NO24G00730, NO24G00730 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G00730
Unique Name	NO24G00730
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4145
Alignment location	chr24:217348..221492 +

Link to JBrowse

Properties


Property Name	Value
Description	Ap-3 complex subunit sigma-2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:217348..221492 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030123	AP-3 adaptor complex
GO:0016020	membrane
GO:0005737	cytoplasm

Vocabulary: **Molecular Function**
Term	Definition
GO:0008565	protein transporter activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom
IPR016635	AP_complex_ssu
IPR027155	APS3
IPR022775	AP_mu_sigma_su

Homology

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: EWM21122.1 (ap-3 complex subunit sigma-2 [Nannochloropsis gaditana])

HSP 1 Score: 334.0 bits (855), Expect = 3.000e-88
Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTLTPGSKARTPTIGPPSLGRIMP 178
            MIRGVIIVNNHGRPRLVKLYQSV+GEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKT T  +K RTPTIGP S GR +P
Sbjct:    1 MIRGVIIVNNHGRPRLVKLYQSVIGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTSTSSTKVRTPTIGPASSGRGVP 177

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: CBJ48477.1 (Clathrin assembly complex, small subunit [Ectocarpus siliculosus])

HSP 1 Score: 278.1 bits (710), Expect = 1.900e-71
Identity = 137/160 (85.62%), Postives = 145/160 (90.62%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTLTPGS 161
            MIRGVIIVNNHG+PRLVK YQ+VVGEEAQ+SVI+++FQQVAQRPDSFCNYL+G IPEWGEG KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIM GMVLETNI  IL  INDQNRLHA S K   P S
Sbjct:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILLAINDQNRLHAASNKVGLPPS 160

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: XP_002295900.1 (sigma subunit of clathrin adaptor protein AP3 [Thalassiosira pseudonana CCMP1335] >ACI64617.1 sigma subunit of clathrin adaptor protein AP3 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 259.6 bits (662), Expect = 7.100e-66
Identity = 124/154 (80.52%), Postives = 139/154 (90.26%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQK 155
            MI+G+IIVNN G+PRLVK YQ+V GE+ QQSVIR+VFQQV+ RPDSFCNYL+GS+PEWGE +KLIYRHYATLYFVFAVD QESDLGILDLIQVFVEALDK FENVCELDLIFHSD+VHY+LDEI+M GMVLETNI  ILQ INDQ R+H +S K
Sbjct:    1 MIKGIIIVNNSGKPRLVKFYQNVFGEQRQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGENIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQERMHNESMK 154

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: EJK49173.1 (hypothetical protein THAOC_31981 [Thalassiosira oceanica])

HSP 1 Score: 257.3 bits (656), Expect = 3.500e-65
Identity = 126/158 (79.75%), Postives = 139/158 (87.97%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTLTP 159
            MI+G+IIVNN G+PRLVK YQ+V GEE QQSVIR+VFQQV+ RPDSFCNYL+GS+PEWGE  KLIYRHYATLYFVFAVD QESDLGILDLIQVFVEALDK FENVCELDLIFHSDKVH++LDEI+M GMVLETNI  ILQ I+DQ R+H  S KT  P
Sbjct:    1 MIKGIIIVNNSGKPRLVKFYQNVFGEEKQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGEKCKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDKVHHILDEIVMGGMVLETNINAILQAISDQERMHKDSMKTKGP 158

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: EJK62770.1 (hypothetical protein THAOC_16604 [Thalassiosira oceanica])

HSP 1 Score: 257.3 bits (656), Expect = 3.500e-65
Identity = 126/158 (79.75%), Postives = 139/158 (87.97%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTLTP 159
            MI+G+IIVNN G+PRLVK YQ+V GEE QQSVIR+VFQQV+ RPDSFCNYL+GS+PEWGE  KLIYRHYATLYFVFAVD QESDLGILDLIQVFVEALDK FENVCELDLIFHSDKVH++LDEI+M GMVLETNI  ILQ I+DQ R+H  S KT  P
Sbjct:  174 MIKGIIIVNNSGKPRLVKFYQNVFGEEKQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGEKCKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDKVHHILDEIVMGGMVLETNINAILQAISDQERMHKDSMKTKGP 331

