NO24G00660, NO24G00660 (gene) Nannochloropsis oceanica

Overview
NameNO24G00660
Unique NameNO24G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2055
Alignment locationchr24:204336..206390 +

Link to JBrowse

Properties
Property NameValue
DescriptionAlcohol dehydrogenase GroES-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:204336..206390 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR011032GroES-like
IPR013149ADH_C
IPR013154ADH_GroES-like
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Homology
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: EWM21135.1 (Alcohol dehydrogenase GroES-like protein [Nannochloropsis gaditana])

HSP 1 Score: 634.8 bits (1636), Expect = 1.600e-178
Identity = 303/350 (86.57%), Postives = 324/350 (92.57%), Query Frame = 0 
Query:    1 MSSPHEGKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            MS   +GK IECKAAVAWE NKPLVTETIRVDPPK GEVRLKV+ANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVES+G GVTSV+PGMYVIPCYTPQC++A CI+CQSPKTNLCPKIR TQG+GVMPDGTSRFST+DG+ IYHFMGCSTFAEYTVVAEISCAVVS+KAPLDKVCLFGCGVSTGLGAVLKTCAVEEGA+VAVFGLGAVGLAVVQAAK+RKARRI A+D N KKFEMA QLGATDCLNP+   +KPIQ V+VE TTWGVDYSFDATGN EVMRAALECAHRGWGVSCVIGVAASGK+IQTRPFQLITGR+WKGTAFGGWKSR DVP LV QY+ G  P+
Sbjct:    1 MSDSDKGKVIECKAAVAWEANKPLVTETIRVDPPKEGEVRLKVVANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESVGPGVTSVQPGMYVIPCYTPQCKDAACIFCQSPKTNLCPKIRATQGRGVMPDGTSRFSTLDGKPIYHFMGCSTFAEYTVVAEISCAVVSEKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGASVAVFGLGAVGLAVVQAAKIRKARRIFAVDTNPKKFEMAVQLGATDCLNPNDIPDKPIQQVIVEATTWGVDYSFDATGNVEVMRAALECAHRGWGVSCVIGVAASGKLIQTRPFQLITGRSWKGTAFGGWKSRTDVPDLVDQYMDGKLPI 350
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: XP_002500812.1 (formaldehyde dehydrogenase/S-formylglutathione hydrolase [Micromonas commoda] >ACO62070.1 formaldehyde dehydrogenase/S-formylglutathione hydrolase [Micromonas commoda])

HSP 1 Score: 541.2 bits (1393), Expect = 2.400e-150
Identity = 251/344 (72.97%), Postives = 290/344 (84.30%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            GKPI CKAAVAW  N+PL  ET+ V PPKAGE+R+KV+ANALCHTDVYTL GQDPEGLFPCILGHEAGAIVES+G GVTSV PG +VIPCYTPQC +  CI+C SPKTNLCP IRGTQG+GVMPDGT+RF+T+DG+ I+HFMGCSTFAEYTV+AEIS A ++ + PL+K CLFGCGVSTGLGAV  TC V  G++VAVFGLGAVGLAVVQAAKM  A RII +D+N+ KF +A +LG TDC+ P+  G+ P+Q+V+V MT WGVDYSFD TGN +VMRAALECAHRGWG SCVIGVAA+GK I TRPFQL+TGR WKGTAFGGWKSR  VP LV++ L G  P+
Sbjct:  301 GKPITCKAAVAWSANQPLSDETVVVAPPKAGEIRVKVVANALCHTDVYTLEGQDPEGLFPCILGHEAGAIVESVGPGVTSVSPGDHVIPCYTPQCNQPACIFCASPKTNLCPAIRGTQGQGVMPDGTTRFTTVDGKEIFHFMGCSTFAEYTVIAEISAAKINRRMPLNKACLFGCGVSTGLGAVWNTCKVTAGSSVAVFGLGAVGLAVVQAAKMAGASRIIGVDLNKDKFAVASKLGCTDCVCPADHGDTPVQSVIVNMTKWGVDYSFDCTGNVQVMRAALECAHRGWGESCVIGVAAAGKEIATRPFQLVTGRVWKGTAFGGWKSRSSVPRLVERCLAGELPV 644
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: XP_014151470.1 (alcohol dehydrogenase class-3 [Sphaeroforma arctica JP610] >KNC77568.1 alcohol dehydrogenase class-3 [Sphaeroforma arctica JP610])

