NO24G00580, NO24G00580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00580 vs. NCBI_GenBank
Match: EWM21120.1 (hypothetical protein Naga_100041g26 [Nannochloropsis gaditana]) HSP 1 Score: 563.1 bits (1450), Expect = 7.500e-157 Identity = 282/338 (83.43%), Postives = 309/338 (91.42%), Query Frame = 0 Query: 112 RRIDRAAKTDKARKLSKNARLMDDFFGKRMGAGTVFYGESLSDLDDEAYAKKVEASNDNDARLEIKALRENPVVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSG---EGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRKGNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQALVQDVNNVTFEVKNDDSRQEDQERLNNILSTPDQRQIVEYFLTEDAKDEEMWGQRLSALKPDVL 447 RR+ RAAKTDKARKLSKNARLMDDFFGKR+G G+VFYGE LSDLDDE YA+KVEASNDND RLE++ALR+NPV+VVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLD+FEGNVKDL++LTE +GALAVIYCAGSRE+IG N F QVDGLGVENAVKAA+LSG G PSVRKFILLSSIGVS+P+ YGF+GKLLGDPL+AKARGE AVR+ LESYCIVR GGLRDGDGTKRAIEI QGD+FGKCGVSRLD+AQ+LVQ LVQDVNNVTFEVKNDDSR+EDQ RLN ILST DQRQIVEYFL EDAK+EEMW +RL ALKPD++ Sbjct: 92 RRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII 429
BLAST of NO24G00580 vs. NCBI_GenBank
Match: XP_005840019.1 (hypothetical protein GUITHDRAFT_101482 [Guillardia theta CCMP2712] >EKX53039.1 hypothetical protein GUITHDRAFT_101482 [Guillardia theta CCMP2712]) HSP 1 Score: 127.1 bits (318), Expect = 1.400e-25 Identity = 87/273 (31.87%), Postives = 138/273 (50.55%), Query Frame = 0 Query: 119 KTDKARKLSKNARLMDDFFGKRMGAGTVFYG--ESLSDLDDEAYAKKVEASNDNDARLEIKALRENPVVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRKGNLESYCIVRAGGLRDGDGTKRAIEI---GQGDMFGKCGVSRLDVAQMLVQALVQD 387 K + S + L++D KR G G +FYG E+ + D +A AK+ E + + +R + V+V+G+ TGQW+ + +G + R + DKAED FG DG+NLD++ G+V D + L M+G AVIYC G +F ++ GVE V+ A+ +P+VR+ +L+SS G G L+A+ GE + K L SY I+RAG + + G + I + +M K ++ DVA + + AL+ D Sbjct: 63 KKSSTKSPSFSDDLIEDLTMKRFGNGWIFYGERETTKNKDYDALAKEAE------DLVNQRVIRPDAVLVIGSLSVTGQWMTLKTMEQGLNARILTKEFDKAEDCFGTDGANLDIYYGDVFDDAQLENAMEGIKAVIYCDSGSLPFGETSFERLSKQGVERVVEMAK-----RMPNVRRMVLISSAG----------GVFSNQQLEAQRAGEALLEKAGL-SYLIIRAGKMENKLGGMKNIAVSPCSAQEMPTKATITPADVADVAITALMID 313
BLAST of NO24G00580 vs. NCBI_GenBank
Match: WP_076788984.1 (SDR family NAD(P)-dependent oxidoreductase [Chlorobium sp. KB01]) HSP 1 Score: 116.3 bits (290), Expect = 2.400e-22 Identity = 90/233 (38.63%), Postives = 123/233 (52.79%), Query Frame = 0 Query: 184 VVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRK---GNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQAL-VQDVNNVTFEVKNDDSRQEDQERLNNILS 413 V+V GATG+TGQWVV LL G SVR F R+ DKA LF G N++ G ++ S + +KG AVI GS G ++ ++VD GV V A +G VR F L+SS+ V++ Y + G LK K E+ VRK G S+ IVR GGL+DG+ + + GD ++R DVA++LV +L V+ N TFEV N+ +E Q L S Sbjct: 11 VLVAGATGRTGQWVVKRLLHYGVSVRVFCRDRDKAVSLF---GDNVECVSGVIQSASDIAVAVKGCSAVISALGSGSYSGESSPAEVDRDGVMRLVDEAAKAG------VRHFALVSSLAVTR--WYHPLNLFAGVLLK-KWDAEEHVRKVFSGVDRSFTIVRPGGLKDGEPLLHRLHVDTGDRLWSGWINRSDVAELLVLSLWVEKAKNKTFEVINES--EESQHSLEPFYS 229
BLAST of NO24G00580 vs. NCBI_GenBank