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: GAX17108.1 (AP-3 complex subunit sigma [Fistulifera solaris])

HSP 1 Score: 255.0 bits (650), Expect = 1.800e-64
Identity = 120/152 (78.95%), Postives = 137/152 (90.13%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQS 153
            MI+G+IIVNNHG+PRLVK YQSV  E  QQSVIR+VFQQVA RPDSFCNYL+G+IPEWG+ +KLIYRHYATL+FVFAVD QESDLGILDLIQVFVE+LD+CFE+VCELDLIFHSD+VHYVLDEI+M GMVLETNI  +LQ + DQ+RLH  S
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQSVESESLQQSVIRRVFQQVAARPDSFCNYLEGAIPEWGDNIKLIYRHYATLFFVFAVDSQESDLGILDLIQVFVESLDRCFESVCELDLIFHSDRVHYVLDEIVMGGMVLETNIHSVLQAVKDQDRLHKDS 152

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: XP_002182207.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46108.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 253.8 bits (647), Expect = 3.900e-64
Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLH 150
            MI+G+IIVNNHG+PRLVK YQ+V  E  QQSVIR+VFQQVA RPDSFCNYL+G +PEWG+ +KLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSD+VHY+LDEI+M GMVLETNI  +LQ I DQ ++H
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQNVESEALQQSVIRRVFQQVAARPDSFCNYLEGIVPEWGDHIKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYILDEIVMGGMVLETNIQGVLQSIKDQGKIH 149

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: GAX25395.1 (AP-3 complex subunit sigma [Fistulifera solaris])

HSP 1 Score: 253.8 bits (647), Expect = 3.900e-64
Identity = 119/152 (78.29%), Postives = 137/152 (90.13%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQS 153
            MI+G+IIVNNHG+PRLVK YQSV  E  QQ+VIR+VFQQVA RPDSFCNYL+G+IPEWG+ +KLIYRHYATL+FVFAVD QESDLGILDLIQVFVE+LD+CFE+VCELDLIFHSD+VHYVLDEI+M GMVLETNI  +LQ + DQ+RLH  S
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQSVESESLQQNVIRRVFQQVAARPDSFCNYLEGAIPEWGDNIKLIYRHYATLFFVFAVDSQESDLGILDLIQVFVESLDRCFESVCELDLIFHSDRVHYVLDEIVMGGMVLETNIHSVLQAVKDQDRLHKDS 152

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: XP_009034632.1 (hypothetical protein AURANDRAFT_21819 [Aureococcus anophagefferens] >EGB11079.1 hypothetical protein AURANDRAFT_21819 [Aureococcus anophagefferens])

HSP 1 Score: 251.9 bits (642), Expect = 1.500e-63
Identity = 124/161 (77.02%), Postives = 140/161 (86.96%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSV-----VGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTL 157
            MI+G+IIVNN+G+ R+ K +QSV       E+AQQ V+RKVFQQVAQRPDSFCNYL+GSIPEWG   KLIYRHYATLYFVFAVD+ ESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHY+LDEI+MAGMVLETNI+ ILQ +NDQN+LH +S   L
Sbjct:    1 MIKGIIIVNNNGQARICKFFQSVHEEGYSAEDAQQQVVRKVFQQVAQRPDSFCNYLEGSIPEWGATTKLIYRHYATLYFVFAVDELESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYILDEIVMAGMVLETNIVSILQGVNDQNKLHQKSLSKL 161

[Close]

BLAST of NO24G00730 vs. NCBI_GenBank
Match: OEU09940.1 (sigma subunit of clathrin adaptor protein AP3 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 248.8 bits (634), Expect = 1.300e-62
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 0