HSP 1 Score: 530.0 bits (1364), Expect = 5.500e-147
Identity = 250/341 (73.31%), Postives = 290/341 (85.04%), Query Frame = 0 
Query:   10 IECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            I+CKAA+A+  N+PL  E I V  PKAGEVR+KV+ANALCHTD+YTLSGQD EG FPCILGHEAGAIVES+GEGVTSVK G +VIPCYTPQC E  CI+CQSPKTNLCPKIR TQG+GVMPDGTSRF+T+DG+ IYHFMGCSTF+EYTVVAEISCA + ++APL+  CL GCGVSTG GAV++TC VEEG+TVAV+GLGAVGLA +QAA + KA RI AIDMNE KFE A++LGAT+CLNP  F E PI+ V+VE T WGVDY+FDATG+ +VMR+ALE AHRGWGVSCV+GVA +G  I TRPFQL+TGR WKGTAFGGWKSR DVPMLV ++  G  P+
Sbjct:    7 IKCKAAIAYAANEPLKIEEIYVGAPKAGEVRVKVVANALCHTDIYTLSGQDAEGKFPCILGHEAGAIVESVGEGVTSVKVGDHVIPCYTPQCNEDDCIFCQSPKTNLCPKIRSTQGQGVMPDGTSRFTTLDGKPIYHFMGCSTFSEYTVVAEISCAKIVEEAPLEVACLLGCGVSTGFGAVMRTCKVEEGSTVAVWGLGAVGLAAIQAAALNKASRIFAIDMNEGKFEHAKKLGATECLNPKDFDE-PIEKVLVEKTKWGVDYTFDATGSVKVMRSALEAAHRGWGVSCVVGVAPAGAEISTRPFQLVTGRQWKGTAFGGWKSRTDVPMLVDKWQAGDLPI 346
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: OQR97459.1 (hypothetical protein THRCLA_06946 [Thraustotheca clavata])

