NO24G00750, NO24G00750 (gene) Nannochloropsis oceanica

Overview
NameNO24G00750
Unique NameNO24G00750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1660
Alignment locationchr24:221641..223300 -

Link to JBrowse

Properties
Property NameValue
DescriptionDehydrogenase reductase sdr family member 12
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:221641..223300 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO24G00750 vs. NCBI_GenBank
Match: EWM21111.1 (dehydrogenase reductase sdr family member 12 [Nannochloropsis gaditana])

HSP 1 Score: 449.5 bits (1155), Expect = 1.000e-122
Identity = 221/287 (77.00%), Postives = 248/287 (86.41%), Query Frame = 0
Query:   11 VLLVVTAFTSSAPTARAFRIDNMISKLIGKNLPDYTYSVPGMLFYFLDPSHTALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYK 298
            VLL++   TS  P   AFRID MISK IGK+LPDYTYSVPGMLFYFLDPSHT+LGFKA + CF+K+DL+V+L+GR +L+AGGNAGIGRSAAQSLAE GATVHI+CRSREKGE+AV DI++ TGN DV+LHVVDL S+ Q+Q FT  FAASGKPLHVL+NNAATMQS R +T EG E AQATNLLGFYGLTRGLLPVLK NAP+RI+NVVSAGMLASQFKLK L EEE I PYDGAAVYS HHRARVMLTE WA+E K   +VVN VHPGWVDTPLLR+AGPM+GFYK
Sbjct:    8 VLLLLAIITSFIPAVTAFRIDIMISKFIGKHLPDYTYSVPGMLFYFLDPSHTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGPMQGFYK 294          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_014017498.1 (PREDICTED: dehydrogenase/reductase SDR family member 12-like isoform X1 [Salmo salar])

HSP 1 Score: 234.6 bits (597), Expect = 5.200e-58
Identity = 118/274 (43.07%), Postives = 175/274 (63.87%), Query Frame = 0
Query:   62 TALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIFLTAKR 336
            T   F + A  F +KDLEV + GR  ++ G N+GIGR+ A ++A+RG TVH+VCR+++K E+A ADI   +GN ++Y+H++DL    +V  F + F    K L+VL+NNA  + S R V  EG+E + ATN++G Y LTRGL+P+L+++A  R++ V S GML  + +   L  E  I  YDG  VY+ H R +V++TE WA+    SN+  + +HPGWVDTP++  A  M  F++ M+ +LRT  QGADT+VWLA S+      +  F   +R
Sbjct:   23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFATNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAKTH--SNIHFSVMHPGWVDTPVVAVANAMPDFHQSMKDSLRTPEQGADTVVWLAISEAAATKPSGSFFQDRR 292          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_023822439.1 (dehydrogenase/reductase SDR family member 12 isoform X1 [Salvelinus alpinus])

HSP 1 Score: 233.0 bits (593), Expect = 1.500e-57
Identity = 117/274 (42.70%), Postives = 175/274 (63.87%), Query Frame = 0
Query:   62 TALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIFLTAKR 336
            T   F + A  F +KDLEV + GR  ++ G N+GIGR+ A ++A+RG TVH+VCR+++K E+A ADI   +GN ++Y+H++DL    +V  F + F    K L+VL+NNA  + S R V  EG+E + A+N++G Y LTRGL+P+L+++A  R++ V S GML  + +   L  E  I  YDG  VY+ H R +V++TE WA+    SN+  + +HPGWVDTP++  A  M  F++ M+ +LRT  QGADT+VWLA S+      +  F   +R
Sbjct:   23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFASNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAKTH--SNIHFSVMHPGWVDTPVVAVANAMPDFHQSMKDSLRTPEQGADTVVWLAISEAAATKPSGSFFQDRR 292          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_001233773.2 (PREDICTED: dehydrogenase/reductase SDR family member 12 [Gallus gallus])

HSP 1 Score: 229.9 bits (585), Expect = 1.300e-56
Identity = 117/270 (43.33%), Postives = 176/270 (65.19%), Query Frame = 0
Query:   61 HTALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIF 331
            +T  G+++ +  F+  DLEVD+ GRS L+ G N+GIG++AA+ +A RG TVH+VCR++E+ E A  +I T TGN +++LHVVD+ +  ++  F + F    K L+VL+NNA  M + R +T +G+E   ATN LG Y LT  LLP+L++ A AR+V V S GML  +  +  L  +   E +DG  VY+ + R +V+LTE WA+  +  +  V  +HPGW DTP +R++  M  FY+ M+ +LRTE QGADT+VWLA S +  +  + +F
Sbjct:   17 YTRSGYESASKHFDPADLEVDVAGRSFLITGSNSGIGKAAAKEIARRGGTVHLVCRNKERAEDAKGEIVTETGNQNIFLHVVDISNPKEIWKFAEKFKNEHK-LNVLINNAGCMVNNRELTEDGLEKNFATNTLGTYVLTTALLPLLEKEADARVVTVSSGGMLVQKLNISDL--QSGSETFDGTMVYAQNKRQQVVLTEQWAKTHRSIHFSV--MHPGWADTPAVRSS--MPDFYQKMKNSLRTEAQGADTVVWLAVSSEAAKLPSGLF 279          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_014017499.1 (PREDICTED: dehydrogenase/reductase SDR family member 12-like isoform X2 [Salmo salar] >ACI34199.1 Dehydrogenase/reductase SDR family member 12 [Salmo salar])