Query:    1 MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQS 153
            MI+G+IIVNNHG+PRLVK YQSV  E+ QQSVIRK+F QV  RPDSFCNYL+G +PEWGE VKLIYRHYATL+F+FAVD QESDLGILDLIQVFVEALDKCFENVCELDLIFHSD+VHYVLDEI+M GMVLETNI  ILQ I DQ ++   S
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQSVDSEQQQQSVIRKMFTQVTTRPDSFCNYLEGVVPEWGENVKLIYRHYATLFFIFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNISIILQSIKDQGKMAVDS 152

The following BLAST results are available for this feature:

BLAST of NO24G00730 vs. NCBI_GenBank

BLAST of NO24G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM21122.1	3.000e-88	94.35	ap-3 complex subunit sigma-2 [Nannochloropsis gadi...	[more]
CBJ48477.1	1.900e-71	85.63	Clathrin assembly complex, small subunit [Ectocarp...	[more]
XP_002295900.1	7.100e-66	80.52	sigma subunit of clathrin adaptor protein AP3 [Tha...	[more]
EJK49173.1	3.500e-65	79.75	hypothetical protein THAOC_31981 [Thalassiosira oc...	[more]
EJK62770.1	3.500e-65	79.75	hypothetical protein THAOC_16604 [Thalassiosira oc...	[more]
GAX17108.1	1.800e-64	78.95	AP-3 complex subunit sigma [Fistulifera solaris]	[more]
XP_002182207.1	3.900e-64	80.54	predicted protein, partial [Phaeodactylum tricornu...	[more]
GAX25395.1	3.900e-64	78.29	AP-3 complex subunit sigma [Fistulifera solaris]	[more]
XP_009034632.1	1.500e-63	77.02	hypothetical protein AURANDRAFT_21819 [Aureococcus...	[more]
OEU09940.1	1.300e-62	78.95	sigma subunit of clathrin adaptor protein AP3 [Fra...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL041	nonsL041	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR030	ncniR030	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR082	ngnoR082	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004838	NSK004838	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO24G00730.1	NO24G00730.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO24G00730.2	NO24G00730.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|598182	gene_7306	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
APS2	gene9315	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO24G00730.1	NO24G00730.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO24G00730.2	NO24G00730.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO24G00730 ID=NO24G00730|Name=NO24G00730|organism=Nannochloropsis oceanica|type=gene|length=4145bp
CCGTTTAACTGCATACTGTCTTTTTTCTTCCTATGTCTTCACACGATTGC
ACCCAGACTTCATCTTATAAACAGTTTCTTTTCAATACTTCATCTGACAG