HSP 1 Score: 529.3 bits (1362), Expect = 9.500e-147
Identity = 249/350 (71.14%), Postives = 294/350 (84.00%), Query Frame = 0 
Query:    1 MSSPHEGKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            + S   GK I CKAAVAW+PN PL  ET+ V PPKAGE+R+KVIANALCHTD+YTLSG+DPEGLFPCILGHEAGA+VES+G GVTSVKPG +VIPCYTP+CQ++ C++C+SPKTNLCP+IR TQGKGVMPDGTSRFS +DG+ IYHFMGCSTF+EY+V+AEIS A +   APLDK+CLFGCGVSTG GAV  T  V  G++VAVFGLGAVGLAV+QAAK+  A+RI AID N  KFEMA +LGATDC++P T   +PIQ V+++ T WG+DY++D TGN EVMRAALE +HRGWG SCVIGVAASG  I+TRPFQLITGRTWKGTAFGG+KSR  VP LV+Q + G  P+
Sbjct:  514 LMSTTAGKVIRCKAAVAWKPNAPLSIETVEVAPPKAGEIRVKVIANALCHTDLYTLSGEDPEGLFPCILGHEAGAVVESVGPGVTSVKPGDHVIPCYTPECQKSDCVFCESPKTNLCPEIRATQGKGVMPDGTSRFS-IDGKPIYHFMGCSTFSEYSVIAEISAAKIDPSAPLDKMCLFGCGVSTGFGAVFNTTKVHPGSSVAVFGLGAVGLAVIQAAKIAGAKRIFAIDSNHSKFEMATKLGATDCIDP-TASSEPIQNVLIQKTKWGIDYTYDCTGNVEVMRAALEASHRGWGESCVIGVAASGHEIKTRPFQLITGRTWKGTAFGGYKSRSQVPKLVEQSMSGELPI 861
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: XP_012207158.1 (S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Saprolegnia parasitica CBS 223.65] >KDO22119.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 527.3 bits (1357), Expect = 3.600e-146
Identity = 250/344 (72.67%), Postives = 292/344 (84.88%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            GK I+CKAAVAW+PN+PL  ET+ V PPKAGE+R+KVIANALCHTD+YTLSG+DPEGLFPCILGHEAGAIVES+G GVTSVKPG +VIPCYTP+CQ++ CI+C+SPKTNLCP+IRGTQGKGVMPDGTSRFS ++G  IYHFMGCSTF+EY+V+AEIS A +   APLDK+CLFGCGVSTG GAV  T  V  G++VAVFGLGAVGLAV+QAAK+  A RI AID N  KFEMA  LGATDCL+P+   E PIQ V+V+ T WG+DY++D TGN EVMRAALE +HRGWG SCVIGVA++G  +QTRPFQLITGRTWKGTAFGG+KSR  VP LV+Q + G  P+
Sbjct:   25 GKVIQCKAAVAWKPNQPLSIETVDVAPPKAGEIRVKVIANALCHTDLYTLSGEDPEGLFPCILGHEAGAIVESVGPGVTSVKPGDHVIPCYTPECQKSDCIFCESPKTNLCPEIRGTQGKGVMPDGTSRFS-INGEPIYHFMGCSTFSEYSVIAEISAAKIDPTAPLDKMCLFGCGVSTGFGAVFNTTKVHPGSSVAVFGLGAVGLAVIQAAKIAGATRIFAIDPNPSKFEMATSLGATDCLDPTALDE-PIQNVLVQKTKWGIDYTYDCTGNVEVMRAALEASHRGWGQSCVIGVASAGHELQTRPFQLITGRTWKGTAFGGYKSRSQVPKLVEQSMAGELPI 366
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: XP_008603959.1 (hypothetical protein SDRG_00268 [Saprolegnia diclina VS20] >XP_008603960.1 hypothetical protein, variant [Saprolegnia diclina VS20] >EQC42536.1 hypothetical protein SDRG_00268 [Saprolegnia diclina VS20] >EQC42537.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 526.9 bits (1356), Expect = 4.700e-146
Identity = 250/344 (72.67%), Postives = 292/344 (84.88%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            GK I+CKAAVAW+PN+PL  ET+ V PPKAGE+R+KVIANALCHTD+YTLSG+DPEGLFPCILGHEAGAIVES+G GVTSVKPG +VIPCYTP+CQ++ CI+C+SPKTNLCP+IRGTQGKGVMPDGTSRFS ++G  IYHFMGCSTF+EY+V+AEIS A +   APLDK+CLFGCGVSTG GAV  T  V  G++VAVFGLGAVGLAV+QAAK+  A RI AID N  KFEMA  LGATDCL+P+   E PIQ V+V+ T WG+DY++D TGN EVMRAALE +HRGWG SCVIGVA++G  +QTRPFQLITGRTWKGTAFGG+KSR  VP LV+Q + G  P+
Sbjct:   25 GKVIQCKAAVAWKPNQPLSIETVDVAPPKAGEIRVKVIANALCHTDLYTLSGEDPEGLFPCILGHEAGAIVESVGPGVTSVKPGDHVIPCYTPECQKSDCIFCESPKTNLCPEIRGTQGKGVMPDGTSRFS-INGEPIYHFMGCSTFSEYSVIAEISAAKIDPTAPLDKMCLFGCGVSTGFGAVFNTTKVHPGSSVAVFGLGAVGLAVIQAAKIAGATRIFAIDPNPAKFEMATSLGATDCLDPTALDE-PIQNVLVQKTKWGIDYTYDCTGNVEVMRAALEASHRGWGQSCVIGVASAGHELQTRPFQLITGRTWKGTAFGGYKSRSQVPKLVEQSMAGELPI 366
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: XP_008870739.1 (S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Aphanomyces invadans] >ETW00604.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Aphanomyces invadans])