HSP 1 Score: 229.2 bits (583), Expect = 2.200e-56
Identity = 118/274 (43.07%), Postives = 174/274 (63.50%), Query Frame = 0
Query:   62 TALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIFLTAKR 336
            T   F + A  F +KDLEV + GR  ++ G N+GIGR+ A ++A+RG TVH+VCR+++K E+A ADI   +GN ++Y+H++DL    +V  F + F    K L+VL+NNA  + S R V  EG+E + ATN++G Y LTRGL+P+L+++A  R++ V S GML  + +   L  E  I  YDG  VY+ H R +V++TE WA+    SN+  + +HPGWVDTP +  A  M  F++ M+ +LRT  QGADT+VWLA S+      +  F   +R
Sbjct:   23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFATNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAKTH--SNIHFSVMHPGWVDTPAV--ANAMPDFHQSMKDSLRTPEQGADTVVWLAISEAAATKPSGSFFQDRR 290          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: ACN11029.1 (Dehydrogenase/reductase SDR family member 12 [Salmo salar])

HSP 1 Score: 229.2 bits (583), Expect = 2.200e-56
Identity = 118/274 (43.07%), Postives = 174/274 (63.50%), Query Frame = 0
Query:   62 TALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIFLTAKR 336
            T   F + A  F +KDLEV + GR  ++ G N+GIGR+ A ++A+RG TVH+VCR+++K E+A ADI   +GN ++Y+H++DL    +V  F + F    K L+VL+NNA  + S R V  EG+E + ATN++G Y LTRGL+P+L+++A  R++ V S GML  + +   L  E  I  YDG  VY+ H R +V++TE WA+    SN+  + +HPGWVDTP +  A  M  F++ M+ +LRT  QGADT+VWLA S+      +  F   +R
Sbjct:   18 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFATNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAKTH--SNIHFSVMHPGWVDTPAV--ANAMPDFHQSMKDSLRTPEQGADTVVWLAISEAAATKPSGSFFQDRR 285          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_021438604.1 (dehydrogenase/reductase SDR family member 12-like isoform X1 [Oncorhynchus mykiss])

HSP 1 Score: 229.2 bits (583), Expect = 2.200e-56
Identity = 115/274 (41.97%), Postives = 174/274 (63.50%), Query Frame = 0
Query:   62 TALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIFLTAKR 336
            T   F + A  F +KDLEV + GR  ++ G N+GIGR+ A ++A+RG TVH+VCR+++K E+A ADI   +GN ++Y+H++DL    +V  F + F    K L+VL+NNA  + S R V  EG+E + A+N++G Y LT+GL+P+L+++A  R++ V S GML  + +   L  E  I  YDG  VY+ H R +V++TE WA+    SN+  + +HPGWVDTP++  A  M  F++ M+ ++RT  QGADT VWLA S+      +  F   +R
Sbjct:   23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFASNVMGVYILTKGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAKTH--SNVHFSVMHPGWVDTPVVAVANAMPDFHQSMKDSMRTPEQGADTTVWLAISEAAATKPSGSFFQDRR 292          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_015707348.1 (PREDICTED: dehydrogenase/reductase SDR family member 12 isoform X1 [Coturnix japonica])