CAGCGTAGCAACCACATCAAATCGGCATGTCCCACGTCTCAGGCCGAGTC
CAAAACGCATCATCCCTTGTTCCTCCATAGTAAGCAACCAACACCTTATC
CATCACTTCACTCGTTCGCAACGCCGACGCCCCTGTGCTCCGACACTGCC
ACTCAATCTCCTCCTTCTCCTCCTTCTCCTCCTCATCCCCATTTTTGTCC
TTGATAATGCTAACGTCACATTTCGTCTTCGCTGTTGCTGCTGCTTTCTT
TGCCTCCTTCCACCTCCGCACATCATCCGTCACGGCGGCAATCAGCGGCA
AATGCACATGCGGCGATGCTTTCACATCGAATCCTCCAATTGTTTCCACC
ACCATACCTTTCTCCGCATCATCCTTGCCCTCCTTCCGGGTCGTCAAAAC
GATCGGCCCATTGTTAAAAACTGAAAATTTGACATGGCCTTTCTCACCAA
CAATAACGAAAGAGTCCTCTTCGATAGACGAAGCAAAATTCCACGAGCCC
ATCCCCAAAGCCCCTTCTTTTGTTCGGAATACCATGCGGACTTGGTCTTC
CACGTCAGCCGCCGTTCGATTTTTCGGAGTGGAGGATGAGGAAAAGGAAG
ATGATGAAGAAGTACTGTGACCATTACTTCTGCTGCTACTGATGCTGTTC
CTGCTGATGCTACTACAGCTTCTCGTACATCCTGCCATACCTTTCACACT
CTCCAACGGCACCGGCCCAAACAACCAATCGACGAGATCAAGCATATGAC
TCCCCAAGTCCAGAAACAAGCCTCCCCCCGCTACTGCAGCATCCACCCTC
CACTCCTCCTTACGTCCCTCCCCTCTCTCCTTGGGCATCGGCCGCAAGCG
GGAGCAGAAAAGCCTCACCTCCGTAATCTTTCCCAATTTACCCTCTTTCA
AAATCGTATGCACAGCCTCAAACTTAGGTAAATGCCGTCGATAATACGCA
ACAAATAAAGGCAAACTCACCCGATTGAATCCTCGTATCATCTCCCTACA
TTCCACCGCACACCTTGCCATGGGTTTTTCAACTAAAGTAGGTTTACCCA
TCGTAGCACATAGCAATGCAAGCTCTTTGTGGTTGCCTGGAGGAGTAGCG
ATATAAACAGCATCGACTTGCTCGCAGTCAAGCAACTGCTGAGGGTCCGA
AAAAAACAAAGGGACATGATGACGTTGTGCAAAAGACTTGGCTAAGTCAC
CGTTACGGCGCATGACAGCCTTAAGGCAACTGTTTGGGACCTTGTTAAAT
GCGGGCCCCGACTTGACTTCGACGACGTCCCCGCAGCCGATAATGCCCCA
GCGCACGGTGGTAGTGGGGGCAGAGGTGGTGGAGGGTAACATAGCTGTGT
TGCGAAGAGATATAGGGAGAGGGAAATGATTTACATCCGCCAGGGATCGA
TAACAAATTTGTAGCTTCGGTCGAGGACCACAAAAAAGACAGACGCCGCA
ATCGAGGGGCAGGAGGTCGAGCATACCGTCCTGGCAAATGCAAGTGGCTT
CAAAATGAAGCACACCATGGTCTGATTTACGACGAGATGTGTGGATTCTT
CGCTACTGGCTCCGGGTGAAGGTCTGTGCACGTGTGTGTGTGTGTTGTGG
TGGTGTTCTGGAGTCTCTGTCTCACGATCAATGAGATTGTTATTGGTGTT
GGTGCCTTTTTGTCAGCCTGAAGCGATTCCCTTGACTTGCTTCTTCACTC
ACAAGAATTGTGCCCTCCCGTAAGGCTATCCACAGGCTTCACCTTTTTTC
TCTCTTCCCTCTCACATGCACATCACACATAGAGGCTCTCAAGCCCGTCC
AACCGCTCGGGATCCCTAACCGAGGCGCTATGATTCGAGgtaagggagag
gatgaagactaggagggcgtctcgacggatgatcatgatgcttggtgttt
ccgcgtggcggcaaatgaatgacatttgtgcgggctcgcagcccaacttc
agagggcttagatgtaagggcagcttggtgctctttggaaggatccagcc
gcccaggacccggcttgatggtgtggaacccccccctcaccgttccccac
caccttgtcgagagcttcagttagcgtacacaaccgccgcctttgcacca
accgtaatcacaattttaatacgtaacagGCGTCATCATCGTCAACAATC
ATGGGCGGCCACGGCTCGTCAAGTTGTATCAGAGCGTGgtaagtaatgtt
tgtttcccaccatgtttgcccgctgccagccccctccgcgcagcctcttt
tcgtcgtcctgtgtcccctgcccatctcccacgtgtcccgtgcccagtct
gtctttgatgcaattgttttttgtccgctggacatgtctcgatatacttt
tctggtgatctcgattttcgcccgtaaccccgctctctctttcctttgtc