HSP 1 Score: 525.8 bits (1353), Expect = 1.000e-145
Identity = 250/344 (72.67%), Postives = 291/344 (84.59%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            G+ I CKAAVAW+PN PL  ETI V PP+AGEVR+KV+ANALCHTD+YTL+G+DPEGLFPCILGHEAGAIVES+G GVTSVKPG +VIPCYTP+CQ+  CI+C+SPKTNLCP+IRGTQGKGVMPDGTSRFS ++G+ +YHFMGCSTF+EY+V+AEIS A +   APLDK+CLFGCG+STG GAV  T  VE G++VAVFG+GAVGLAV+QAAK   A RI AID N  KF MA++LGATDC++P T    PIQ V+VE T WGVDY++D TGNTEVMRAALE +HRGWG SCVIGVAA+G  IQTRPFQLITGRTWKGTAFGG+KSR  VP LVQQ + G  P+
Sbjct:   26 GQVIRCKAAVAWKPNAPLSVETIEVAPPRAGEVRVKVVANALCHTDLYTLNGEDPEGLFPCILGHEAGAIVESVGPGVTSVKPGDHVIPCYTPECQKPECIFCESPKTNLCPEIRGTQGKGVMPDGTSRFS-INGQPLYHFMGCSTFSEYSVIAEISAAKIDPTAPLDKMCLFGCGISTGFGAVFNTTKVEPGSSVAVFGIGAVGLAVIQAAKKAGANRIFAIDPNTSKFAMAQELGATDCIDP-TASNVPIQQVLVEKTKWGVDYTYDCTGNTEVMRAALEASHRGWGESCVIGVAAAGHEIQTRPFQLITGRTWKGTAFGGYKSRTQVPQLVQQSMEGKLPI 367
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: KOO22040.1 (hypothetical protein Ctob_002947 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 525.8 bits (1353), Expect = 1.000e-145
Identity = 252/340 (74.12%), Postives = 282/340 (82.94%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGG 347
            GK I CKAAVA  P +PL  ETI VDPPKAGEVR++VIANALCHTDVYT  G DPEGLFPCILGHEAGAIVES+GEGV+SVKPG +V+PCYTPQC E  CI+C+SPKTNLCP+IRGTQGKG+MPDGT+RF   DG  +YHFMGCSTF+EYTV+A ISCA V   APL+K+CL GCGVSTG GAV  TC VE GA+VAVFG GAVGL+V+QAAK+  A RIIAID+N +KF  AR  GATD +NP    E PIQ  +++MT WGVDYSFD TGNTEVMRAALECAHRGWG SCVIGVAASGK I TRPFQL+TGR W GTAFGGWKSR DVP LV++YL G
Sbjct:  333 GKAITCKAAVALAPKQPLSIETIIVDPPKAGEVRVRVIANALCHTDVYTWEGSDPEGLFPCILGHEAGAIVESVGEGVSSVKPGDHVVPCYTPQCNEPDCIFCRSPKTNLCPRIRGTQGKGLMPDGTTRFKRADGTPLYHFMGCSTFSEYTVLAAISCAKVHTAAPLEKMCLLGCGVSTGWGAVWNTCKVENGASVAVFGCGAVGLSVIQAAKLSGASRIIAIDLNPQKFTAARAFGATDFVNPKDI-EGPIQQHIIKMTQWGVDYSFDCTGNTEVMRAALECAHRGWGTSCVIGVAASGKEISTRPFQLVTGRKWVGTAFGGWKSRSDVPKLVERYLDG 671
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: GAX25987.1 (S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [Fistulifera solaris])