HSP 1 Score: 228.0 bits (580), Expect = 4.900e-56
Identity = 115/270 (42.59%), Postives = 176/270 (65.19%), Query Frame = 0
Query:   61 HTALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIF 331
            +T  G+++ +  F+  DLEVD+ GRS L+ G N+GIG++AA+ +A RG TVH+VCR++E+ E+A  +I T TGN +++LH+VD+ +  +V  F + F    K L+VL+NNA  M + R +T +G+E   ATN LG Y LT  LLP+L++ A AR+V V S GML  +  +  L     +  +DG  VY+ + R +V+LTE WA+  +  +  V  +HPGW DTP +R++  M  FY+ M+ +LRTE QGADT++WLA S +  +  + +F
Sbjct:   56 YTRSGYESASKSFDPADLEVDVAGRSFLITGSNSGIGKAAAKEIARRGGTVHLVCRNKERAEEAKGEIVTETGNQNIFLHIVDISNPKEVWKFAEKFKNEHK-LNVLINNAGCMVNNRELTEDGLEKNFATNTLGTYVLTTALLPLLEEEADARVVTVSSGGMLVQKLNISDLQSGSGV--FDGTMVYAQNKRQQVVLTEQWAKTHRSIHFSV--MHPGWADTPAVRSS--MPDFYQKMKNSLRTEAQGADTVLWLAVSSEAVKLPSGLF 318          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_015481872.1 (PREDICTED: dehydrogenase/reductase SDR family member 12 isoform X1 [Parus major])

HSP 1 Score: 227.6 bits (579), Expect = 6.400e-56
Identity = 114/270 (42.22%), Postives = 177/270 (65.56%), Query Frame = 0
Query:   61 HTALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIF 331
            +T  G+++ +  FN  D+EVD+ GRS LV G N+GIG++ A+ +A RG TVH+VCR++E+ E A  +I T TGN +++LH+VD+ +  ++  F + F    K L+VL+NNA  M ++R +T +G+E   ATN LG Y +T  L+P+L++ A AR++ V S GML  +  +  L  E    P+DG  VY+ + R +V+LTE WA+  +  N+  + +HPGW DTP +R++  M  FY+ M+ +LRTE QGADT++WLA S +  R  + +F
Sbjct:   17 YTRGGYESASKHFNPADVEVDVAGRSFLVTGANSGIGKATAKEIARRGGTVHLVCRNKERAEVAKEEIVTETGNQNIFLHIVDISNPKEIWKFAEKFQNEHK-LNVLINNAGCMVNSRELTEDGLEKNFATNTLGTYIMTTALVPLLEKAADARVITVSSGGMLVQKLNISDLQSEN--GPFDGTMVYAQNKRQQVVLTEQWAKAHR--NIHFSVMHPGWADTPAVRSS--MPDFYERMKNSLRTEAQGADTVLWLAVSAEAARLPSGLF 279          
BLAST of NO24G00750 vs. NCBI_GenBank
Match: XP_023822440.1 (dehydrogenase/reductase SDR family member 12 isoform X2 [Salvelinus alpinus])

