIDCVEHRDLCADQVIRAFPTLRLYKGGKAIAPDYREDRTVEALTSYIERTLDLHAK 261 P + S DFYR+VP DLTEAT G ++SI AI M LF E +F + +++ +D N QIR+NFNIT++D+ C+F +VDV D LGTN+QNVTKNIEKW LD++ QRR+F GRNRE G+D F + YAPWC+WCQRL PTWE F E + + + V K+DCV H LC D+ + AFPTLR YK G+AI PDY+ DRTV+AL Y +R LD+ K Sbjct: 7 PGRRSAMSSVDFYRRVPKDLTEATSLGAIMSICAITVMAILFFSETLAFARTAMVTSIALDENDQPQIRLNFNITLMDLHCDFVSVDVWDTLGTNRQNVTKNIEKWQLDEDGQRRIFSGRNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHDMAFIDMYAPWCIWCQRLHPTWEKFGEKVHELGMPVGVGKVDCVVHAQLCKDEKVMAFPTLRWYKDGEAILPDYKMDRTVDALVGYAKRKLDMEQK 263 The following BLAST results are available for this feature:
BLAST of NO24G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00800 ID=NO24G00800|Name=NO24G00800|organism=Nannochloropsis oceanica|type=gene|length=1907bpback to top protein sequence of NO24G00800.1 >NO24G00800.1-protein ID=NO24G00800.1-protein|Name=NO24G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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