HSP 1 Score: 524.2 bits (1349), Expect = 3.000e-145
Identity = 250/344 (72.67%), Postives = 280/344 (81.40%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            GKPI CKA VA  P +PLV ETI VDPPKAGEVR+KVIANALCHTDVYTL G DPEGLFP ILGHEAG IVES+GEGVTSV PG +VIP YTPQC E  CI+CQSPKTNLCPKIRGTQG+G+MPDGTSRF   DG  IYHFMGCST +EYTV+AEISCA +  +APLDK+CLFGCG+STGLGAV  TC VE G++VAVFGLGAVGLAV+Q A+   A +IIA+D+N  KFEMA+QLGATDC+NP     K    +   MT WGVDY+FD TGN EVMRAALECAHRGWG SCVIGVAASG  I TRPFQL+TGR WKGTAFGG+KSR D+P LV + + G  P+
Sbjct:    6 GKPITCKAMVARGPKQPLVEETITVDPPKAGEVRVKVIANALCHTDVYTLDGHDPEGLFPSILGHEAGCIVESVGEGVTSVAPGDHVIPAYTPQCCEVSCIFCQSPKTNLCPKIRGTQGQGLMPDGTSRFKDKDGNTIYHFMGCSTMSEYTVLAEISCAKIDPQAPLDKMCLFGCGISTGLGAVWNTCKVETGSSVAVFGLGAVGLAVIQGAQKAGASKIIAVDINPSKFEMAKQLGATDCVNPKEVEGKIQSYIAGTMTPWGVDYTFDCTGNVEVMRAALECAHRGWGTSCVIGVAASGHEISTRPFQLVTGRIWKGTAFGGFKSRKDIPKLVDRCMSGELPI 349
[Close]
BLAST of NO24G00660 vs. NCBI_GenBank
Match: GAX24394.1 (S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [Fistulifera solaris])

