NO24G00690, NO24G00690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00690 vs. NCBI_GenBank
Match: EWM21107.1 (Protein of unknown function DUF652 [Nannochloropsis gaditana]) HSP 1 Score: 250.8 bits (639), Expect = 5.800e-63 Identity = 128/197 (64.97%), Postives = 157/197 (79.70%), Query Frame = 0 Query: 9 VRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVCCIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIRMKDKDAAS 206 +RKWLRFYRIVYG+ PPY IL+DGNFI+MALKVKIDI+DRLKKMLL E+ C P+AVLDELAA+GP F A EW ++CC+++ NP N DD ++ +SAG AI T++GE+N DKYMVATQDQ+L+++LRHVPSV LLFVSRAV LMEAPS +S+ SAKQEGEKFRLL+EEER LLA++R K+K S Sbjct: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDD------SGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLS 191
BLAST of NO24G00690 vs. NCBI_GenBank
Match: XP_005856221.1 (rrna-processing utp23-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20138.1 rrna-processing utp23-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 214.5 bits (545), Expect = 4.600e-52 Identity = 113/178 (63.48%), Postives = 140/178 (78.65%), Query Frame = 0 Query: 28 ILIDGNFIYMALKVKIDIKDRLKKMLLGESFVCCIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIRMKDKDAAS 206 IL+DGNFI+MALKVKIDI+DRLKKMLL E+ C P+AVLDELAA+GP F A EW ++CC+++ NP N DD ++ +SAG AI T++GE+N DKYMVATQDQ+L+++LRHVPSV LLFVSRAV LMEAPS +S+ SAKQEGEKFRLL+EEER LLA++R K+K S Sbjct: 1 ILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDD------SGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSISSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLS 172
BLAST of NO24G00690 vs. NCBI_GenBank
Match: OWZ13187.1 (RRNA-processing protein [Phytophthora megakarya]) HSP 1 Score: 115.9 bits (289), Expect = 2.200e-22 Identity = 69/204 (33.82%), Postives = 114/204 (55.88%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIRMKDKD 203 MR RAK +RK LR + + G+ PPY +L+DGNFI M +++K+D+ +R+ K L + C +P+A L+EL LG A A E A++ + N+ + + M + I+T+IG++N K++V TQ+ +LR LR VP V LL+++R+VL+ E S A+ A+ ++E L E+ L ++ + D Sbjct: 1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCMQMKVDVHERVPKYLQVKPHECEFYVPRAALEELKMLGEAMKEAYELAKSF-------------KVAETHNQPKNEAMDVSKCIQTIIGDKNDGKFVVCTQEVELRKALRQVPGVPLLYLNRSVLVFEEISRATLAIVRQEEKANMAKLDVNEKRKLDQMQEDNDD 191
BLAST of NO24G00690 vs. NCBI_GenBank
Match: XP_002900895.1 (rRNA-processing protein, putative [Phytophthora infestans T30-4] >EEY59702.1 rRNA-processing protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 113.6 bits (283), Expect = 1.100e-21 Identity = 69/192 (35.94%), Postives = 111/192 (57.81%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEER 191 MR RAK +RK LR + + G+ PPY +L+DGNFI M L++K+D+ +R+ K L + C +P+A LDEL LG A A + A++ N + D +++T+ + I+ +IGE+N+ K++V TQ+ +LR LR VP V LL+++R+VL+ E S A+ A+ ++E L E+ Sbjct: 1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCLQMKVDVHERVPKYLQVKPHECEFYVPRAALDELKTLGEATKEAYDLAKS-----FKVAEAYNQSEAD-----KQETVDVSKYIQNIIGEKNERKFVVCTQEVELRKALRLVPGVPLLYLNRSVLVFEEISRATLAIVRQEEKANMAKLDVNEK 182