ctctttctccctcgttttcatgtcaacagGTCGGCGAAGAAGCTCAACAA
AGCGTCATCCGCAAGGTCTTCCAACAAGTAGCGCAAAGGCCCGACTCATT
TTGTAACTACCTCGATGGGAGCATCCCTGAATGGGGGGAAGGAGTGAAGT
TGATCTATCGGCACTATGCGACCCTTTACTTTGTTTTTGCCGTGGACCAG
CAGGAGAGTGACCTGGGCATTTTGGATCTGATACAAGgtagggaaaaaag
caggagtaaggggtagactgagaaaagggacgatgtattaaaaatttgtg
gattttagacgcggattttggaaaggttggcattcctcactatctagtct
gagaaaaagaggaggacaacaacaagaatggattctcatcttctgtaact
ctcttttctctccttaacctccgcactcgcagTCTTCGTAGAGGCCTTGG
ACAAGTGCTTCGAAAATGTCTGCGAGCTTGATCTCATCTTTCACAGCGAC
AAGgtgcgtgtgaatgagaaggttgagaaggggacagaaagcgagaagca
tgcccttttctcgagggaagaataacccaataaagcacgcatacgacact
ggaaacgacctctgtatctcttttcacgtctttcctttcttctctcgctc
ccttcctcccctcatctcaagGTGCACTACGTTCTAGACGAGATCATCAT
GGCCGGCATGGTCCTCGAGACCAACATCATCCACATCCTCCAAGTCATCA
ACGATCAAAACCGCCTGCACGCTCAGAGTCAAAAGACGCTCACGCCTGGG
AGCAAGGCACGGACGCCCACGATTGGCCCGCCGTCTCTGGGGAGGATTAT
GCCTCTGAGATAGATCTGTAGGTGATACGGATGTACATAGACAAAGGGAA
ACATGAAGGAGGGTACGGATGCCGGGAGAAGCTTGAAATGAATTAAAATG
CTTAATTCAAGATCTAGAGCTACTACAAATGCATTTACGTTGCCATGATT
TACCTTGGGTTGCCATAATGTTGATTTGACGGACATTATTTCGCAGCGAC
TGGCGCGGTAACTGGAGGTACCTTCTTGCCCTGACTGCCGAAGGTGTGGG
GAGGCCCTCCTCAGTTTCCAATTACTCAATTGTTTTTCAAATTGTGCGCA
CGTCTTGGTGAGACAAACGGCATAGCTGCCACAAAGCATTTTTTGAGAAC
CTTTGAAGAACATTTTAATGGTTGTACGTTTAATCAAAAGTTGAGCGCTG
AATGAGTAGTAGCTGGCTATGTTATTCCCATCTTGGGTGCATTGTGTGCA
CAAGATTTGGGTGCTTCCTTTCCTTCCTTTTTGGCATGAAATCACTCAAA
GAGGTGCAAAAAAGTTGAGAGAGGGAGAGGGTGGAGGTCCGATGTATGTC
TAGTACGCAATCCAAGTTTATGCCGAGAAGCGGGCAATCAATAACCCTTC
CACACCCCGACAGAAAGGTGCATATGCTATTGTATCAAACGACAAACATG
TCATGGAGCTAGACCGGAAGTGATGCATGGAGTGAGTCGGCATTTTCGGC
ATGTGGGTTATCTTTGGTCAAGAGAATAGCGCGGAGAAACTTTTCACATA
AATATCCACTATTGAAATAAAACAAATGACCCAAAAAACATATCC

protein sequence of NO24G00730.1

>NO24G00730.1-protein ID=NO24G00730.1-protein|Name=NO24G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bp
MIRGVIIVNNHGRPRLVKLYQSVVGEEAQQSVIRKVFQQVAQRPDSFCNY
LDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDK
CFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHA
QSQKTLTPGSKARTPTIGPPSLGRIMPLR*

protein sequence of NO24G00730.2

>NO24G00730.2-protein ID=NO24G00730.2-protein|Name=NO24G00730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MFVSHHVCPLPAPSAQPLFVVLCPLPISHVSRAQSVFDAIVFCPLDMSRY
TFLVISIFARNPALSFLCPLSPSFSCQQVGEEAQQSVIRKVFQQVAQRPD
SFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFV
EALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQ
NRLHAQSQKTLTPGSKARTPTIGPPSLGRIMPLR*

Synonyms

Publications