HSP 1 Score: 524.2 bits (1349), Expect = 3.000e-145
Identity = 250/344 (72.67%), Postives = 280/344 (81.40%), Query Frame = 0 
Query:    7 GKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCHTDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL 351
            GKPI CKA VA  P +PLV ETI VDPPKAGEVR+KVIANALCHTDVYTL G DPEGLFP ILGHEAG IVES+GEGVTSV PG +VIP YTPQC E  CI+CQSPKTNLCPKIRGTQG+G+MPDGTSRF   DG  IYHFMGCST +EYTV+AEISCA +  +APLDK+CLFGCG+STGLGAV  TC VE G++VAVFGLGAVGLAV+Q A+   A +IIA+D+N  KFEMA+QLGATDC+NP     K    +   MT WGVDY+FD TGN EVMRAALECAHRGWG SCVIGVAASG  I TRPFQL+TGR WKGTAFGG+KSR D+P LV + + G  P+
Sbjct:    6 GKPITCKAMVARGPKQPLVEETITVDPPKAGEVRVKVIANALCHTDVYTLDGHDPEGLFPSILGHEAGCIVESVGEGVTSVAPGDHVIPAYTPQCCEVSCIFCQSPKTNLCPKIRGTQGQGLMPDGTSRFKDKDGNTIYHFMGCSTMSEYTVLAEISCAKIDPQAPLDKMCLFGCGISTGLGAVWNTCKVETGSSVAVFGLGAVGLAVIQGAQKAGASKIIAVDINPSKFEMAKQLGATDCVNPKEVEGKIQSYIAGTMTPWGVDYTFDCTGNVEVMRAALECAHRGWGTSCVIGVAASGHEISTRPFQLVTGRIWKGTAFGGFKSRKDIPKLVDRCMSGELPI 349
The following BLAST results are available for this feature:
BLAST of NO24G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21135.11.600e-17886.57Alcohol dehydrogenase GroES-like protein [Nannochl... [more]
XP_002500812.12.400e-15072.97formaldehyde dehydrogenase/S-formylglutathione hyd... [more]
XP_014151470.15.500e-14773.31alcohol dehydrogenase class-3 [Sphaeroforma arctic... [more]
OQR97459.19.500e-14771.14hypothetical protein THRCLA_06946 [Thraustotheca c... [more]
XP_012207158.13.600e-14672.67S-(hydroxymethyl)glutathione dehydrogenase/class I... [more]
XP_008603959.14.700e-14672.67hypothetical protein SDRG_00268 [Saprolegnia dicli... [more]
XP_008870739.11.000e-14572.67S-(hydroxymethyl)glutathione dehydrogenase/class I... [more]
KOO22040.11.000e-14574.12hypothetical protein Ctob_002947 [Chrysochromulina... [more]
GAX25987.13.000e-14572.67S-(hydroxymethyl)glutathione dehydrogenase / alcoh... [more]
GAX24394.13.000e-14572.67S-(hydroxymethyl)glutathione dehydrogenase / alcoh... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL041nonsL041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004832NSK004832Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00660.1NO24G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00660.2NO24G00660.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558426gene_7299Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g29gene9308Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00660.1NO24G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00660.2NO24G00660.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00660 ID=NO24G00660|Name=NO24G00660|organism=Nannochloropsis oceanica|type=gene|length=2055bp
TGGAATAACCTCCCCTCTGTGGCTTGTGCGTGTGTGCCTCGATCATTTGC
TTGCTTTGATGTGTATGTCAGCCTGCACTATACATACGATGATGTTGGCC
CGAAAGGCGACGAAGCTGCTCTCCAACTAACAAAAATCACATGTGACGCG
AAAATGCTGCGTGTTATCGTGCTCACAGACCTGTGTGAGAGGAGGAAAGT
CGTGCACGATAACTTGCACTTGTTCTTCCGCAGCATATAAGCTCGCGTCT
GGCTTAGCCAACTACCGCTTCCACCGCACCACTCACACACACACGCCAGT
CTTGAATCAACCCAAGCCATCTCATGTCCAGTCCGCACGAAGGAAAGCCG
ATCGAGTGTAAAGCGgtgcgttcccattctcctccctcccatcgtattct
atagttccacgcatcacgcctcacgattcaagctgcacacttacacacca
tgcagGCCGTGGCATGGGAACCGAACAAGCCATTGGTTACCGAGACTATC
CGCGTGGACCCACCCAAGGCAGGGGAAGTCCGGCTAAAGGTCATTGCCAA
TGCCTTGTGCCATACCGACGgtgcgtccacaagacacgcaagaaaaggag
agggatggggaaagcttgtgttaaagagagacctgatgtcatggatgctt
gttatctgacgctgtgatgcttgaccaagcggatccagccctccaccctc
gttcacgctccctcttccatcccctccctatgcccgtgcccaccacaaac
ctcgcagTTTACACCTTGTCCGGGCAAGACCCCGAGGGTCTCTTCCCCTG
CATCCTAGGCCACGAAGCAGGGGCTATTGTCGAGAGCATTGGGGAGGGCG
TGACGTCCGTTAAGCCCGGCATGTACGTCATTCCGTGCTACACTCCGCAA
TGCCAAGAAGCCGGTTGCATCTACTGCCAATCCCCCAAGACGAATCTCTG
CCCTAAGATCAGGGGGACGCAGGGAAAAGGAGTCATGCCTGATGGGACTT
CACGGTTCAGTACCATGGATGGGAGGCACATCTACCACTTTATGGGCTGT
TCGACCTTCGCAGAATATACAGTAGTGGCCGAGATCTCCTGTGCGGTGGT
CTCGGACAAGGCGCCGTTGGACAAGGTGTGCTTGTTTGGGTGCGGAGTGA
GCACAGGGCTAGGGGCGGTGCTCAAGACTTGCGCAGTGGAGGAGGGGGCG
ACGGTGGCGGTATTCGGCTTGGGGGCAGTGGGGCTGGCTGTCGTACAGGC
GGCCAAGATGAGGAAAGCGAGGCGGATCATTGCGATAGATATGAACGAGA
AGAAGTTCGAGATGGCGCGGCAGTTGGGGGCAACGGATTGTTTGAATCCT
TCTACATTTGGTGAGAAGCCGATTCAGACGGTGGTGGTGGAGATGACCAC
GTGGGGAGTGGACTACTCGTTTGACGCCACAGGAAACACGGAGGTGATGC
GGGCGGCTTTGGAGTGCGCGCATCGCGGGTGGGGGGTGAGTTGTGTGATC
GGCGTGGCGGCGAGTGGGAAGGTTATTCAGACAAGACCTTTTCAGCTGAT
CACAGGGAGGACATGGAAGGGGACAGCGTTTGGGGGATGGAAGAGTCGAG
TGGATGTGCCGATGCTGGTGCAGCAGTACCTGGGGGGGAGTTACCCATTG
ACCACTACGTGACACATGAGTATGACGGGGTGGACAAGATCAATGACGCG
ATTCACGCCTTGCATGAGGGAAACTGTTTGCGAGCGGTGGTGGCGTATGC
CACGCCTTGAGAGTAGAGAGTAGGTTCGAATAGGCTGAAAGGTTTAGGGT
TGCAGCAGTCAGATCAGTTGACAATATAGTAGTCGGCTGCGAAAGAGCGG
AAAAGGAAAGAATGATCTTCACAAGAGGATAAATACGAATCAGAGACAAC
CTCCCCCAACTTCTCATAGCGAGAGGAGCGAGAGGAGAAAGCGCCTTCGC
ACTTGTGCTGGCACACCGAGAGAGGCGGTGATCATACAAGAGGAAGAAAA
CAATAGTCTGAACTATCGAGCTGGTATTGGTAATGGTATGTACGTCTATG
CTATT
back to top