BLAST of NO24G00690 vs. NCBI_GenBank
Match: XP_008896111.1 (hypothetical protein PPTG_04040 [Phytophthora parasitica INRA-310] >ETI36257.1 hypothetical protein F443_17608 [Phytophthora parasitica P1569] >ETK76449.1 hypothetical protein L915_17145 [Phytophthora parasitica] >ETL29889.1 hypothetical protein L916_17041 [Phytophthora parasitica] >ETL83117.1 hypothetical protein L917_16868 [Phytophthora parasitica] >ETM36324.1 hypothetical protein L914_16947 [Phytophthora parasitica] >ETM36346.1 hypothetical protein L914_16946 [Phytophthora parasitica] >ETN18436.1 hypothetical protein PPTG_04040 [Phytophthora parasitica INRA-310] >ETO64951.1 hypothetical protein F444_17649 [Phytophthora parasitica P1976] >ETP06051.1 hypothetical protein F441_17477 [Phytophthora parasitica CJ01A1] >ETP34160.1 hypothetical protein F442_17463 [Phytophthora parasitica P10297] >KUF97243.1 hypothetical protein AM588_10011331 [Phytophthora nicotianae]) HSP 1 Score: 113.2 bits (282), Expect = 1.400e-21 Identity = 67/199 (33.67%), Postives = 116/199 (58.29%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIR 198 MR RAK +RK LR + + G+ PPY +L+DGNFI M L++K+D+ +R+ K L + C +P+A LDEL LG A A + A++ + + +++++T+ + I+++IGE+N+ K++V TQ+ +LR LR VP V L++++R+VL+ E S A+ A+ ++E L E+ L ++ Sbjct: 1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCLQMKVDVHERVPKYLQVKPHECEFYVPRAALDELKTLGEATKEAYDLAKS----------FKVAEVYGQSEDEKQETVDVSKYIQSIIGEKNERKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRATLAIVRQEEKASMAKLDVNEKRKLEQMQ 189
BLAST of NO24G00690 vs. NCBI_GenBank
Match: CCI47340.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 112.1 bits (279), Expect = 3.200e-21 Identity = 70/199 (35.18%), Postives = 110/199 (55.28%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIR 198 MR RAK +RK LR + + G+ PPY +L+D NFI M K+++K+R+ K L + + C IP+ + EL +G + P LE A V+ + + DD +D E I +IG+ N KY+VATQ+ +LR QLR +P V L++++R+VL+ E S A+ A+ + E K L + E+L L ++ Sbjct: 1 MRYLRAKAIRKALRQFHFLCGIKPPYKVLLDTNFIAMCYHAKVELKERVAKFLQVKLYECEFFIPEKSIQELELIGESMKPVLE-AIKMFNVIDSKASEERDDTIDMAKE-----------ILAIIGDCNAGKYIVATQEVELRKQLRQIPGVPLIYLNRSVLVFEDISRATIAIVRQNEQSKLGRLDQAEKLTLKGVK 187
BLAST of NO24G00690 vs. NCBI_GenBank
Match: KUF72060.1 (rRNA-processing protein utp23 [Phytophthora nicotianae]) HSP 1 Score: 112.1 bits (279), Expect = 3.200e-21 Identity = 67/199 (33.67%), Postives = 115/199 (57.79%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIR 198 MR RAK +RK LR + + G+ PPY +L+DGNFI M L++K+D+ +R+ K L + C +P+A LDEL LG A A + A++ + +++++T+ + I+++IGE+N+ K++V TQ+ +LR LR VP V L++++R+VL+ E S A+ A+ ++E L E+ L ++ Sbjct: 1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCLQMKVDVHERVPKYLQVKPHECEFYVPRAALDELKTLGEATKEAYDLAKS----------FKVAGVYGQSEDEKQETVDVSKYIQSIIGEKNERKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRATLAIVRQEEKASMAKLDVNEKRKLEQMQ 189
BLAST of NO24G00690 vs. NCBI_GenBank