Match: WP_101757854.1 (SDR family NAD(P)-dependent oxidoreductase [Oceanicoccus sp. KOV_DT_Chl]) HSP 1 Score: 115.5 bits (288), Expect = 4.100e-22 Identity = 76/230 (33.04%), Postives = 135/230 (58.70%), Query Frame = 0 Query: 167 SNDNDARLEIKALRENPVVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGS-REVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRKGNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQALVQ-DVNNVTFEV 395 S + AR++ + N ++VVGATGKTG+ +V DL +GF VRA VR+ ++ ++ G D ++L + ++ + L + G A+I AG+ + G T +D G N + A++ +++KF+L+SS+GV++PD F+ ++ + L+ K +GEDA+R ++ +Y IVR GGL D G ++ ++ QGD + R DV+++++ AL+ + + TFEV Sbjct: 31 SQSDSARVD----KNNVILVVGATGKTGRLIVADLQQQGFQVRAMVRDSERGREILGED---VNLVQADLTVAATLPAAVAGVSAIINAAGAGLKGTGKATPEWIDYQGTLNLLAASK------PENIKKFVLISSMGVTQPD--HFLNRIANNVLRWKLKGEDALRASDV-NYTIVRPGGLTDKAGPEQVVQFYQGDTKKGGPIRREDVSRVVIAALLMPEADYKTFEV 244
BLAST of NO24G00580 vs. NCBI_GenBank
Match: WP_010933720.1 (SDR family NAD(P)-dependent oxidoreductase [Chlorobaculum tepidum] >NP_662940.1 hypothetical protein CT2065 [Chlorobaculum tepidum TLS] >AAM73282.1 conserved hypothetical protein [Chlorobaculum tepidum TLS]) HSP 1 Score: 113.2 bits (282), Expect = 2.000e-21 Identity = 81/215 (37.67%), Postives = 111/215 (51.63%), Query Frame = 0 Query: 184 VVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRK---GNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQAL-VQDVNNVTFEV 395 V+V GATGKTG WVV LL G VR FVR +KA LF G +++ G ++D A+ + G AVI GS + G + S+VD G A L E VR F ++SSI V+K + L G L K E+ +RK SY ++R GGLRDG+ + + + QGD ++R DVA++ V +L V+ N TFEV Sbjct: 11 VLVAGATGKTGSWVVKRLLHYGVPVRVFVRCEEKARRLF---GEGVEVVTGKIQDAEAIRRAVSGCDAVISALGSSAMSGEASPSEVDRDG------AIRLIDEAAKAGVRHFAMVSSIAVTK---WFHPLNLFGGVLSMKLAAEEHLRKIFGSEGRSYTVIRPGGLRDGEPLQHRLHVEQGDHLWNGWMNRSDVAELAVLSLWVEKAANKTFEV 213
BLAST of NO24G00580 vs. NCBI_GenBank
Match: KER09808.1 (NAD-dependent epimerase [Chlorobium sp. GBChlB]) HSP 1 Score: 113.2 bits (282), Expect = 2.000e-21 Identity = 85/228 (37.28%), Postives = 122/228 (53.51%), Query Frame = 0 Query: 184 VVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRK---GNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQAL-VQDVNNVTFEVKNDDSRQEDQERL 408 V+V GATG+TG WVV LL G + F R+ K + NL+++ G +++ SA+ ++G AVI G+ E+IG + +QVDG GV V AA +G V+KFIL+SSI V+KP L G L K R E+ +RK N +Y I+R GGL+DGD K ++ +GD + R DV ++ +L + N TFEV + EDQ+ L Sbjct: 10 VLVAGATGRTGLWVVRRLLHYGIKTKTFSRSAAKLSEF-----KNLEVWLGKIQNSSAVAAAVQGCDAVISALGATELIGDASPAQVDGDGVIRLVDAAADAG------VKKFILISSIAVTKP---FHPLNLFGGVLSQKLRAENHIRKIFSENGRTYTIIRPGGLKDGDPFKFKLQFDKGDKITGL-IDRSDVGEIAALSLWIPKATNQTFEVIR--TVAEDQKTL 220
BLAST of NO24G00580 vs. NCBI_GenBank
Match: WP_085660499.1 (SDR family NAD(P)-dependent oxidoreductase [Prosthecochloris sp. HL-130-GSB] >ARM31829.1 NAD-dependent epimerase [Prosthecochloris sp. HL-130-GSB]) HSP 1 Score: 113.2 bits (282), Expect = 2.000e-21 Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 0 Query: 184 VVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRK---GNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQALVQD-VNNVTFEVKNDDSRQEDQERL 408 V+V GATGKTG WVV L G VR VR+ +K E N ++ G V+D + +KG AVI GS ++ G + +VD GV ++ AE + E G R F L+SS+ V+K + L G L K GE+ VR+ + SY IVR GGL+DG+ + +++ QGD +R DVA++LV +L D N TFEV ++D +E Q+ L Sbjct: 11 VLVAGATGKTGTWVVRRLQHYGIPVRVLVRSAEKGERF-----DNAEVVVGRVQDKDDVARAVKGCSAVISALGSSQIAGEASPGEVDRDGV---IRLAEAAAEAG---ARHFGLVSSLAVTK---WYHPLNLFGGVLSMKLAGENRVREIFAQDGRSYTIVRPGGLQDGEPMQYRLKVDQGDRLWNGFTNRSDVAELLVLSLWNDKARNTTFEVVSED--KEPQQSL 222