HSP 1 Score: 227.6 bits (579), Expect = 6.400e-56
Identity = 117/274 (42.70%), Postives = 174/274 (63.50%), Query Frame = 0
Query:   62 TALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSAAQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQVQAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLTRGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSLHHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMRGALRTELQGADTIVWLAASQKGGRAQASIFLTAKR 336
            T   F + A  F +KDLEV + GR  ++ G N+GIGR+ A ++A+RG TVH+VCR+++K E+A ADI   +GN ++Y+H++DL    +V  F + F    K L+VL+NNA  + S R V  EG+E + A+N++G Y LTRGL+P+L+++A  R++ V S GML  + +   L  E  I  YDG  VY+ H R +V++TE WA+    SN+  + +HPGWVDTP +  A  M  F++ M+ +LRT  QGADT+VWLA S+      +  F   +R
Sbjct:   23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFASNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAKTH--SNIHFSVMHPGWVDTPAV--ANAMPDFHQSMKDSLRTPEQGADTVVWLAISEAAATKPSGSFFQDRR 290          
The following BLAST results are available for this feature:
BLAST of NO24G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21111.11.000e-12277.00dehydrogenase reductase sdr family member 12 [Nann... [more]
XP_014017498.15.200e-5843.07PREDICTED: dehydrogenase/reductase SDR family memb... [more]
XP_023822439.11.500e-5742.70dehydrogenase/reductase SDR family member 12 isofo... [more]
XP_001233773.21.300e-5643.33PREDICTED: dehydrogenase/reductase SDR family memb... [more]
XP_014017499.12.200e-5643.07PREDICTED: dehydrogenase/reductase SDR family memb... [more]
ACN11029.12.200e-5643.07Dehydrogenase/reductase SDR family member 12 [Salm... [more]
XP_021438604.12.200e-5641.97dehydrogenase/reductase SDR family member 12-like ... [more]
XP_015707348.14.900e-5642.59PREDICTED: dehydrogenase/reductase SDR family memb... [more]
XP_015481872.16.400e-5642.22PREDICTED: dehydrogenase/reductase SDR family memb... [more]
XP_023822440.16.400e-5642.70dehydrogenase/reductase SDR family member 12 isofo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL041nonsL041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004839NSK004839Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00750.1NO24G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598186gene_7307Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g39gene9316Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00750.1NO24G00750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00750 ID=NO24G00750|Name=NO24G00750|organism=Nannochloropsis oceanica|type=gene|length=1660bp
ATGCGCCTCTTCTCACTCTTCCTTCAGTTCGTCCTCCTAGTTGTGACCGC
CTTCACGTCCTCCGCTCCCACAGCCAGGGCCTTTCGGATCGATAACATGA
TCTCCAAGCTAATTGGCAAGAATTTGCCGGACTACACTTATTCGGTGCCA
Ggtaagtgtcttcttctacgtgtaccaacgacatgcaccgaatcacaagt
atccaagctcacacccgtaatgattatggggcctgaaaatctgctcctag
ttctgccgggtcggtcattttccattcgcagctgcttgatgctcacatcc
cttctcccccactctctccaacagGCATGCTTTTCTACTTCCTCGACCCC
TCGCACACGGCCCTGGGATTCAAGGCACACGCCGCCTGTTTTAACAAGAA
GGATCTCGAAGTTGATTTAAAGGGACGGTCCATCTTAGTGGCGGGCGGGA
ATGCGGGTATAGGCCGTAGTGCTGCACAAAGCTTAGCGGAACGAGGGGCC
ACGGTGCACATCGTGTGTCGTTCTCGAGAGAAGGGGGAACAAGCCGTGGC
GGACATCAAGACAGCGACGGGTAATGACGATGTATACCTACATGTGGTGG
ACCTGGGGTCGATGGGGCAGGTGCAGGCTTTCACTAAAACGTTTGCCGCG
AGTGGAAAGCCTCTTCACGTCCTGGTAAACAATGCTGCCACGATGCAAAG
CACCCGCACCGTCACCCCAGAGGGCATCGAGACGGCGCAAGCCACAAACC
TGCTGGGGTTTTACGGGCTTACCCGGGGCCTGCTCCCTGTGTTGAAACAG
AACGCGCCCGCGCGAATCGTCAACGTTGTATCTGCCGGAATGCTTGCTTC
TCAATTCAAGgtacgtaaccgtgttcagccccaccctcgtctctttcgca
ggcacgcatgcggccacatatcttcactcctcccttcctccttccctccc
tctctcccttctagTTAAAAGGTCTGACCGAAGAGGAAAAAATTGAGCCA
TACGACGGGGCGGCTGTCTATTCCCTGCATCATCGAGCACGGGTCATGCT
GACTGAGACATGGGCGGAGGAGTCCAAGGGAAGCAATTTGGTGGTTAACT
GTGTTCATCCCGGGTGGGTGGATACGCCGCTGTTGCGGACGGCAGGGCCC
ATGGAAGGGTTCTACAAgtacgttcttgggaaaagagagggagagaggga
ggaaaggacgaagataggaaaggtgacggacataaccatattagtagatg
taccatagaagaaagtgaaagagaacgggaagaagaaagtgaagggggct
tcatgcggtgacgacgtatcgtcccatagaggatggtccaaaaactcacc
actcggaatccctctttctctccccccttcatttccccttttctcatcca
gGCTAATGCGAGGTGCCCTTCGCACGGAACTCCAAGGGGCAGACACAATC
GTCTGGCTGGCCGCGTCCCAGAAGGGGGGGAGAGCACAGGCAAGTATTTT
TTTGACCGCAAAGCGAGGTGGAAAAATCTATTGTTCGCCAACACCAAGCC
GGAAAAGAAAGACTATGAGGATCTGGTTGCGTTTTGTGAGGGGAAGTGTC
CGGTGTGGGAGGGAGGGAAGTGAGAGTGGAAGTATAAGGAGTGAGGGTAG
ACGGGTGTAA
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protein sequence of NO24G00750.1

>NO24G00750.1-protein ID=NO24G00750.1-protein|Name=NO24G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=383bp
MRLFSLFLQFVLLVVTAFTSSAPTARAFRIDNMISKLIGKNLPDYTYSVP
GMLFYFLDPSHTALGFKAHAACFNKKDLEVDLKGRSILVAGGNAGIGRSA
AQSLAERGATVHIVCRSREKGEQAVADIKTATGNDDVYLHVVDLGSMGQV
QAFTKTFAASGKPLHVLVNNAATMQSTRTVTPEGIETAQATNLLGFYGLT
RGLLPVLKQNAPARIVNVVSAGMLASQFKLKGLTEEEKIEPYDGAAVYSL
HHRARVMLTETWAEESKGSNLVVNCVHPGWVDTPLLRTAGPMEGFYKLMR
GALRTELQGADTIVWLAASQKGGRAQASIFLTAKRGGKIYCSPTPSRKRK
TMRIWLRFVRGSVRCGREGSESGSIRSEGRRV*
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Synonyms
Publications