protein sequence of NO24G00660.1

>NO24G00660.1-protein ID=NO24G00660.1-protein|Name=NO24G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bp
MSSPHEGKPIECKAAVAWEPNKPLVTETIRVDPPKAGEVRLKVIANALCH
TDVYTLSGQDPEGLFPCILGHEAGAIVESIGEGVTSVKPGMYVIPCYTPQ
CQEAGCIYCQSPKTNLCPKIRGTQGKGVMPDGTSRFSTMDGRHIYHFMGC
STFAEYTVVAEISCAVVSDKAPLDKVCLFGCGVSTGLGAVLKTCAVEEGA
TVAVFGLGAVGLAVVQAAKMRKARRIIAIDMNEKKFEMARQLGATDCLNP
STFGEKPIQTVVVEMTTWGVDYSFDATGNTEVMRAALECAHRGWGVSCVI
GVAASGKVIQTRPFQLITGRTWKGTAFGGWKSRVDVPMLVQQYLGGSYPL
TTT*
back to top

protein sequence of NO24G00660.2

>NO24G00660.2-protein ID=NO24G00660.2-protein|Name=NO24G00660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=332bp
MLDQADPALHPRSRSLFHPLPMPVPTTNLAVYTLSGQDPEGLFPCILGHE
AGAIVESIGEGVTSVKPGMYVIPCYTPQCQEAGCIYCQSPKTNLCPKIRG
TQGKGVMPDGTSRFSTMDGRHIYHFMGCSTFAEYTVVAEISCAVVSDKAP
LDKVCLFGCGVSTGLGAVLKTCAVEEGATVAVFGLGAVGLAVVQAAKMRK
ARRIIAIDMNEKKFEMARQLGATDCLNPSTFGEKPIQTVVVEMTTWGVDY
SFDATGNTEVMRAALECAHRGWGVSCVIGVAASGKVIQTRPFQLITGRTW
KGTAFGGWKSRVDVPMLVQQYLGGSYPLTTT*
back to top
Synonyms
Publications