BLAST of NO24G00580 vs. NCBI_GenBank
Match: WP_006365678.1 (SDR family NAD(P)-dependent oxidoreductase [Chlorobium ferrooxidans] >EAT59546.1 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:NmrA-like [Chlorobium ferrooxidans DSM 13031]) HSP 1 Score: 112.8 bits (281), Expect = 2.700e-21 Identity = 86/233 (36.91%), Postives = 124/233 (53.22%), Query Frame = 0 Query: 184 VVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRK---GNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQAL-VQDVNNVTFEVKNDDSRQEDQERLNNILS 413 V+V G TG+TGQWVV LL G VR F R+ DKA LF G ++ G ++ + + +KG AVI GS G ++ ++VD GV V A +G V+ F L+SS+ V+K Y + G LK K E+ VRK G+ S+ IVR GGL+DG+ + + + GD ++R DVA++LV +L V+ N TFEV N+ +E+Q+ L S Sbjct: 11 VLVAGGTGRTGQWVVKRLLHYGVPVRVFCRDRDKAVSLF---GDRVECVSGVIQSATDIAVAVKGCSAVISALGSGSYSGESSPAEVDRDGVMRLVDEAANAG------VKHFALVSSMAVTK--WYHPLNLFAGVLLK-KWEAEEHVRKVFSGSDRSFTIVRPGGLKDGEPLRHRLHVDTGDRLWSGWINRSDVAELLVLSLWVEKAKNKTFEVINE--VEENQQSLEPFYS 229
BLAST of NO24G00580 vs. NCBI_GenBank
Match: KUK90221.1 (hypothetical protein XE04_1546 [Marinimicrobia bacterium 46_43]) HSP 1 Score: 111.7 bits (278), Expect = 5.900e-21 Identity = 84/228 (36.84%), Postives = 127/228 (55.70%), Query Frame = 0 Query: 179 LRENPVVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSK-PDGYGFVGKLLGDPLKAKARGEDAVRKGNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQAL-VQDVNNVTFE-VKNDDSRQED 404 + EN +++ GATG+TG+ +V L+ +G R +R+ E+LF GS++ G+V+ + +L M G VI GSR +G N +VD GV N V+ A +G VR+FIL+SSI V+ GK+L LK GED +R+ L+ Y I+R GGL+D DG K+++ + QGD +SR DVA + + AL D +TFE V++DD ++ Sbjct: 1 MNEN-ILIAGATGQTGRIIVQKLIDRGDRPRVLIRDQALVENLF---GSHVQAMIGDVRQIESLLPAMDGIDTVISAIGSRTPVGKNCPKRVDYQGVANLVQTALDAG------VRRFILISSISVTNLQHPMNCFGKILAYKLK----GEDILRESGLD-YLIIRPGGLKDTDGGKKSLILDQGDRIAGT-ISRSDVAALCLFALDYPDELRLTFEAVESDDESPQN 212
BLAST of NO24G00580 vs. NCBI_GenBank
Match: WP_069810820.1 (SDR family NAD(P)-dependent oxidoreductase [Chlorobaculum limnaeum] >AOS84628.1 NAD-dependent epimerase [Chlorobaculum limnaeum]) HSP 1 Score: 111.3 bits (277), Expect = 7.800e-21 Identity = 79/215 (36.74%), Postives = 112/215 (52.09%), Query Frame = 0 Query: 184 VVVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDLFEGNVKDLSALTEVMKGALAVIYCAGSREVIGTNTFSQVDGLGVENAVKAAELSGEGGVPSVRKFILLSSIGVSKPDGYGFVGKLLGDPLKAKARGEDAVRK---GNLESYCIVRAGGLRDGDGTKRAIEIGQGDMFGKCGVSRLDVAQMLVQAL-VQDVNNVTFEV 395 V+V GATGKTG WVV LL G VR FVR+ +KA +F G +++ G ++D ++ + G AVI GS V G + S+VD G A L E VR F ++SSI V+K + L G L K E+ +RK ++ I+R GGLRDG+ + + + QGD ++R DVA++ V +L V+ N TFEV Sbjct: 11 VLVAGATGKTGSWVVRRLLHHGVPVRVFVRSEEKARSMF---GDAVEVAIGKIQDAESIARAVSGCDAVISALGSSSVSGEASPSEVDRDG------AIRLMDEAAKAGVRHFAMVSSIAVTK---WYHPLNLFGGVLSMKHAAEEHLRKIFASEGRTHTIIRPGGLRDGEPLQHRLHVEQGDHLWNGWMNRSDVAELAVLSLWVEKAANKTFEV 213 The following BLAST results are available for this feature:
BLAST of NO24G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00580 ID=NO24G00580|Name=NO24G00580|organism=Nannochloropsis oceanica|type=gene|length=1341bpback to top protein sequence of NO24G00580.1 >NO24G00580.1-protein ID=NO24G00580.1-protein|Name=NO24G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bpback to top Synonyms
Publications
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