Match: XP_024584856.1 (Uncharacterized proteins of PilT N-term./Vapc superfamily [Plasmopara halstedii] >CEG48487.1 Uncharacterized proteins of PilT N-term./Vapc superfamily [Plasmopara halstedii]) HSP 1 Score: 110.2 bits (274), Expect = 1.200e-20 Identity = 72/212 (33.96%), Postives = 117/212 (55.19%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWART--CCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLLANIRMKDKDAASGER 209 MR RAK +RK LR + + G+ PPY +L+DGNFI M +++K+++ +R+ K L + C +P+AVLDEL LG A A A++ EV Q +DD ++ T+ + I+T+IG++N K+ V TQ+ +LR LR VP V L++++R+VL+ E S A+ A+ ++E L + L I+ + E+ Sbjct: 1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCIQMKVNVNERVSKYLQVKQHECEFYVPRAVLDELKTLGEATKEAYHLAKSFKVAEVF-----GQAEDD-------KQVTVDVSKYIQTIIGDKNDRKFFVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRATLAIVRQEEEANMAKLDINVKRKLEQIQENKHETGYAEQ 200
BLAST of NO24G00690 vs. NCBI_GenBank
Match: CCA21595.1 (rRNAprocessing protein putative [Albugo laibachii Nc14]) HSP 1 Score: 109.0 bits (271), Expect = 2.700e-20 Identity = 66/195 (33.85%), Postives = 109/195 (55.90%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVC--CIPKAVLDELAALGPAFHPALEWARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEERLLL 194 MR RAK +RK LR ++ + G+ PPY +L+D NFI M + K+++K+R+ K L + + C IP+ + EL +G + P LE + + +++ D++ + I +IGE N KY+VATQ+ +LR QLR +P V L++++R+VL+ E S A+ A+ ++E K L E E+ L Sbjct: 1 MRYLRAKAIRKALRQFQFLCGIKPPYKVLLDINFIAMCHQAKVELKERVAKFLQVKLYQCEFFIPEKSIQELKLIGDSMKPVLESIKMFSVI---------------ESKASEDSVDMTKEILAIIGECNAGKYIVATQEVELRKQLRQIPGVPLIYLNRSVLVFEDISRATVAIVRQKEQSKLAKLDEAEKQTL 180
BLAST of NO24G00690 vs. NCBI_GenBank
Match: XP_008880985.1 (hypothetical protein H310_14829 [Aphanomyces invadans] >ETV90375.1 hypothetical protein H310_14829 [Aphanomyces invadans]) HSP 1 Score: 108.6 bits (270), Expect = 3.600e-20 Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 0 Query: 1 MRVNRAKQVRKWLRFYRIVYGVAPPYMILIDGNFIYMALKVKIDIKDRLKKMLLGESFVCCIPKAVLDELAALGPAFHPALEW-ARTCCEVLCNPPPVQNDDDVDHDNEKQRDTMSAGEAIRTLIGEENKDKYMVATQDQDLRSQLRHVPSVGLLFVSRAVLLMEAPSNASKAVSAKQEGEKFRLLSEEER 191 MR RAK +RK LR ++ + G+ PPY +L+DGNFI M +K+ +DI RL L + + +AVLDEL L W A + EV+ P ND A ++ IG N K++VATQ+ +LRSQLR VP V L++++R+VL+ E S A+ +S K + K L+ E+ Sbjct: 1 MRYLRAKHIRKALRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPTFLQTNNCTYFVTRAVLDELKLLSDNADMRAAWEAASSFEVVEGDPDATND---------------ATNSMLAAIGSRNDRKFIVATQETELRSQLRRVPGVPLIYLNRSVLVFEDMSEATLRISRKDDHAKAAKLNAGEK 176 The following BLAST results are available for this feature:
BLAST of NO24G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00690 ID=NO24G00690|Name=NO24G00690|organism=Nannochloropsis oceanica|type=gene|length=1187bpback to top protein sequence of NO24G00690.1 >NO24G00690.1-protein ID=NO24G00690.1-protein|Name=NO24G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bpback to top Synonyms
Publications
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